RNA–Protein interactions for RNA: ENST00000561643.5

NEIL1-202, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 3,271 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-202ENST00000561643 TXNDC2Q86VQ3 553 aa13.8□□□□□ -0.2
NEIL1-202ENST00000561643 TBC1D2Q9BYX2 928 aa13.8□□□□□ -0.2
NEIL1-202ENST00000561643 BCL11BQ9C0K0 894 aaPredicted RBP13.8□□□□□ -0.2
NEIL1-202ENST00000561643 PPIP5K1Q6PFW1 1433 aa13.8□□□□□ -0.2
NEIL1-202ENST00000561643 ZNF428Q96B54 188 aa13.8□□□□□ -0.2
NEIL1-202ENST00000561643 ZRANB1Q9UGI0 708 aa13.79□□□□□ -0.2
NEIL1-202ENST00000561643 AGLP35573 1532 aa13.79□□□□□ -0.2
NEIL1-202ENST00000561643 EDC4Q6P2E9 1401 aaKnown RBP13.79□□□□□ -0.2
NEIL1-202ENST00000561643 C22orf23Q9BZE7 217 aa13.79□□□□□ -0.2
NEIL1-202ENST00000561643 COG3Q96JB2 828 aa13.79□□□□□ -0.2
NEIL1-202ENST00000561643 SPATA31D1Q6ZQQ2 1576 aa13.79□□□□□ -0.2
NEIL1-202ENST00000561643 GNAI1P63096 354 aa13.78□□□□□ -0.2
NEIL1-202ENST00000561643 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.78□□□□□ -0.2
NEIL1-202ENST00000561643 NUDT16Q96DE0 195 aaKnown RBP13.78□□□□□ -0.2
NEIL1-202ENST00000561643 ELL2O00472 640 aaPredicted RBP13.78□□□□□ -0.2
NEIL1-202ENST00000561643 HSP90AA1P07900 732 aaKnown RBP13.78□□□□□ -0.2
NEIL1-202ENST00000561643 IL13P35225 146 aa13.78□□□□□ -0.2
NEIL1-202ENST00000561643 FGD1P98174 961 aa13.78□□□□□ -0.2
NEIL1-202ENST00000561643 METP08581 1390 aa13.78□□□□□ -0.2
NEIL1-202ENST00000561643 DIP2BQ9P265 1576 aa13.78□□□□□ -0.2
NEIL1-202ENST00000561643 LNPKQ9C0E8 428 aa13.77□□□□□ -0.2
NEIL1-202ENST00000561643 VAMP4O75379 141 aa13.77□□□□□ -0.21
NEIL1-202ENST00000561643 CPSF1Q10570 1443 aaKnown RBP13.77□□□□□ -0.21
NEIL1-202ENST00000561643 REREQ9P2R6 1566 aa13.77□□□□□ -0.21
NEIL1-202ENST00000561643 NCKAP5LQ9HCH0 1330 aa13.77□□□□□ -0.21
NEIL1-202ENST00000561643 RRS1Q15050 365 aaKnown RBP13.77□□□□□ -0.21
NEIL1-202ENST00000561643 TSPYL6Q8N831 410 aa13.77□□□□□ -0.21
NEIL1-202ENST00000561643 SPRYD3Q8NCJ5 442 aa13.77□□□□□ -0.21
NEIL1-202ENST00000561643 IFT57Q9NWB7 429 aa13.77□□□□□ -0.21
NEIL1-202ENST00000561643 NUCB1Q02818 461 aa13.76□□□□□ -0.21
NEIL1-202ENST00000561643 CCDC61Q9Y6R9 512 aa13.76□□□□□ -0.21
NEIL1-202ENST00000561643 MAP2P11137 1827 aaKnown RBP13.76□□□□□ -0.21
NEIL1-202ENST00000561643 BRPF1P55201 1214 aaPredicted RBP13.76□□□□□ -0.21
NEIL1-202ENST00000561643 ANTXR1Q9H6X2 564 aa13.76□□□□□ -0.21
NEIL1-202ENST00000561643 MRPL50Q8N5N7 158 aaKnown RBP13.75□□□□□ -0.21
NEIL1-202ENST00000561643 CHMP4BQ9H444 224 aaKnown RBP13.75□□□□□ -0.21
NEIL1-202ENST00000561643 MBIPQ9NS73 344 aa13.75□□□□□ -0.21
NEIL1-202ENST00000561643 LMOD3Q0VAK6 560 aa13.75□□□□□ -0.21
NEIL1-202ENST00000561643 CDK12Q9NYV4 1490 aaPredicted RBP13.75□□□□□ -0.21
NEIL1-202ENST00000561643 CHD1LQ86WJ1 897 aa13.75□□□□□ -0.21
NEIL1-202ENST00000561643 SETD1AO15047 1707 aaKnown RBP13.75□□□□□ -0.21
NEIL1-202ENST00000561643 C1orf115Q9H7X2 142 aa13.74□□□□□ -0.21
NEIL1-202ENST00000561643 AATKQ6ZMQ8 1374 aa13.74□□□□□ -0.21
NEIL1-202ENST00000561643 RRP9O43818 475 aaKnown RBP13.74□□□□□ -0.21
NEIL1-202ENST00000561643 HDGFP51858 240 aaKnown RBP13.74□□□□□ -0.21
NEIL1-202ENST00000561643 TWISTNBQ3B726 338 aaPredicted RBP13.74□□□□□ -0.21
NEIL1-202ENST00000561643 ARHGAP45Q92619 1136 aa13.74□□□□□ -0.21
NEIL1-202ENST00000561643 ZBTB7BO15156 539 aaPredicted RBP13.73□□□□□ -0.21
NEIL1-202ENST00000561643 L1TD1Q5T7N2 865 aaKnown RBP13.73□□□□□ -0.21
NEIL1-202ENST00000561643 ANKRD45Q5TZF3 282 aa13.73□□□□□ -0.21
NEIL1-202ENST00000561643 FAM83GA6ND36 823 aa13.72□□□□□ -0.21
NEIL1-202ENST00000561643 ZNF853P0CG23 659 aa13.72□□□□□ -0.21
NEIL1-202ENST00000561643 CFAP44Q96MT7 982 aa13.72□□□□□ -0.21
NEIL1-202ENST00000561643 NRXN3Q9Y4C0 1643 aa13.72□□□□□ -0.21
NEIL1-202ENST00000561643 PTCH1Q13635 1447 aa13.71□□□□□ -0.21
NEIL1-202ENST00000561643 CPS1P31327 1500 aa13.71□□□□□ -0.21
NEIL1-202ENST00000561643 DCTN1Q14203 1278 aa13.71□□□□□ -0.21
NEIL1-202ENST00000561643 C8orf58Q8NAV2 365 aa13.71□□□□□ -0.21
NEIL1-202ENST00000561643 GCC1Q96CN9 775 aa13.71□□□□□ -0.21
NEIL1-202ENST00000561643 HSCBQ8IWL3 235 aa13.71□□□□□ -0.22
NEIL1-202ENST00000561643 ZNF692Q9BU19 519 aaPredicted RBP13.71□□□□□ -0.22
NEIL1-202ENST00000561643 PANK2Q9BZ23 570 aa13.7□□□□□ -0.22
NEIL1-202ENST00000561643 PIK3R4Q99570 1358 aa13.7□□□□□ -0.22
NEIL1-202ENST00000561643 SIRT1Q96EB6 747 aa13.7□□□□□ -0.22
NEIL1-202ENST00000561643 API5Q9BZZ5 524 aaKnown RBP13.7□□□□□ -0.22
NEIL1-202ENST00000561643 ABCC4O15439 1325 aa13.69□□□□□ -0.22
NEIL1-202ENST00000561643 PRR36Q9H6K5 1346 aa13.69□□□□□ -0.22
NEIL1-202ENST00000561643 CEBPAP49715 358 aaPredicted RBP13.69□□□□□ -0.22
NEIL1-202ENST00000561643 BMP2KLQ5H9B9 411 aa13.69□□□□□ -0.22
NEIL1-202ENST00000561643 XRCC6P12956 609 aaKnown RBP eCLIP13.68□□□□□ -0.22
NEIL1-202ENST00000561643 NUTM2FA1L443 756 aa13.68□□□□□ -0.22
NEIL1-202ENST00000561643 SULT6B1Q6IMI4 303 aa13.68□□□□□ -0.22
NEIL1-202ENST00000561643 AEBP1Q8IUX7 1158 aa13.68□□□□□ -0.22
NEIL1-202ENST00000561643 GZF1Q9H116 711 aaPredicted RBP13.68□□□□□ -0.22
NEIL1-202ENST00000561643 CHMP5Q9NZZ3 219 aa13.68□□□□□ -0.22
NEIL1-202ENST00000561643 TECPR2O15040 1411 aa13.68□□□□□ -0.22
NEIL1-202ENST00000561643 CLCN1P35523 988 aa13.68□□□□□ -0.22
NEIL1-202ENST00000561643 TNRQ92752 1358 aa13.67□□□□□ -0.22
NEIL1-202ENST00000561643 EIF4A2Q14240 407 aaKnown RBP13.66□□□□□ -0.22
NEIL1-202ENST00000561643 SIRT2Q8IXJ6 389 aa13.66□□□□□ -0.22
NEIL1-202ENST00000561643 MON2Q7Z3U7 1717 aa13.66□□□□□ -0.22
NEIL1-202ENST00000561643 PDIA4P13667 645 aaKnown RBP13.66□□□□□ -0.22
NEIL1-202ENST00000561643 RBM25P49756 843 aaKnown RBP13.66□□□□□ -0.22
NEIL1-202ENST00000561643 ROBO2Q9HCK4 1378 aa13.66□□□□□ -0.22
NEIL1-202ENST00000561643 TTC21BQ7Z4L5 1316 aa13.66□□□□□ -0.22
NEIL1-202ENST00000561643 TMEM2Q9UHN6 1383 aa13.65□□□□□ -0.22
NEIL1-202ENST00000561643 GOLGA6L3A6NEY3 463 aa13.65□□□□□ -0.22
NEIL1-202ENST00000561643 SOX12O15370 315 aa13.65□□□□□ -0.22
NEIL1-202ENST00000561643 MCM4P33991 863 aa13.65□□□□□ -0.22
NEIL1-202ENST00000561643 ACEP12821 1306 aa13.65□□□□□ -0.22
NEIL1-202ENST00000561643 KNDC1Q76NI1 1749 aa13.64□□□□□ -0.23
NEIL1-202ENST00000561643 DLG5Q8TDM6 1919 aa13.64□□□□□ -0.23
NEIL1-202ENST00000561643 ITSN1Q15811 1721 aa13.64□□□□□ -0.23
NEIL1-202ENST00000561643 C3P01024 1663 aa13.64□□□□□ -0.23
NEIL1-202ENST00000561643 HAP1P54257 671 aaPredicted RBP13.63□□□□□ -0.23
NEIL1-202ENST00000561643 KRT24Q2M2I5 525 aa13.63□□□□□ -0.23
NEIL1-202ENST00000561643 MCM10Q7L590 875 aa13.63□□□□□ -0.23
NEIL1-202ENST00000561643 TBC1D9Q6ZT07 1266 aa13.63□□□□□ -0.23
NEIL1-202ENST00000561643 HSP90AB1P08238 724 aaKnown RBP13.63□□□□□ -0.23
NEIL1-202ENST00000561643 AKAP12Q02952 1782 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms