RNA–Protein interactions for RNA: ENST00000561356.1

TM2D3-214, Transcript of TM2 domain containing 3, humanhuman

TSL 4

Gene TM2D3, Length 565 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3-214ENST00000561356 MAPK8IP2Q13387 824 aaPredicted RBP12.04□□□□□ -0.48
TM2D3-214ENST00000561356 ABHD8Q96I13 439 aa12.04□□□□□ -0.48
TM2D3-214ENST00000561356 AKAP12Q02952 1782 aa12.04□□□□□ -0.48
TM2D3-214ENST00000561356 BCL9O00512 1426 aa12.03□□□□□ -0.48
TM2D3-214ENST00000561356 KNDC1Q76NI1 1749 aa12.03□□□□□ -0.48
TM2D3-214ENST00000561356 RGS19P49795 217 aa12.03□□□□□ -0.48
TM2D3-214ENST00000561356 PNPLA7Q6ZV29 1317 aa12.03□□□□□ -0.48
TM2D3-214ENST00000561356 C11orf95C9JLR9 678 aaPredicted RBP12.02□□□□□ -0.49
TM2D3-214ENST00000561356 MARCH10Q8NA82 808 aaPredicted RBP12.02□□□□□ -0.49
TM2D3-214ENST00000561356 PMFBP1Q8TBY8 1022 aa12.02□□□□□ -0.49
TM2D3-214ENST00000561356 FOXN1O15353 648 aa12.01□□□□□ -0.49
TM2D3-214ENST00000561356 NHSQ6T4R5 1651 aa12□□□□□ -0.49
TM2D3-214ENST00000561356 FSTL1Q12841 308 aa12□□□□□ -0.49
TM2D3-214ENST00000561356 LRRC4BQ9NT99 713 aa12□□□□□ -0.49
TM2D3-214ENST00000561356 ZC3H6P61129 1189 aaKnown RBP11.99□□□□□ -0.49
TM2D3-214ENST00000561356 SLC16A10Q8TF71 515 aa11.99□□□□□ -0.49
TM2D3-214ENST00000561356 AKT1S1Q96B36 256 aa11.99□□□□□ -0.49
TM2D3-214ENST00000561356 COL5A2P05997 1499 aaPredicted RBP11.98□□□□□ -0.49
TM2D3-214ENST00000561356 KANK4Q5T7N3 995 aaPredicted RBP11.98□□□□□ -0.49
TM2D3-214ENST00000561356 PRDM10Q9NQV6 1147 aa11.98□□□□□ -0.49
TM2D3-214ENST00000561356 THRAP3Q9Y2W1 955 aaKnown RBP11.98□□□□□ -0.49
TM2D3-214ENST00000561356 STK26Q9P289 416 aa11.97□□□□□ -0.49
TM2D3-214ENST00000561356 PPLO60437 1756 aa11.97□□□□□ -0.49
TM2D3-214ENST00000561356 BTAF1O14981 1849 aa11.96□□□□□ -0.49
TM2D3-214ENST00000561356 EVA1CP58658 441 aa11.96□□□□□ -0.49
TM2D3-214ENST00000561356 ACIN1Q9UKV3 1341 aaKnown RBP11.95□□□□□ -0.5
TM2D3-214ENST00000561356 DDB1Q16531 1140 aa11.95□□□□□ -0.5
TM2D3-214ENST00000561356 KIF1BO60333 1816 aa11.95□□□□□ -0.5
TM2D3-214ENST00000561356 CRB1P82279 1406 aa11.93□□□□□ -0.5
TM2D3-214ENST00000561356 ABCC11Q96J66 1382 aa11.92□□□□□ -0.5
TM2D3-214ENST00000561356 IGSF1Q8N6C5 1336 aa11.92□□□□□ -0.5
TM2D3-214ENST00000561356 KCPQ6ZWJ8 1503 aa11.92□□□□□ -0.5
TM2D3-214ENST00000561356 QRICH2Q9H0J4 1663 aa11.92□□□□□ -0.5
TM2D3-214ENST00000561356 C10orf71Q711Q0 1435 aa11.92□□□□□ -0.5
TM2D3-214ENST00000561356 CCDC85CA6NKD9 419 aa11.91□□□□□ -0.5
TM2D3-214ENST00000561356 MSL1Q68DK7 614 aa11.91□□□□□ -0.5
TM2D3-214ENST00000561356 CD2APQ9Y5K6 639 aa11.91□□□□□ -0.5
TM2D3-214ENST00000561356 ANKARQ7Z5J8 1434 aa11.91□□□□□ -0.5
TM2D3-214ENST00000561356 PXDNLA1KZ92 1463 aa11.9□□□□□ -0.5
TM2D3-214ENST00000561356 VGFO15240 615 aaPredicted RBP11.9□□□□□ -0.5
TM2D3-214ENST00000561356 PKD1L3Q7Z443 1732 aa11.9□□□□□ -0.5
TM2D3-214ENST00000561356 GPRASP1Q5JY77 1395 aa11.9□□□□□ -0.5
TM2D3-214ENST00000561356 PRR36Q9H6K5 1346 aa11.89□□□□□ -0.51
TM2D3-214ENST00000561356 VPS8Q8N3P4 1428 aa11.89□□□□□ -0.51
TM2D3-214ENST00000561356 NUTM2GQ5VZR2 741 aa11.89□□□□□ -0.51
TM2D3-214ENST00000561356 C16orf71Q8IYS4 520 aaPredicted RBP11.89□□□□□ -0.51
TM2D3-214ENST00000561356 TRPM1Q7Z4N2 1603 aa11.89□□□□□ -0.51
TM2D3-214ENST00000561356 TNRC6CQ9HCJ0 1690 aaKnown RBP11.88□□□□□ -0.51
TM2D3-214ENST00000561356 TMEM132EQ6IEE7 984 aa11.88□□□□□ -0.51
TM2D3-214ENST00000561356 CPDO75976 1380 aa11.88□□□□□ -0.51
TM2D3-214ENST00000561356 KIAA1551Q9HCM1 1747 aa11.88□□□□□ -0.51
TM2D3-214ENST00000561356 PAK3O75914 559 aaPredicted RBP11.87□□□□□ -0.51
TM2D3-214ENST00000561356 LBX1P52954 281 aa11.87□□□□□ -0.51
TM2D3-214ENST00000561356 KCNQ4P56696 695 aa11.87□□□□□ -0.51
TM2D3-214ENST00000561356 ACSBG1Q96GR2 724 aa11.87□□□□□ -0.51
TM2D3-214ENST00000561356 BRD4O60885 1362 aaPredicted RBP11.87□□□□□ -0.51
TM2D3-214ENST00000561356 NUP155O75694 1391 aa11.87□□□□□ -0.51
TM2D3-214ENST00000561356 PIK3C2AO00443 1686 aa11.87□□□□□ -0.51
TM2D3-214ENST00000561356 YTHDC2Q9H6S0 1430 aaKnown RBP11.86□□□□□ -0.51
TM2D3-214ENST00000561356 CTCFP49711 727 aaPredicted RBP11.86□□□□□ -0.51
TM2D3-214ENST00000561356 SMC1BQ8NDV3 1235 aa11.86□□□□□ -0.51
TM2D3-214ENST00000561356 TFCP2L1Q9NZI6 479 aa11.85□□□□□ -0.51
TM2D3-214ENST00000561356 MKRN1Q9UHC7 482 aaKnown RBP11.85□□□□□ -0.51
TM2D3-214ENST00000561356 ADGRF5Q8IZF2 1346 aa11.85□□□□□ -0.51
TM2D3-214ENST00000561356 COL23A1Q86Y22 540 aaPredicted RBP11.84□□□□□ -0.51
TM2D3-214ENST00000561356 USP6P35125 1406 aa11.84□□□□□ -0.51
TM2D3-214ENST00000561356 RRAGCQ9HB90 399 aa11.83□□□□□ -0.52
TM2D3-214ENST00000561356 A0A0C4DFX4 3053 aa11.83□□□□□ -0.52
TM2D3-214ENST00000561356 HSPA8P11142 646 aaKnown RBP11.82□□□□□ -0.52
TM2D3-214ENST00000561356 SAFB2Q14151 953 aaKnown RBP eCLIP11.82□□□□□ -0.52
TM2D3-214ENST00000561356 HIRIP3Q9BW71 556 aaPredicted RBP11.82□□□□□ -0.52
TM2D3-214ENST00000561356 RNF216Q9NWF9 866 aaPredicted RBP11.82□□□□□ -0.52
TM2D3-214ENST00000561356 COL18A1P39060 1754 aa11.82□□□□□ -0.52
TM2D3-214ENST00000561356 VIRMAQ69YN4 1812 aaKnown RBP11.81□□□□□ -0.52
TM2D3-214ENST00000561356 SZT2Q5T011 3432 aa11.81□□□□□ -0.52
TM2D3-214ENST00000561356 ANKRD30BQ9BXX2 1392 aa11.8□□□□□ -0.52
TM2D3-214ENST00000561356 USP54Q70EL1 1684 aa11.8□□□□□ -0.52
TM2D3-214ENST00000561356 ABCC6O95255 1503 aa11.8□□□□□ -0.52
TM2D3-214ENST00000561356 LY75O60449 1722 aa11.8□□□□□ -0.52
TM2D3-214ENST00000561356 N4BP2Q86UW6 1770 aaPredicted RBP11.79□□□□□ -0.52
TM2D3-214ENST00000561356 PLEKHG2Q9H7P9 1386 aa11.79□□□□□ -0.52
TM2D3-214ENST00000561356 PRPF38BQ5VTL8 546 aaKnown RBP11.78□□□□□ -0.52
TM2D3-214ENST00000561356 C9orf131Q5VYM1 1079 aa11.78□□□□□ -0.52
TM2D3-214ENST00000561356 RPGRIP1LQ68CZ1 1315 aa11.78□□□□□ -0.52
TM2D3-214ENST00000561356 CNTNAP1P78357 1384 aa11.78□□□□□ -0.52
TM2D3-214ENST00000561356 TOM1L2Q6ZVM7 507 aa11.77□□□□□ -0.53
TM2D3-214ENST00000561356 WBP1LQ9NX94 342 aa11.77□□□□□ -0.53
TM2D3-214ENST00000561356 SLC27A3Q5K4L6 730 aa11.76□□□□□ -0.53
TM2D3-214ENST00000561356 NGDNQ8NEJ9 315 aaKnown RBP11.76□□□□□ -0.53
TM2D3-214ENST00000561356 SIRT1Q96EB6 747 aa11.76□□□□□ -0.53
TM2D3-214ENST00000561356 PRAM1Q96QH2 718 aa11.76□□□□□ -0.53
TM2D3-214ENST00000561356 TOGARAM1Q9Y4F4 1720 aa11.76□□□□□ -0.53
TM2D3-214ENST00000561356 BRCA1P38398 1863 aaKnown RBP11.76□□□□□ -0.53
TM2D3-214ENST00000561356 PIK3C2GO75747 1445 aa11.76□□□□□ -0.53
TM2D3-214ENST00000561356 AIDAQ96BJ3 306 aa11.75□□□□□ -0.53
TM2D3-214ENST00000561356 CFAP44Q96MT7 982 aa11.75□□□□□ -0.53
TM2D3-214ENST00000561356 RGPD5Q99666 1765 aa11.74□□□□□ -0.53
TM2D3-214ENST00000561356 KIF13BQ9NQT8 1826 aa11.74□□□□□ -0.53
TM2D3-214ENST00000561356 SMIM5Q71RC9 77 aa11.74□□□□□ -0.53
TM2D3-214ENST00000561356 WDR17Q8IZU2 1322 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms