RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 SF3B2Q13435 895 aaKnown RBP24.24■■□□□ 1.47
CDC42BPB-208ENST00000561271 HDGFL2Q7Z4V5 671 aaPredicted RBP24.24■■□□□ 1.47
CDC42BPB-208ENST00000561271 NME9Q86XW9 330 aa24.24■■□□□ 1.47
CDC42BPB-208ENST00000561271 CLSPNQ9HAW4 1339 aa24.24■■□□□ 1.47
CDC42BPB-208ENST00000561271 USP31Q70CQ4 1352 aa24.24■■□□□ 1.47
CDC42BPB-208ENST00000561271 BARGINQ6ZT62 677 aa24.23■■□□□ 1.47
CDC42BPB-208ENST00000561271 TCP11L2Q8N4U5 519 aa24.23■■□□□ 1.47
CDC42BPB-208ENST00000561271 KCNH5Q8NCM2 988 aa24.23■■□□□ 1.47
CDC42BPB-208ENST00000561271 NINLQ9Y2I6 1382 aa24.22■■□□□ 1.47
CDC42BPB-208ENST00000561271 OVOS2A0A0J9YW53 1432 aa24.21■■□□□ 1.47
CDC42BPB-208ENST00000561271 OVOS2Q6IE36 1432 aa24.21■■□□□ 1.47
CDC42BPB-208ENST00000561271 ARHGEF25Q86VW2 580 aa24.21■■□□□ 1.47
CDC42BPB-208ENST00000561271 PUS7Q96PZ0 661 aaKnown RBP24.21■■□□□ 1.47
CDC42BPB-208ENST00000561271 TERF2IPQ9NYB0 399 aa24.21■■□□□ 1.47
CDC42BPB-208ENST00000561271 RGPD2P0DJD1 1756 aa24.21■■□□□ 1.47
CDC42BPB-208ENST00000561271 RREB1Q92766 1687 aa24.21■■□□□ 1.47
CDC42BPB-208ENST00000561271 FAM208AQ9UK61 1670 aaKnown RBP24.21■■□□□ 1.47
CDC42BPB-208ENST00000561271 AXIN2Q9Y2T1 843 aa24.2■■□□□ 1.46
CDC42BPB-208ENST00000561271 WDR17Q8IZU2 1322 aa24.17■■□□□ 1.46
CDC42BPB-208ENST00000561271 THRAP3Q9Y2W1 955 aaKnown RBP24.17■■□□□ 1.46
CDC42BPB-208ENST00000561271 NUP188Q5SRE5 1749 aa24.17■■□□□ 1.46
CDC42BPB-208ENST00000561271 TOM1L2Q6ZVM7 507 aa24.16■■□□□ 1.46
CDC42BPB-208ENST00000561271 KAT6BQ8WYB5 2073 aa24.15■■□□□ 1.46
CDC42BPB-208ENST00000561271 TIMELESSQ9UNS1 1208 aa24.15■■□□□ 1.46
CDC42BPB-208ENST00000561271 ANKRD36BQ8N2N9 1353 aa24.15■■□□□ 1.46
CDC42BPB-208ENST00000561271 DISP2A7MBM2 1401 aa24.14■■□□□ 1.45
CDC42BPB-208ENST00000561271 BAG6P46379 1132 aa24.14■■□□□ 1.45
CDC42BPB-208ENST00000561271 TMF1P82094 1093 aa24.14■■□□□ 1.45
CDC42BPB-208ENST00000561271 PDE3BQ13370 1112 aa24.14■■□□□ 1.45
CDC42BPB-208ENST00000561271 SLC24A1O60721 1099 aa24.13■■□□□ 1.45
CDC42BPB-208ENST00000561271 RGPD3A6NKT7 1758 aaPredicted RBP24.13■■□□□ 1.45
CDC42BPB-208ENST00000561271 RGPD4Q7Z3J3 1758 aa24.13■■□□□ 1.45
CDC42BPB-208ENST00000561271 FAM196AQ6ZSG2 479 aa24.12■■□□□ 1.45
CDC42BPB-208ENST00000561271 CSB-PGBD3P0DP91 1061 aa24.11■■□□□ 1.45
CDC42BPB-208ENST00000561271 CCER1Q8TC90 406 aaPredicted RBP24.11■■□□□ 1.45
CDC42BPB-208ENST00000561271 TRIM37O94972 964 aa24.1■■□□□ 1.45
CDC42BPB-208ENST00000561271 OVOS2A0A0G2JMS6 1433 aa24.1■■□□□ 1.45
CDC42BPB-208ENST00000561271 EN1Q05925 392 aaPredicted RBP24.09■■□□□ 1.45
CDC42BPB-208ENST00000561271 ANKRD26Q9UPS8 1709 aa24.07■■□□□ 1.44
CDC42BPB-208ENST00000561271 ERBB3P21860 1342 aa24.07■■□□□ 1.44
CDC42BPB-208ENST00000561271 CARD10Q9BWT7 1032 aa24.06■■□□□ 1.44
CDC42BPB-208ENST00000561271 SRCAPQ6ZRS2 3230 aa24.06■■□□□ 1.44
CDC42BPB-208ENST00000561271 LRP5O75197 1615 aa24.06■■□□□ 1.44
CDC42BPB-208ENST00000561271 CCDC7Q96M83 1385 aa24.05■■□□□ 1.44
CDC42BPB-208ENST00000561271 DDB1Q16531 1140 aa24.05■■□□□ 1.44
CDC42BPB-208ENST00000561271 MAP2P11137 1827 aaKnown RBP24.05■■□□□ 1.44
CDC42BPB-208ENST00000561271 NHSQ6T4R5 1651 aa24.05■■□□□ 1.44
CDC42BPB-208ENST00000561271 SHANK3Q9BYB0 1731 aa24.04■■□□□ 1.44
CDC42BPB-208ENST00000561271 TNS2Q63HR2 1409 aa24.04■■□□□ 1.44
CDC42BPB-208ENST00000561271 COG3Q96JB2 828 aa24.03■■□□□ 1.44
CDC42BPB-208ENST00000561271 CDCA8Q53HL2 280 aa24.02■■□□□ 1.44
CDC42BPB-208ENST00000561271 EZH2Q15910 746 aaKnown RBP24.01■■□□□ 1.43
CDC42BPB-208ENST00000561271 CDCA7Q9BWT1 371 aaPredicted RBP24.01■■□□□ 1.43
CDC42BPB-208ENST00000561271 APBA3O96018 575 aa24■■□□□ 1.43
CDC42BPB-208ENST00000561271 ANKRD24Q8TF21 1146 aa24■■□□□ 1.43
CDC42BPB-208ENST00000561271 BTAF1O14981 1849 aa24■■□□□ 1.43
CDC42BPB-208ENST00000561271 NLRP2Q9NX02 1062 aa23.99■■□□□ 1.43
CDC42BPB-208ENST00000561271 NSD3Q9BZ95 1437 aa23.99■■□□□ 1.43
CDC42BPB-208ENST00000561271 PSDA5PKW4 1024 aaPredicted RBP23.98■■□□□ 1.43
CDC42BPB-208ENST00000561271 CAMKK2Q96RR4 588 aa23.98■■□□□ 1.43
CDC42BPB-208ENST00000561271 MAP3K19Q56UN5 1328 aa23.98■■□□□ 1.43
CDC42BPB-208ENST00000561271 PARD3Q8TEW0 1356 aa23.98■■□□□ 1.43
CDC42BPB-208ENST00000561271 FBLN1P23142 703 aa23.97■■□□□ 1.43
CDC42BPB-208ENST00000561271 MARCH10Q8NA82 808 aaPredicted RBP23.97■■□□□ 1.43
CDC42BPB-208ENST00000561271 GGNBP2Q9H3C7 697 aa23.97■■□□□ 1.43
CDC42BPB-208ENST00000561271 DOT1LQ8TEK3 1739 aa23.96■■□□□ 1.43
CDC42BPB-208ENST00000561271 IP6K1Q92551 441 aa23.96■■□□□ 1.43
CDC42BPB-208ENST00000561271 FYB1O15117 783 aa23.95■■□□□ 1.42
CDC42BPB-208ENST00000561271 LTV1Q96GA3 475 aaPredicted RBP23.95■■□□□ 1.42
CDC42BPB-208ENST00000561271 BCL9O00512 1426 aa23.94■■□□□ 1.42
CDC42BPB-208ENST00000561271 RTL1A6NKG5 1358 aa23.94■■□□□ 1.42
CDC42BPB-208ENST00000561271 C11orf95C9JLR9 678 aaPredicted RBP23.94■■□□□ 1.42
CDC42BPB-208ENST00000561271 HOXC9P31274 260 aa23.93■■□□□ 1.42
CDC42BPB-208ENST00000561271 AMPHP49418 695 aa23.92■■□□□ 1.42
CDC42BPB-208ENST00000561271 RRS1Q15050 365 aaKnown RBP23.92■■□□□ 1.42
CDC42BPB-208ENST00000561271 POLR3GLQ9BT43 218 aa23.92■■□□□ 1.42
CDC42BPB-208ENST00000561271 EXOC5O00471 708 aa23.91■■□□□ 1.42
CDC42BPB-208ENST00000561271 HSPA5P11021 654 aaKnown RBP23.91■■□□□ 1.42
CDC42BPB-208ENST00000561271 IL2RBP14784 551 aa23.91■■□□□ 1.42
CDC42BPB-208ENST00000561271 PTF1AQ7RTS3 328 aa23.91■■□□□ 1.42
CDC42BPB-208ENST00000561271 CARD14Q9BXL6 1004 aa23.91■■□□□ 1.42
CDC42BPB-208ENST00000561271 EIF4G2P78344 907 aaKnown RBP eCLIP23.9■■□□□ 1.42
CDC42BPB-208ENST00000561271 R3HDM1Q15032 1099 aaKnown RBP23.9■■□□□ 1.42
CDC42BPB-208ENST00000561271 MEGF6O75095 1541 aa23.87■■□□□ 1.41
CDC42BPB-208ENST00000561271 CASZ1Q86V15 1759 aa23.86■■□□□ 1.41
CDC42BPB-208ENST00000561271 BCL11BQ9C0K0 894 aaPredicted RBP23.86■■□□□ 1.41
CDC42BPB-208ENST00000561271 SMG6Q86US8 1419 aaKnown RBP23.85■■□□□ 1.41
CDC42BPB-208ENST00000561271 PKD1L3Q7Z443 1732 aa23.84■■□□□ 1.41
CDC42BPB-208ENST00000561271 FLT4P35916 1363 aa23.84■■□□□ 1.41
CDC42BPB-208ENST00000561271 ITGB4P16144 1822 aa23.82■■□□□ 1.4
CDC42BPB-208ENST00000561271 ACSBG1Q96GR2 724 aa23.81■■□□□ 1.4
CDC42BPB-208ENST00000561271 LY75O60449 1722 aa23.81■■□□□ 1.4
CDC42BPB-208ENST00000561271 CGNL1Q0VF96 1302 aa23.81■■□□□ 1.4
CDC42BPB-208ENST00000561271 PAPPAQ13219 1627 aa23.81■■□□□ 1.4
CDC42BPB-208ENST00000561271 INSRP06213 1382 aa23.8■■□□□ 1.4
CDC42BPB-208ENST00000561271 KIF24Q5T7B8 1368 aa23.8■■□□□ 1.4
CDC42BPB-208ENST00000561271 TUBGCP6Q96RT7 1819 aa23.8■■□□□ 1.4
CDC42BPB-208ENST00000561271 PLSCR1O15162 318 aa23.8■■□□□ 1.4
CDC42BPB-208ENST00000561271 KCNQ2O43526 872 aa23.8■■□□□ 1.4
CDC42BPB-208ENST00000561271 TOGARAM1Q9Y4F4 1720 aa23.79■■□□□ 1.4
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