RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 CAPN5O15484 640 aaPredicted RBP7.27□□□□□ -1.25
HERC1-215ENST00000561436 ZIC2O95409 532 aaPredicted RBP7.27□□□□□ -1.25
HERC1-215ENST00000561436 DZIP3Q86Y13 1208 aaKnown RBP7.27□□□□□ -1.25
HERC1-215ENST00000561436 PNMA1Q8ND90 353 aa7.27□□□□□ -1.25
HERC1-215ENST00000561436 KCTD15Q96SI1 283 aaPredicted RBP7.27□□□□□ -1.25
HERC1-215ENST00000561436 VAC14Q08AM6 782 aa7.26□□□□□ -1.25
HERC1-215ENST00000561436 FLIIQ13045 1269 aa7.26□□□□□ -1.25
HERC1-215ENST00000561436 INTS6LQ5JSJ4 861 aaKnown RBP7.26□□□□□ -1.25
HERC1-215ENST00000561436 TRIM46Q7Z4K8 759 aa7.26□□□□□ -1.25
HERC1-215ENST00000561436 KLF16Q9BXK1 252 aaPredicted RBP7.26□□□□□ -1.25
HERC1-215ENST00000561436 TMPRSS4Q9NRS4 437 aa7.26□□□□□ -1.25
HERC1-215ENST00000561436 CBLBQ13191 982 aa7.25□□□□□ -1.25
HERC1-215ENST00000561436 ZNF787Q6DD87 383 aa7.25□□□□□ -1.25
HERC1-215ENST00000561436 CRIPAKQ8N1N5 446 aa7.25□□□□□ -1.25
HERC1-215ENST00000561436 MPNDQ8N594 471 aa7.25□□□□□ -1.25
HERC1-215ENST00000561436 ATP13A2Q9NQ11 1180 aa7.25□□□□□ -1.25
HERC1-215ENST00000561436 COG6Q9Y2V7 657 aa7.25□□□□□ -1.25
HERC1-215ENST00000561436 GPSM3Q9Y4H4 160 aa7.25□□□□□ -1.25
HERC1-215ENST00000561436 MAP4K5Q9Y4K4 846 aa7.25□□□□□ -1.25
HERC1-215ENST00000561436 GIGYF1O75420 1035 aaPredicted RBP7.24□□□□□ -1.25
HERC1-215ENST00000561436 SMCPP49901 116 aaPredicted RBP7.24□□□□□ -1.25
HERC1-215ENST00000561436 NR1H3Q13133 447 aa7.24□□□□□ -1.25
HERC1-215ENST00000561436 NR5A1Q13285 461 aa7.24□□□□□ -1.25
HERC1-215ENST00000561436 CTC1Q2NKJ3 1217 aa7.24□□□□□ -1.25
HERC1-215ENST00000561436 PPP1R26Q5T8A7 1209 aaPredicted RBP7.24□□□□□ -1.25
HERC1-215ENST00000561436 CCDC116Q8IYX3 515 aa7.24□□□□□ -1.25
HERC1-215ENST00000561436 SNRPBP14678 240 aaKnown RBP7.23□□□□□ -1.25
HERC1-215ENST00000561436 C6orf118Q5T5N4 469 aa7.22□□□□□ -1.25
HERC1-215ENST00000561436 CLUAP1Q96AJ1 413 aa7.22□□□□□ -1.25
HERC1-215ENST00000561436 SOBPA7XYQ1 873 aa7.21□□□□□ -1.26
HERC1-215ENST00000561436 ERVH48-1M5A8F1 160 aa7.21□□□□□ -1.26
HERC1-215ENST00000561436 SOCS7O14512 581 aa7.21□□□□□ -1.26
HERC1-215ENST00000561436 AGBL1Q96MI9 1066 aa7.21□□□□□ -1.26
HERC1-215ENST00000561436 PURBQ96QR8 312 aaKnown RBP7.21□□□□□ -1.26
HERC1-215ENST00000561436 C11orf95C9JLR9 678 aaPredicted RBP7.2□□□□□ -1.26
HERC1-215ENST00000561436 APBB1O00213 710 aa7.2□□□□□ -1.26
HERC1-215ENST00000561436 UBTFP17480 764 aaKnown RBP7.2□□□□□ -1.26
HERC1-215ENST00000561436 ZNF784Q8NCA9 323 aaPredicted RBP7.2□□□□□ -1.26
HERC1-215ENST00000561436 CYLDQ9NQC7 956 aa7.2□□□□□ -1.26
HERC1-215ENST00000561436 POM121CA8CG34 1229 aa7.19□□□□□ -1.26
HERC1-215ENST00000561436 NBPF20Q3BBV1 942 aa7.19□□□□□ -1.26
HERC1-215ENST00000561436 TSGA10IPQ3SY00 556 aa7.19□□□□□ -1.26
HERC1-215ENST00000561436 MRPL14Q6P1L8 145 aaKnown RBP7.19□□□□□ -1.26
HERC1-215ENST00000561436 ZFP42Q96MM3 310 aa7.19□□□□□ -1.26
HERC1-215ENST00000561436 ESPNB1AK53 854 aa7.18□□□□□ -1.26
HERC1-215ENST00000561436 ZMYND15Q9H091 742 aa7.18□□□□□ -1.26
HERC1-215ENST00000561436 EMILIN1Q9Y6C2 1016 aa7.18□□□□□ -1.26
HERC1-215ENST00000561436 ADD1P35611 737 aaKnown RBP7.17□□□□□ -1.26
HERC1-215ENST00000561436 SCTRP47872 440 aa7.17□□□□□ -1.26
HERC1-215ENST00000561436 RELBQ01201 579 aa7.17□□□□□ -1.26
HERC1-215ENST00000561436 MEIOBQ8N635 442 aa7.17□□□□□ -1.26
HERC1-215ENST00000561436 CDV3Q9UKY7 258 aaKnown RBP7.17□□□□□ -1.26
HERC1-215ENST00000561436 LILRA1O75019 489 aa7.16□□□□□ -1.26
HERC1-215ENST00000561436 BMP2P12643 396 aa7.16□□□□□ -1.26
HERC1-215ENST00000561436 CCDC85AQ96PX6 553 aaPredicted RBP7.16□□□□□ -1.26
HERC1-215ENST00000561436 CDCA7Q9BWT1 371 aaPredicted RBP7.16□□□□□ -1.26
HERC1-215ENST00000561436 ZNF395Q9H8N7 513 aaPredicted RBP7.16□□□□□ -1.26
HERC1-215ENST00000561436 PRM3Q9NNZ6 103 aa7.16□□□□□ -1.26
HERC1-215ENST00000561436 PGPEP1Q9NXJ5 209 aa7.16□□□□□ -1.26
HERC1-215ENST00000561436 PIK3CDO00329 1044 aa7.15□□□□□ -1.26
HERC1-215ENST00000561436 LINC00528Q8N1L1 170 aa7.15□□□□□ -1.26
HERC1-215ENST00000561436 TRIM47Q96LD4 638 aa7.15□□□□□ -1.26
HERC1-215ENST00000561436 CEP126Q9P2H0 1117 aa7.15□□□□□ -1.26
HERC1-215ENST00000561436 PCDHB11Q9Y5F2 797 aa7.15□□□□□ -1.26
HERC1-215ENST00000561436 ZNF775Q96BV0 537 aaPredicted RBP7.14□□□□□ -1.27
HERC1-215ENST00000561436 RAD21O60216 631 aa7.13□□□□□ -1.27
HERC1-215ENST00000561436 STAU1O95793 577 aaKnown RBP7.13□□□□□ -1.27
HERC1-215ENST00000561436 VEGFBP49765 207 aa7.13□□□□□ -1.27
HERC1-215ENST00000561436 DHX9Q08211 1270 aaKnown RBP7.13□□□□□ -1.27
HERC1-215ENST00000561436 SCARF1Q14162 830 aa7.13□□□□□ -1.27
HERC1-215ENST00000561436 KDF1Q8NAX2 398 aaPredicted RBP7.13□□□□□ -1.27
HERC1-215ENST00000561436 ADAMTS19Q8TE59 1207 aa7.13□□□□□ -1.27
HERC1-215ENST00000561436 ZNF330Q9Y3S2 320 aaPredicted RBP7.13□□□□□ -1.27
HERC1-215ENST00000561436 FIGNL2A6NMB9 653 aa7.12□□□□□ -1.27
HERC1-215ENST00000561436 EIF4G2P78344 907 aaKnown RBP eCLIP7.12□□□□□ -1.27
HERC1-215ENST00000561436 Q6ZVU0 165 aa7.12□□□□□ -1.27
HERC1-215ENST00000561436 INSM2Q96T92 566 aaPredicted RBP7.12□□□□□ -1.27
HERC1-215ENST00000561436 SUPT5HO00267 1087 aaKnown RBP7.11□□□□□ -1.27
HERC1-215ENST00000561436 CTSOP43234 321 aaPredicted RBP7.11□□□□□ -1.27
HERC1-215ENST00000561436 SENP2Q9HC62 589 aa7.11□□□□□ -1.27
HERC1-215ENST00000561436 UPP2O95045 317 aa7.1□□□□□ -1.27
HERC1-215ENST00000561436 ADH1AP07327 375 aa7.1□□□□□ -1.27
HERC1-215ENST00000561436 SEMA3FQ13275 785 aa7.1□□□□□ -1.27
HERC1-215ENST00000561436 WASHC4Q2M389 1173 aa7.1□□□□□ -1.27
HERC1-215ENST00000561436 OXLD1Q5BKU9 147 aa7.1□□□□□ -1.27
HERC1-215ENST00000561436 RNF135Q8IUD6 432 aa7.1□□□□□ -1.27
HERC1-215ENST00000561436 SEPT12Q8IYM1 358 aa7.1□□□□□ -1.27
HERC1-215ENST00000561436 PHTF2Q8N3S3 785 aa7.1□□□□□ -1.27
HERC1-215ENST00000561436 RAB6BQ9NRW1 208 aa7.1□□□□□ -1.27
HERC1-215ENST00000561436 DNMT3LQ9UJW3 386 aa7.1□□□□□ -1.27
HERC1-215ENST00000561436 SLFNL1Q499Z3 407 aa7.09□□□□□ -1.27
HERC1-215ENST00000561436 PROSER2Q86WR7 435 aaPredicted RBP7.09□□□□□ -1.27
HERC1-215ENST00000561436 TSEN34Q9BSV6 310 aaKnown RBP7.09□□□□□ -1.27
HERC1-215ENST00000561436 MAN1A2O60476 641 aa7.08□□□□□ -1.28
HERC1-215ENST00000561436 ERVK-9P63128 1117 aa7.08□□□□□ -1.28
HERC1-215ENST00000561436 CC2D2BQ6DHV5 1058 aa7.08□□□□□ -1.28
HERC1-215ENST00000561436 WWC1Q8IX03 1113 aa7.08□□□□□ -1.28
HERC1-215ENST00000561436 DEPDC4Q8N2C3 294 aa7.08□□□□□ -1.28
HERC1-215ENST00000561436 KIFC2Q96AC6 838 aa7.08□□□□□ -1.28
HERC1-215ENST00000561436 OSBPL3Q9H4L5 887 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms