RNA–Protein interactions for RNA: ENST00000561305.1

CASC4-211, Transcript of cancer susceptibility 4, humanhuman

TSL 5

Gene CASC4, Length 353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-211ENST00000561305 SCARF1Q14162 830 aa8.89□□□□□ -0.99
CASC4-211ENST00000561305 ZBTB33Q86T24 672 aa8.89□□□□□ -0.99
CASC4-211ENST00000561305 PNMA1Q8ND90 353 aa8.89□□□□□ -0.99
CASC4-211ENST00000561305 TRIM34Q9BYJ4 488 aa8.89□□□□□ -0.99
CASC4-211ENST00000561305 CCDC116Q8IYX3 515 aa8.88□□□□□ -0.99
CASC4-211ENST00000561305 EMILIN1Q9Y6C2 1016 aa8.88□□□□□ -0.99
CASC4-211ENST00000561305 MEIOBQ8N635 442 aa8.87□□□□□ -0.99
CASC4-211ENST00000561305 ADAM32Q8TC27 787 aa8.87□□□□□ -0.99
CASC4-211ENST00000561305 SLC10A4Q96EP9 437 aa8.87□□□□□ -0.99
CASC4-211ENST00000561305 PURBQ96QR8 312 aaKnown RBP8.87□□□□□ -0.99
CASC4-211ENST00000561305 KCTD15Q96SI1 283 aaPredicted RBP8.86□□□□□ -0.99
CASC4-211ENST00000561305 LCE2CQ5TA81 110 aa8.85□□□□□ -0.99
CASC4-211ENST00000561305 GJD4Q96KN9 370 aaPredicted RBP8.85□□□□□ -0.99
CASC4-211ENST00000561305 PPP1R26Q5T8A7 1209 aaPredicted RBP8.84□□□□□ -0.99
CASC4-211ENST00000561305 NXF1Q9UBU9 619 aaKnown RBP8.84□□□□□ -0.99
CASC4-211ENST00000561305 INTS6LQ5JSJ4 861 aaKnown RBP8.83□□□□□ -1
CASC4-211ENST00000561305 NPAS3Q8IXF0 933 aa8.83□□□□□ -1
CASC4-211ENST00000561305 LINC00528Q8N1L1 170 aa8.83□□□□□ -1
CASC4-211ENST00000561305 BANK1Q8NDB2 785 aa8.83□□□□□ -1
CASC4-211ENST00000561305 PGPEP1Q9NXJ5 209 aa8.83□□□□□ -1
CASC4-211ENST00000561305 WIPF1O43516 503 aa8.82□□□□□ -1
CASC4-211ENST00000561305 DHX9Q08211 1270 aaKnown RBP8.82□□□□□ -1
CASC4-211ENST00000561305 Q6ZVU0 165 aa8.82□□□□□ -1
CASC4-211ENST00000561305 SOCS7O14512 581 aa8.81□□□□□ -1
CASC4-211ENST00000561305 UPP2O95045 317 aa8.81□□□□□ -1
CASC4-211ENST00000561305 C6orf118Q5T5N4 469 aa8.81□□□□□ -1
CASC4-211ENST00000561305 TSEN34Q9BSV6 310 aaKnown RBP8.81□□□□□ -1
CASC4-211ENST00000561305 BMP2P12643 396 aa8.8□□□□□ -1
CASC4-211ENST00000561305 NBPF20Q3BBV1 942 aa8.8□□□□□ -1
CASC4-211ENST00000561305 SLC16A10Q8TF71 515 aa8.8□□□□□ -1
CASC4-211ENST00000561305 SOS2Q07890 1332 aaPredicted RBP8.8□□□□□ -1
CASC4-211ENST00000561305 SOBPA7XYQ1 873 aa8.79□□□□□ -1
CASC4-211ENST00000561305 ESPNB1AK53 854 aa8.79□□□□□ -1
CASC4-211ENST00000561305 CBLBQ13191 982 aa8.79□□□□□ -1
CASC4-211ENST00000561305 DZIP3Q86Y13 1208 aaKnown RBP8.79□□□□□ -1
CASC4-211ENST00000561305 ZBBXA8MT70 800 aa8.78□□□□□ -1
CASC4-211ENST00000561305 H3BM21 787 aa8.77□□□□□ -1.01
CASC4-211ENST00000561305 MAN1A2O60476 641 aa8.76□□□□□ -1.01
CASC4-211ENST00000561305 GPR37L1O60883 481 aa8.76□□□□□ -1.01
CASC4-211ENST00000561305 FBXO45P0C2W1 286 aa8.76□□□□□ -1.01
CASC4-211ENST00000561305 MTMR14Q8NCE2 650 aa8.76□□□□□ -1.01
CASC4-211ENST00000561305 SPINT1O43278 529 aa8.75□□□□□ -1.01
CASC4-211ENST00000561305 SEPT12Q8IYM1 358 aa8.75□□□□□ -1.01
CASC4-211ENST00000561305 SNRKQ9NRH2 765 aa8.75□□□□□ -1.01
CASC4-211ENST00000561305 TMPRSS4Q9NRS4 437 aa8.75□□□□□ -1.01
CASC4-211ENST00000561305 DNMT3LQ9UJW3 386 aa8.75□□□□□ -1.01
CASC4-211ENST00000561305 ERVH48-1M5A8F1 160 aa8.74□□□□□ -1.01
CASC4-211ENST00000561305 VEGFBP49765 207 aa8.74□□□□□ -1.01
CASC4-211ENST00000561305 IRF7Q92985 503 aa8.74□□□□□ -1.01
CASC4-211ENST00000561305 LILRA1O75019 489 aa8.73□□□□□ -1.01
CASC4-211ENST00000561305 NR1H3Q13133 447 aa8.73□□□□□ -1.01
CASC4-211ENST00000561305 ZNF784Q8NCA9 323 aaPredicted RBP8.73□□□□□ -1.01
CASC4-211ENST00000561305 TTLL8A6PVC2 850 aa8.72□□□□□ -1.01
CASC4-211ENST00000561305 RAB15P59190 212 aa8.72□□□□□ -1.01
CASC4-211ENST00000561305 INSM1Q01101 510 aaPredicted RBP8.72□□□□□ -1.01
CASC4-211ENST00000561305 AGBL1Q96MI9 1066 aa8.72□□□□□ -1.01
CASC4-211ENST00000561305 PCDHB9Q9Y5E1 797 aa8.72□□□□□ -1.01
CASC4-211ENST00000561305 NDUFB9Q9Y6M9 179 aa8.72□□□□□ -1.01
CASC4-211ENST00000561305 ERBB4Q15303 1308 aa8.72□□□□□ -1.01
CASC4-211ENST00000561305 APBB1O00213 710 aa8.71□□□□□ -1.02
CASC4-211ENST00000561305 VSIG8P0DPA2 414 aa8.71□□□□□ -1.02
CASC4-211ENST00000561305 PRKCSHP14314 528 aaPredicted RBP8.71□□□□□ -1.02
CASC4-211ENST00000561305 ADD1P35611 737 aaKnown RBP8.71□□□□□ -1.02
CASC4-211ENST00000561305 GMPRP36959 345 aa8.71□□□□□ -1.02
CASC4-211ENST00000561305 MCCD1P59942 119 aaPredicted RBP8.71□□□□□ -1.02
CASC4-211ENST00000561305 GIGYF1O75420 1035 aaPredicted RBP8.7□□□□□ -1.02
CASC4-211ENST00000561305 ADH1AP07327 375 aa8.7□□□□□ -1.02
CASC4-211ENST00000561305 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.7□□□□□ -1.02
CASC4-211ENST00000561305 CCDC125Q86Z20 511 aa8.7□□□□□ -1.02
CASC4-211ENST00000561305 KDF1Q8NAX2 398 aaPredicted RBP8.7□□□□□ -1.02
CASC4-211ENST00000561305 PPFIA3O75145 1194 aa8.69□□□□□ -1.02
CASC4-211ENST00000561305 RELBQ01201 579 aa8.69□□□□□ -1.02
CASC4-211ENST00000561305 FIGNL2A6NMB9 653 aa8.68□□□□□ -1.02
CASC4-211ENST00000561305 PTGIRP43119 386 aa8.68□□□□□ -1.02
CASC4-211ENST00000561305 ZNF592Q92610 1267 aa8.68□□□□□ -1.02
CASC4-211ENST00000561305 TRIM52Q96A61 297 aa8.68□□□□□ -1.02
CASC4-211ENST00000561305 ZNF330Q9Y3S2 320 aaPredicted RBP8.68□□□□□ -1.02
CASC4-211ENST00000561305 CTSOP43234 321 aaPredicted RBP8.67□□□□□ -1.02
CASC4-211ENST00000561305 INSM2Q96T92 566 aaPredicted RBP8.67□□□□□ -1.02
CASC4-211ENST00000561305 STK17AQ9UEE5 414 aa8.67□□□□□ -1.02
CASC4-211ENST00000561305 PTSQ03393 145 aa8.66□□□□□ -1.02
CASC4-211ENST00000561305 RNF20Q5VTR2 975 aa8.66□□□□□ -1.02
CASC4-211ENST00000561305 ZNF395Q9H8N7 513 aaPredicted RBP8.66□□□□□ -1.02
CASC4-211ENST00000561305 CYLDQ9NQC7 956 aa8.66□□□□□ -1.02
CASC4-211ENST00000561305 LORP23490 312 aaPredicted RBP8.65□□□□□ -1.02
CASC4-211ENST00000561305 RNF217Q8TC41 542 aa8.64□□□□□ -1.03
CASC4-211ENST00000561305 SLC35F4A4IF30 521 aa8.63□□□□□ -1.03
CASC4-211ENST00000561305 ERVK-9P63128 1117 aa8.63□□□□□ -1.03
CASC4-211ENST00000561305 FOXD4L5Q5VV16 416 aaPredicted RBP8.63□□□□□ -1.03
CASC4-211ENST00000561305 POLMQ9NP87 494 aaPredicted RBP8.63□□□□□ -1.03
CASC4-211ENST00000561305 TBC1D2BQ9UPU7 963 aa8.63□□□□□ -1.03
CASC4-211ENST00000561305 CC2D2BQ6DHV5 1058 aa8.62□□□□□ -1.03
CASC4-211ENST00000561305 IRF5Q13568 498 aa8.61□□□□□ -1.03
CASC4-211ENST00000561305 CCDC155Q8N6L0 562 aa8.61□□□□□ -1.03
CASC4-211ENST00000561305 NANOS1Q8WY41 292 aaKnown RBP8.61□□□□□ -1.03
CASC4-211ENST00000561305 PRM3Q9NNZ6 103 aa8.61□□□□□ -1.03
CASC4-211ENST00000561305 CEP126Q9P2H0 1117 aa8.61□□□□□ -1.03
CASC4-211ENST00000561305 ATP5J2-PTCD1G3V325 749 aa8.6□□□□□ -1.03
CASC4-211ENST00000561305 RNF144AP50876 292 aaPredicted RBP8.6□□□□□ -1.03
CASC4-211ENST00000561305 ZSCAN1Q8NBB4 408 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms