RNA–Protein interactions for RNA: ENST00000561276.5

LRRC28-221, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-221ENST00000561276 CPDO75976 1380 aa13.97□□□□□ -0.17
LRRC28-221ENST00000561276 COL18A1P39060 1754 aa13.97□□□□□ -0.17
LRRC28-221ENST00000561276 PLCH1Q4KWH8 1693 aa13.97□□□□□ -0.17
LRRC28-221ENST00000561276 AXIN2Q9Y2T1 843 aa13.96□□□□□ -0.17
LRRC28-221ENST00000561276 AATKQ6ZMQ8 1374 aa13.96□□□□□ -0.18
LRRC28-221ENST00000561276 MAP3K19Q56UN5 1328 aa13.95□□□□□ -0.18
LRRC28-221ENST00000561276 PPM1GO15355 546 aaPredicted RBP13.95□□□□□ -0.18
LRRC28-221ENST00000561276 AMPHP49418 695 aa13.95□□□□□ -0.18
LRRC28-221ENST00000561276 FNBP4Q8N3X1 1017 aaPredicted RBP13.95□□□□□ -0.18
LRRC28-221ENST00000561276 BTG4Q9NY30 223 aa13.95□□□□□ -0.18
LRRC28-221ENST00000561276 POLKQ9UBT6 870 aa13.95□□□□□ -0.18
LRRC28-221ENST00000561276 NWD2Q9ULI1 1742 aa13.95□□□□□ -0.18
LRRC28-221ENST00000561276 AFF2P51816 1311 aa13.94□□□□□ -0.18
LRRC28-221ENST00000561276 IP6K1Q92551 441 aa13.94□□□□□ -0.18
LRRC28-221ENST00000561276 EMILIN1Q9Y6C2 1016 aa13.94□□□□□ -0.18
LRRC28-221ENST00000561276 LMO7Q8WWI1 1683 aa13.94□□□□□ -0.18
LRRC28-221ENST00000561276 CAMTA1Q9Y6Y1 1673 aa13.94□□□□□ -0.18
LRRC28-221ENST00000561276 PEAK1Q9H792 1746 aa13.93□□□□□ -0.18
LRRC28-221ENST00000561276 EVA1CP58658 441 aa13.93□□□□□ -0.18
LRRC28-221ENST00000561276 USP21Q9UK80 565 aa13.93□□□□□ -0.18
LRRC28-221ENST00000561276 SLIT2O94813 1529 aa13.93□□□□□ -0.18
LRRC28-221ENST00000561276 HOXC9P31274 260 aa13.92□□□□□ -0.18
LRRC28-221ENST00000561276 MTHFSP49914 203 aa13.92□□□□□ -0.18
LRRC28-221ENST00000561276 RALBP1Q15311 655 aa13.92□□□□□ -0.18
LRRC28-221ENST00000561276 PARD3Q8TEW0 1356 aa13.92□□□□□ -0.18
LRRC28-221ENST00000561276 BCL9LQ86UU0 1499 aa13.92□□□□□ -0.18
LRRC28-221ENST00000561276 NRAPQ86VF7 1730 aa13.91□□□□□ -0.18
LRRC28-221ENST00000561276 PPP2R1AP30153 589 aa13.91□□□□□ -0.18
LRRC28-221ENST00000561276 HSP90AB2PQ58FF8 381 aa13.91□□□□□ -0.18
LRRC28-221ENST00000561276 UNC5CLQ8IV45 518 aa13.91□□□□□ -0.18
LRRC28-221ENST00000561276 PRKRIP1Q9H875 184 aaPredicted RBP13.91□□□□□ -0.18
LRRC28-221ENST00000561276 QTRT2Q9H974 415 aaKnown RBP13.9□□□□□ -0.18
LRRC28-221ENST00000561276 STRN4Q9NRL3 753 aa13.9□□□□□ -0.18
LRRC28-221ENST00000561276 RGS17Q9UGC6 210 aaPredicted RBP13.9□□□□□ -0.18
LRRC28-221ENST00000561276 FLT4P35916 1363 aa13.9□□□□□ -0.18
LRRC28-221ENST00000561276 KIF24Q5T7B8 1368 aa13.9□□□□□ -0.18
LRRC28-221ENST00000561276 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.9□□□□□ -0.18
LRRC28-221ENST00000561276 ABCC6O95255 1503 aa13.9□□□□□ -0.19
LRRC28-221ENST00000561276 RGPD2P0DJD1 1756 aa13.89□□□□□ -0.19
LRRC28-221ENST00000561276 ZNF772Q68DY9 489 aaPredicted RBP13.89□□□□□ -0.19
LRRC28-221ENST00000561276 LTV1Q96GA3 475 aaPredicted RBP13.89□□□□□ -0.19
LRRC28-221ENST00000561276 BLMP54132 1417 aaPredicted RBP13.89□□□□□ -0.19
LRRC28-221ENST00000561276 RTL1A6NKG5 1358 aa13.88□□□□□ -0.19
LRRC28-221ENST00000561276 ANP32CO43423 234 aa13.88□□□□□ -0.19
LRRC28-221ENST00000561276 LARP1Q6PKG0 1096 aaKnown RBP13.88□□□□□ -0.19
LRRC28-221ENST00000561276 ANKRD24Q8TF21 1146 aa13.88□□□□□ -0.19
LRRC28-221ENST00000561276 COL5A2P05997 1499 aaPredicted RBP13.87□□□□□ -0.19
LRRC28-221ENST00000561276 INSRP06213 1382 aa13.87□□□□□ -0.19
LRRC28-221ENST00000561276 CSB-PGBD3P0DP91 1061 aa13.87□□□□□ -0.19
LRRC28-221ENST00000561276 DIEXFQ68CQ4 756 aaKnown RBP13.87□□□□□ -0.19
LRRC28-221ENST00000561276 SMG6Q86US8 1419 aaKnown RBP13.87□□□□□ -0.19
LRRC28-221ENST00000561276 VPS72Q15906 364 aa13.86□□□□□ -0.19
LRRC28-221ENST00000561276 TOM1L2Q6ZVM7 507 aa13.86□□□□□ -0.19
LRRC28-221ENST00000561276 TRPC5Q9UL62 973 aaPredicted RBP13.86□□□□□ -0.19
LRRC28-221ENST00000561276 CCDC9Q9Y3X0 531 aaKnown RBP13.86□□□□□ -0.19
LRRC28-221ENST00000561276 ERBB3P21860 1342 aa13.86□□□□□ -0.19
LRRC28-221ENST00000561276 WDR17Q8IZU2 1322 aa13.86□□□□□ -0.19
LRRC28-221ENST00000561276 MYBBP1AQ9BQG0 1328 aaKnown RBP13.86□□□□□ -0.19
LRRC28-221ENST00000561276 USP35Q9P2H5 1018 aa13.85□□□□□ -0.19
LRRC28-221ENST00000561276 CDK12Q9NYV4 1490 aaPredicted RBP13.85□□□□□ -0.19
LRRC28-221ENST00000561276 FAM208AQ9UK61 1670 aaKnown RBP13.85□□□□□ -0.19
LRRC28-221ENST00000561276 EIF4A2Q14240 407 aaKnown RBP13.84□□□□□ -0.19
LRRC28-221ENST00000561276 POTEAQ6S8J7 498 aa13.84□□□□□ -0.19
LRRC28-221ENST00000561276 GJD4Q96KN9 370 aaPredicted RBP13.84□□□□□ -0.19
LRRC28-221ENST00000561276 CFAP53Q96M91 514 aa13.84□□□□□ -0.19
LRRC28-221ENST00000561276 NLRP2Q9NX02 1062 aa13.84□□□□□ -0.19
LRRC28-221ENST00000561276 ATRNO75882 1429 aa13.83□□□□□ -0.2
LRRC28-221ENST00000561276 CRB1P82279 1406 aa13.83□□□□□ -0.2
LRRC28-221ENST00000561276 DIAPH1O60610 1272 aaKnown RBP13.83□□□□□ -0.2
LRRC28-221ENST00000561276 NBPF6Q5VWK0 638 aa13.83□□□□□ -0.2
LRRC28-221ENST00000561276 NBPF4Q96M43 638 aa13.83□□□□□ -0.2
LRRC28-221ENST00000561276 SPATA31A1Q5TZJ5 1347 aa13.83□□□□□ -0.2
LRRC28-221ENST00000561276 SPATA31A5Q5VU36 1347 aa13.83□□□□□ -0.2
LRRC28-221ENST00000561276 SPATA31A7Q8IWB4 1347 aa13.83□□□□□ -0.2
LRRC28-221ENST00000561276 IL13P35225 146 aa13.82□□□□□ -0.2
LRRC28-221ENST00000561276 CARD10Q9BWT7 1032 aa13.82□□□□□ -0.2
LRRC28-221ENST00000561276 RBM6P78332 1123 aaKnown RBP13.81□□□□□ -0.2
LRRC28-221ENST00000561276 EYA1Q99502 592 aa13.81□□□□□ -0.2
LRRC28-221ENST00000561276 U3KPZ7 1027 aaPredicted RBP13.81□□□□□ -0.2
LRRC28-221ENST00000561276 GLI3P10071 1580 aa13.8□□□□□ -0.2
LRRC28-221ENST00000561276 RXRBP28702 533 aa13.8□□□□□ -0.2
LRRC28-221ENST00000561276 TCP11L2Q8N4U5 519 aa13.8□□□□□ -0.2
LRRC28-221ENST00000561276 USHBP1Q8N6Y0 703 aa13.79□□□□□ -0.2
LRRC28-221ENST00000561276 THRAP3Q9Y2W1 955 aaKnown RBP13.79□□□□□ -0.2
LRRC28-221ENST00000561276 COL3A1P02461 1466 aaPredicted RBP13.79□□□□□ -0.2
LRRC28-221ENST00000561276 RGPD1P0DJD0 1748 aa13.78□□□□□ -0.2
LRRC28-221ENST00000561276 ONECUT3O60422 494 aaPredicted RBP13.78□□□□□ -0.2
LRRC28-221ENST00000561276 FAM98CQ17RN3 349 aaKnown RBP13.78□□□□□ -0.2
LRRC28-221ENST00000561276 CCDC184Q52MB2 194 aa13.78□□□□□ -0.2
LRRC28-221ENST00000561276 NUDCQ9Y266 331 aa13.78□□□□□ -0.2
LRRC28-221ENST00000561276 U2SURPO15042 1029 aaKnown RBP13.77□□□□□ -0.21
LRRC28-221ENST00000561276 BARGINQ6ZT62 677 aa13.77□□□□□ -0.21
LRRC28-221ENST00000561276 WNK3Q9BYP7 1800 aa13.77□□□□□ -0.21
LRRC28-221ENST00000561276 IGSF1Q8N6C5 1336 aa13.76□□□□□ -0.21
LRRC28-221ENST00000561276 HMOX1P09601 288 aa13.75□□□□□ -0.21
LRRC28-221ENST00000561276 IL2RBP14784 551 aa13.75□□□□□ -0.21
LRRC28-221ENST00000561276 SULT6B1Q6IMI4 303 aa13.75□□□□□ -0.21
LRRC28-221ENST00000561276 MIER1Q8N108 512 aa13.75□□□□□ -0.21
LRRC28-221ENST00000561276 BRWD3Q6RI45 1802 aa13.75□□□□□ -0.21
LRRC28-221ENST00000561276 A0A0G2JS52 829 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms