RNA–Protein interactions for RNA: ENST00000562875.5

KARS-203, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 3

Gene KARS, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-203ENST00000562875 PDS5BQ9NTI5 1447 aa11.29□□□□□ -0.6
KARS-203ENST00000562875 A6NJR5 290 aa11.29□□□□□ -0.6
KARS-203ENST00000562875 EVA1BQ9NVM1 165 aa11.29□□□□□ -0.6
KARS-203ENST00000562875 CCDC18Q5T9S5 1454 aa11.29□□□□□ -0.6
KARS-203ENST00000562875 GCC2Q8IWJ2 1684 aa11.28□□□□□ -0.6
KARS-203ENST00000562875 ABL2P42684 1182 aa11.28□□□□□ -0.6
KARS-203ENST00000562875 FCF1Q9Y324 198 aaKnown RBP11.28□□□□□ -0.6
KARS-203ENST00000562875 PHLDB1Q86UU1 1377 aa11.28□□□□□ -0.6
KARS-203ENST00000562875 PPEF1O14829 653 aaPredicted RBP11.27□□□□□ -0.61
KARS-203ENST00000562875 KCNH2Q12809 1159 aa11.27□□□□□ -0.61
KARS-203ENST00000562875 GAPVD1Q14C86 1478 aa11.26□□□□□ -0.61
KARS-203ENST00000562875 GGCXP38435 758 aa11.26□□□□□ -0.61
KARS-203ENST00000562875 PROSER2Q86WR7 435 aaPredicted RBP11.26□□□□□ -0.61
KARS-203ENST00000562875 MTUS2Q5JR59 1369 aa11.26□□□□□ -0.61
KARS-203ENST00000562875 SNAPC4Q5SXM2 1469 aa11.25□□□□□ -0.61
KARS-203ENST00000562875 PNMA1Q8ND90 353 aa11.25□□□□□ -0.61
KARS-203ENST00000562875 FGD6Q6ZV73 1430 aa11.25□□□□□ -0.61
KARS-203ENST00000562875 URB2Q14146 1524 aaKnown RBP11.25□□□□□ -0.61
KARS-203ENST00000562875 PTPN23Q9H3S7 1636 aa11.24□□□□□ -0.61
KARS-203ENST00000562875 RNF223E7ERA6 249 aa11.24□□□□□ -0.61
KARS-203ENST00000562875 PPP1R18Q6NYC8 613 aa11.24□□□□□ -0.61
KARS-203ENST00000562875 NESP48681 1621 aa11.24□□□□□ -0.61
KARS-203ENST00000562875 TRAK2O60296 914 aa11.22□□□□□ -0.61
KARS-203ENST00000562875 GPR37L1O60883 481 aa11.22□□□□□ -0.61
KARS-203ENST00000562875 PTCRAQ6ISU1 281 aaPredicted RBP11.22□□□□□ -0.61
KARS-203ENST00000562875 WWC1Q8IX03 1113 aa11.22□□□□□ -0.61
KARS-203ENST00000562875 UNC93B1Q9H1C4 597 aa11.22□□□□□ -0.61
KARS-203ENST00000562875 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.22□□□□□ -0.61
KARS-203ENST00000562875 FKBPLQ9UIM3 349 aa11.22□□□□□ -0.61
KARS-203ENST00000562875 TARBP1Q13395 1621 aaKnown RBP11.21□□□□□ -0.61
KARS-203ENST00000562875 IQGAP2Q13576 1575 aa11.21□□□□□ -0.61
KARS-203ENST00000562875 FNBP4Q8N3X1 1017 aaPredicted RBP11.21□□□□□ -0.61
KARS-203ENST00000562875 ANKLE1Q8NAG6 615 aa11.21□□□□□ -0.61
KARS-203ENST00000562875 PLA2G2EQ9NZK7 142 aa11.21□□□□□ -0.61
KARS-203ENST00000562875 GRIN2BQ13224 1484 aa11.2□□□□□ -0.62
KARS-203ENST00000562875 MYOM3Q5VTT5 1437 aa11.2□□□□□ -0.62
KARS-203ENST00000562875 TONSLQ96HA7 1378 aa11.2□□□□□ -0.62
KARS-203ENST00000562875 IRF5Q13568 498 aa11.2□□□□□ -0.62
KARS-203ENST00000562875 IFFO2Q5TF58 517 aa11.2□□□□□ -0.62
KARS-203ENST00000562875 UACAQ9BZF9 1416 aa11.19□□□□□ -0.62
KARS-203ENST00000562875 ARMC2Q8NEN0 867 aa11.19□□□□□ -0.62
KARS-203ENST00000562875 ADAMTS12P58397 1594 aa11.19□□□□□ -0.62
KARS-203ENST00000562875 NCOA2Q15596 1464 aa11.19□□□□□ -0.62
KARS-203ENST00000562875 HFM1A2PYH4 1435 aa11.18□□□□□ -0.62
KARS-203ENST00000562875 ZNF330Q9Y3S2 320 aaPredicted RBP11.18□□□□□ -0.62
KARS-203ENST00000562875 UGGT2Q9NYU1 1516 aa11.18□□□□□ -0.62
KARS-203ENST00000562875 ZC3H4Q9UPT8 1303 aaKnown RBP11.17□□□□□ -0.62
KARS-203ENST00000562875 PLA2G2CQ5R387 149 aa11.16□□□□□ -0.62
KARS-203ENST00000562875 NBPF14Q5TI25 921 aa11.16□□□□□ -0.62
KARS-203ENST00000562875 ZBTB24O43167 697 aaPredicted RBP11.15□□□□□ -0.62
KARS-203ENST00000562875 WASHC4Q2M389 1173 aa11.15□□□□□ -0.62
KARS-203ENST00000562875 GPKOWQ92917 476 aaPredicted RBP eCLIP11.15□□□□□ -0.62
KARS-203ENST00000562875 ITSN2Q9NZM3 1697 aa11.14□□□□□ -0.63
KARS-203ENST00000562875 ANP32CO43423 234 aa11.14□□□□□ -0.63
KARS-203ENST00000562875 VAC14Q08AM6 782 aa11.14□□□□□ -0.63
KARS-203ENST00000562875 LINC01559Q495D7 138 aa11.14□□□□□ -0.63
KARS-203ENST00000562875 BAP1Q92560 729 aa11.14□□□□□ -0.63
KARS-203ENST00000562875 ZNF777Q9ULD5 760 aaPredicted RBP11.14□□□□□ -0.63
KARS-203ENST00000562875 AKNAQ7Z591 1439 aa11.14□□□□□ -0.63
KARS-203ENST00000562875 POLR1AO95602 1720 aaPredicted RBP11.14□□□□□ -0.63
KARS-203ENST00000562875 TCOF1Q13428 1488 aaKnown RBP11.13□□□□□ -0.63
KARS-203ENST00000562875 ADGBQ8N7X0 1667 aa11.13□□□□□ -0.63
KARS-203ENST00000562875 ARHGEF11O15085 1522 aa11.13□□□□□ -0.63
KARS-203ENST00000562875 ARID3CA6NKF2 412 aa11.12□□□□□ -0.63
KARS-203ENST00000562875 ZBBXA8MT70 800 aa11.12□□□□□ -0.63
KARS-203ENST00000562875 PDXDC2PQ6P474 469 aa11.12□□□□□ -0.63
KARS-203ENST00000562875 MRC2Q9UBG0 1479 aa11.12□□□□□ -0.63
KARS-203ENST00000562875 MIA2Q96PC5 1412 aa11.11□□□□□ -0.63
KARS-203ENST00000562875 A0A0G2JS52 829 aa11.11□□□□□ -0.63
KARS-203ENST00000562875 POM121CA8CG34 1229 aa11.11□□□□□ -0.63
KARS-203ENST00000562875 CCER2I3L3R5 266 aa11.11□□□□□ -0.63
KARS-203ENST00000562875 NEFLP07196 543 aa11.11□□□□□ -0.63
KARS-203ENST00000562875 FBXO45P0C2W1 286 aa11.11□□□□□ -0.63
KARS-203ENST00000562875 PTK2Q05397 1052 aa11.11□□□□□ -0.63
KARS-203ENST00000562875 TRIM32Q13049 653 aa11.11□□□□□ -0.63
KARS-203ENST00000562875 NR1H3Q13133 447 aa11.11□□□□□ -0.63
KARS-203ENST00000562875 TDRD9Q8NDG6 1382 aaKnown RBP11.11□□□□□ -0.63
KARS-203ENST00000562875 WDR62O43379 1518 aa11.1□□□□□ -0.63
KARS-203ENST00000562875 PPP1R15AO75807 674 aaPredicted RBP11.1□□□□□ -0.63
KARS-203ENST00000562875 ZNF511Q8NB15 262 aa11.1□□□□□ -0.63
KARS-203ENST00000562875 RPIAP49247 311 aa11.09□□□□□ -0.63
KARS-203ENST00000562875 SIN3AQ96ST3 1273 aa11.09□□□□□ -0.63
KARS-203ENST00000562875 GPSM3Q9Y4H4 160 aa11.09□□□□□ -0.63
KARS-203ENST00000562875 EPRSP07814 1512 aaKnown RBP11.09□□□□□ -0.63
KARS-203ENST00000562875 NAIPQ13075 1403 aa11.09□□□□□ -0.63
KARS-203ENST00000562875 AGERQ15109 404 aa11.08□□□□□ -0.64
KARS-203ENST00000562875 LIAT1Q6ZQX7 453 aa11.08□□□□□ -0.64
KARS-203ENST00000562875 SH3BP5LQ7L8J4 393 aa11.08□□□□□ -0.64
KARS-203ENST00000562875 ARHGAP9Q9BRR9 750 aa11.08□□□□□ -0.64
KARS-203ENST00000562875 SUPT16HQ9Y5B9 1047 aaKnown RBP11.08□□□□□ -0.64
KARS-203ENST00000562875 DNMT1P26358 1616 aaKnown RBP11.08□□□□□ -0.64
KARS-203ENST00000562875 RAPGEF6Q8TEU7 1601 aa11.08□□□□□ -0.64
KARS-203ENST00000562875 KIAA0556O60303 1618 aa11.07□□□□□ -0.64
KARS-203ENST00000562875 SH3BP2P78314 561 aa11.07□□□□□ -0.64
KARS-203ENST00000562875 DDX10Q13206 875 aaKnown RBP11.07□□□□□ -0.64
KARS-203ENST00000562875 FOXJ1Q92949 421 aa11.07□□□□□ -0.64
KARS-203ENST00000562875 OCSTAMPQ9BR26 566 aa11.07□□□□□ -0.64
KARS-203ENST00000562875 IFT140Q96RY7 1462 aa11.06□□□□□ -0.64
KARS-203ENST00000562875 MAGEB6P1A0A0J9YX57 407 aa11.06□□□□□ -0.64
KARS-203ENST00000562875 CD2BP2O95400 341 aaKnown RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms