RNA–Protein interactions for RNA: ENST00000561743.5

USB1-205, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 3 BASIC

Gene USB1, Length 1,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-205ENST00000561743 AXIN2Q9Y2T1 843 aa19.08■□□□□ 0.64
USB1-205ENST00000561743 EDC4Q6P2E9 1401 aaKnown RBP19.08■□□□□ 0.64
USB1-205ENST00000561743 SOX12O15370 315 aa19.07■□□□□ 0.64
USB1-205ENST00000561743 BAG6P46379 1132 aa19.06■□□□□ 0.64
USB1-205ENST00000561743 HDGFL2Q7Z4V5 671 aaPredicted RBP19.06■□□□□ 0.64
USB1-205ENST00000561743 DISP2A7MBM2 1401 aa19.06■□□□□ 0.64
USB1-205ENST00000561743 USP47Q96K76 1375 aa19.06■□□□□ 0.64
USB1-205ENST00000561743 PEAK1Q9H792 1746 aa19.05■□□□□ 0.64
USB1-205ENST00000561743 NME9Q86XW9 330 aa19.05■□□□□ 0.64
USB1-205ENST00000561743 NINLQ9Y2I6 1382 aa19.05■□□□□ 0.64
USB1-205ENST00000561743 SRCAPQ6ZRS2 3230 aa19.04■□□□□ 0.64
USB1-205ENST00000561743 WDR17Q8IZU2 1322 aa19.04■□□□□ 0.64
USB1-205ENST00000561743 FAM196AQ6ZSG2 479 aa19.04■□□□□ 0.64
USB1-205ENST00000561743 TERF2IPQ9NYB0 399 aa19.04■□□□□ 0.64
USB1-205ENST00000561743 SBF2Q86WG5 1849 aa19.04■□□□□ 0.64
USB1-205ENST00000561743 PDE3BQ13370 1112 aa19.03■□□□□ 0.64
USB1-205ENST00000561743 TOM1L2Q6ZVM7 507 aa19.03■□□□□ 0.64
USB1-205ENST00000561743 CLSPNQ9HAW4 1339 aa19.02■□□□□ 0.64
USB1-205ENST00000561743 OVOS2A0A0J9YW53 1432 aa19.02■□□□□ 0.64
USB1-205ENST00000561743 OVOS2Q6IE36 1432 aa19.02■□□□□ 0.64
USB1-205ENST00000561743 RREB1Q92766 1687 aa19.01■□□□□ 0.63
USB1-205ENST00000561743 SLC24A1O60721 1099 aa19.01■□□□□ 0.63
USB1-205ENST00000561743 TRIM37O94972 964 aa19.01■□□□□ 0.63
USB1-205ENST00000561743 EN1Q05925 392 aaPredicted RBP19.01■□□□□ 0.63
USB1-205ENST00000561743 PCGF6Q9BYE7 350 aa19.01■□□□□ 0.63
USB1-205ENST00000561743 MYOM1P52179 1685 aa18.99■□□□□ 0.63
USB1-205ENST00000561743 TIMELESSQ9UNS1 1208 aa18.99■□□□□ 0.63
USB1-205ENST00000561743 NUP188Q5SRE5 1749 aa18.97■□□□□ 0.63
USB1-205ENST00000561743 ANKRD36BQ8N2N9 1353 aa18.97■□□□□ 0.63
USB1-205ENST00000561743 CSB-PGBD3P0DP91 1061 aa18.97■□□□□ 0.63
USB1-205ENST00000561743 CARD10Q9BWT7 1032 aa18.97■□□□□ 0.63
USB1-205ENST00000561743 OVOS2A0A0G2JMS6 1433 aa18.97■□□□□ 0.63
USB1-205ENST00000561743 FAM208AQ9UK61 1670 aaKnown RBP18.96■□□□□ 0.63
USB1-205ENST00000561743 KIF20BQ96Q89 1820 aa18.96■□□□□ 0.63
USB1-205ENST00000561743 TMF1P82094 1093 aa18.96■□□□□ 0.63
USB1-205ENST00000561743 LRP5O75197 1615 aa18.96■□□□□ 0.63
USB1-205ENST00000561743 RGPD3A6NKT7 1758 aaPredicted RBP18.96■□□□□ 0.63
USB1-205ENST00000561743 RGPD4Q7Z3J3 1758 aa18.96■□□□□ 0.63
USB1-205ENST00000561743 EZH2Q15910 746 aaKnown RBP18.95■□□□□ 0.62
USB1-205ENST00000561743 DDB1Q16531 1140 aa18.95■□□□□ 0.62
USB1-205ENST00000561743 CAMKK2Q96RR4 588 aa18.95■□□□□ 0.62
USB1-205ENST00000561743 ERBB3P21860 1342 aa18.95■□□□□ 0.62
USB1-205ENST00000561743 CCDC7Q96M83 1385 aa18.94■□□□□ 0.62
USB1-205ENST00000561743 APBA3O96018 575 aa18.94■□□□□ 0.62
USB1-205ENST00000561743 CDCA7Q9BWT1 371 aaPredicted RBP18.94■□□□□ 0.62
USB1-205ENST00000561743 PARD3Q8TEW0 1356 aa18.93■□□□□ 0.62
USB1-205ENST00000561743 PSDA5PKW4 1024 aaPredicted RBP18.92■□□□□ 0.62
USB1-205ENST00000561743 C11orf95C9JLR9 678 aaPredicted RBP18.92■□□□□ 0.62
USB1-205ENST00000561743 RGPD2P0DJD1 1756 aa18.91■□□□□ 0.62
USB1-205ENST00000561743 TNS2Q63HR2 1409 aa18.91■□□□□ 0.62
USB1-205ENST00000561743 MARCH10Q8NA82 808 aaPredicted RBP18.9■□□□□ 0.62
USB1-205ENST00000561743 COG3Q96JB2 828 aa18.9■□□□□ 0.62
USB1-205ENST00000561743 BCL9O00512 1426 aa18.9■□□□□ 0.62
USB1-205ENST00000561743 CDCA8Q53HL2 280 aa18.89■□□□□ 0.61
USB1-205ENST00000561743 ANKRD24Q8TF21 1146 aa18.89■□□□□ 0.61
USB1-205ENST00000561743 NLRP2Q9NX02 1062 aa18.88■□□□□ 0.61
USB1-205ENST00000561743 NHSQ6T4R5 1651 aa18.87■□□□□ 0.61
USB1-205ENST00000561743 IP6K1Q92551 441 aa18.87■□□□□ 0.61
USB1-205ENST00000561743 MAP3K19Q56UN5 1328 aa18.86■□□□□ 0.61
USB1-205ENST00000561743 EXOC5O00471 708 aa18.86■□□□□ 0.61
USB1-205ENST00000561743 FYB1O15117 783 aa18.86■□□□□ 0.61
USB1-205ENST00000561743 FBLN1P23142 703 aa18.86■□□□□ 0.61
USB1-205ENST00000561743 R3HDM1Q15032 1099 aaKnown RBP18.86■□□□□ 0.61
USB1-205ENST00000561743 PTF1AQ7RTS3 328 aa18.85■□□□□ 0.61
USB1-205ENST00000561743 CCER1Q8TC90 406 aaPredicted RBP18.85■□□□□ 0.61
USB1-205ENST00000561743 BCL11BQ9C0K0 894 aaPredicted RBP18.84■□□□□ 0.61
USB1-205ENST00000561743 GGNBP2Q9H3C7 697 aa18.84■□□□□ 0.61
USB1-205ENST00000561743 SHANK3Q9BYB0 1731 aa18.83■□□□□ 0.61
USB1-205ENST00000561743 IL2RBP14784 551 aa18.83■□□□□ 0.6
USB1-205ENST00000561743 HOXC9P31274 260 aa18.83■□□□□ 0.6
USB1-205ENST00000561743 RTL1A6NKG5 1358 aa18.82■□□□□ 0.6
USB1-205ENST00000561743 NSD3Q9BZ95 1437 aa18.82■□□□□ 0.6
USB1-205ENST00000561743 ANKRD26Q9UPS8 1709 aa18.81■□□□□ 0.6
USB1-205ENST00000561743 PLSCR1O15162 318 aa18.81■□□□□ 0.6
USB1-205ENST00000561743 AMPHP49418 695 aa18.81■□□□□ 0.6
USB1-205ENST00000561743 LTV1Q96GA3 475 aaPredicted RBP18.81■□□□□ 0.6
USB1-205ENST00000561743 CARD14Q9BXL6 1004 aa18.81■□□□□ 0.6
USB1-205ENST00000561743 BTAF1O14981 1849 aa18.81■□□□□ 0.6
USB1-205ENST00000561743 RRS1Q15050 365 aaKnown RBP18.8■□□□□ 0.6
USB1-205ENST00000561743 MAP2P11137 1827 aaKnown RBP18.78■□□□□ 0.6
USB1-205ENST00000561743 KAT6BQ8WYB5 2073 aa18.78■□□□□ 0.6
USB1-205ENST00000561743 NBPF14Q5TI25 921 aa18.77■□□□□ 0.6
USB1-205ENST00000561743 DOT1LQ8TEK3 1739 aa18.77■□□□□ 0.59
USB1-205ENST00000561743 KCNQ2O43526 872 aa18.76■□□□□ 0.59
USB1-205ENST00000561743 CASZ1Q86V15 1759 aa18.76■□□□□ 0.59
USB1-205ENST00000561743 MEGF6O75095 1541 aa18.75■□□□□ 0.59
USB1-205ENST00000561743 HSPA5P11021 654 aaKnown RBP18.75■□□□□ 0.59
USB1-205ENST00000561743 EIF4G2P78344 907 aaKnown RBP eCLIP18.75■□□□□ 0.59
USB1-205ENST00000561743 PROM2Q8N271 834 aa18.75■□□□□ 0.59
USB1-205ENST00000561743 FLT4P35916 1363 aa18.74■□□□□ 0.59
USB1-205ENST00000561743 KIF24Q5T7B8 1368 aa18.74■□□□□ 0.59
USB1-205ENST00000561743 ACSBG1Q96GR2 724 aa18.74■□□□□ 0.59
USB1-205ENST00000561743 SMG6Q86US8 1419 aaKnown RBP18.74■□□□□ 0.59
USB1-205ENST00000561743 INSRP06213 1382 aa18.73■□□□□ 0.59
USB1-205ENST00000561743 ANO8Q9HCE9 1232 aaPredicted RBP18.73■□□□□ 0.59
USB1-205ENST00000561743 PAPPAQ13219 1627 aa18.72■□□□□ 0.59
USB1-205ENST00000561743 NBPF6Q5VWK0 638 aa18.72■□□□□ 0.59
USB1-205ENST00000561743 NBPF4Q96M43 638 aa18.72■□□□□ 0.59
USB1-205ENST00000561743 POLR3GLQ9BT43 218 aa18.72■□□□□ 0.59
USB1-205ENST00000561743 TXNRD1Q16881 649 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 498.6 ms