RNA–Protein interactions for RNA: ENST00000561265.1

TRIP4-212, Transcript of thyroid hormone receptor interactor 4, humanhuman

TSL 3

Gene TRIP4, Length 1,039 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIP4-212ENST00000561265 PRR20CP86479 221 aa9.59□□□□□ -0.87
TRIP4-212ENST00000561265 PRR20DP86480 221 aa9.59□□□□□ -0.87
TRIP4-212ENST00000561265 PRR20BP86481 221 aa9.59□□□□□ -0.87
TRIP4-212ENST00000561265 PRR20AP86496 221 aa9.59□□□□□ -0.87
TRIP4-212ENST00000561265 HDGFL1Q5TGJ6 251 aa9.59□□□□□ -0.87
TRIP4-212ENST00000561265 MPNDQ8N594 471 aa9.59□□□□□ -0.87
TRIP4-212ENST00000561265 MAP4K5Q9Y4K4 846 aa9.59□□□□□ -0.87
TRIP4-212ENST00000561265 TLL2Q9Y6L7 1015 aa9.59□□□□□ -0.87
TRIP4-212ENST00000561265 WASF2Q9Y6W5 498 aa9.59□□□□□ -0.87
TRIP4-212ENST00000561265 SIAH2O43255 324 aa9.58□□□□□ -0.88
TRIP4-212ENST00000561265 ALDH1A1P00352 501 aa9.58□□□□□ -0.88
TRIP4-212ENST00000561265 PDZRN3Q9UPQ7 1066 aa9.58□□□□□ -0.88
TRIP4-212ENST00000561265 CDK15Q96Q40 435 aa9.57□□□□□ -0.88
TRIP4-212ENST00000561265 KCTD15Q96SI1 283 aaPredicted RBP9.57□□□□□ -0.88
TRIP4-212ENST00000561265 ACIN1Q9UKV3 1341 aaKnown RBP9.56□□□□□ -0.88
TRIP4-212ENST00000561265 PPP1R15AO75807 674 aaPredicted RBP9.56□□□□□ -0.88
TRIP4-212ENST00000561265 SLFNL1Q499Z3 407 aa9.56□□□□□ -0.88
TRIP4-212ENST00000561265 RNF20Q5VTR2 975 aa9.56□□□□□ -0.88
TRIP4-212ENST00000561265 TRIM52Q96A61 297 aa9.56□□□□□ -0.88
TRIP4-212ENST00000561265 ALG2Q9H553 416 aa9.56□□□□□ -0.88
TRIP4-212ENST00000561265 PODXL2Q9NZ53 605 aa9.56□□□□□ -0.88
TRIP4-212ENST00000561265 ADH1CP00326 375 aa9.55□□□□□ -0.88
TRIP4-212ENST00000561265 FSHRP23945 695 aa9.55□□□□□ -0.88
TRIP4-212ENST00000561265 TRIM26Q12899 539 aaPredicted RBP9.55□□□□□ -0.88
TRIP4-212ENST00000561265 CEP126Q9P2H0 1117 aa9.55□□□□□ -0.88
TRIP4-212ENST00000561265 NR5A1Q13285 461 aa9.54□□□□□ -0.88
TRIP4-212ENST00000561265 CCDC125Q86Z20 511 aa9.54□□□□□ -0.88
TRIP4-212ENST00000561265 SEPT12Q8IYM1 358 aa9.54□□□□□ -0.88
TRIP4-212ENST00000561265 RAB15P59190 212 aa9.53□□□□□ -0.88
TRIP4-212ENST00000561265 DHX9Q08211 1270 aaKnown RBP9.53□□□□□ -0.88
TRIP4-212ENST00000561265 TRIM67Q6ZTA4 783 aa9.53□□□□□ -0.88
TRIP4-212ENST00000561265 RNF135Q8IUD6 432 aa9.53□□□□□ -0.88
TRIP4-212ENST00000561265 TOR4AQ9NXH8 423 aa9.53□□□□□ -0.88
TRIP4-212ENST00000561265 GIGYF1O75420 1035 aaPredicted RBP9.52□□□□□ -0.89
TRIP4-212ENST00000561265 ZBTB7CA1YPR0 619 aa9.51□□□□□ -0.89
TRIP4-212ENST00000561265 GFRA3O60609 400 aa9.51□□□□□ -0.89
TRIP4-212ENST00000561265 LAPTM4AQ15012 233 aa9.51□□□□□ -0.89
TRIP4-212ENST00000561265 INTS6LQ5JSJ4 861 aaKnown RBP9.51□□□□□ -0.89
TRIP4-212ENST00000561265 ADAMTS19Q8TE59 1207 aa9.51□□□□□ -0.89
TRIP4-212ENST00000561265 ESPNB1AK53 854 aa9.5□□□□□ -0.89
TRIP4-212ENST00000561265 J3QL48 77 aa9.5□□□□□ -0.89
TRIP4-212ENST00000561265 GRM5P41594 1212 aa9.5□□□□□ -0.89
TRIP4-212ENST00000561265 NNTQ13423 1086 aa9.5□□□□□ -0.89
TRIP4-212ENST00000561265 CCDC116Q8IYX3 515 aa9.5□□□□□ -0.89
TRIP4-212ENST00000561265 TRAIPQ9BWF2 469 aa9.5□□□□□ -0.89
TRIP4-212ENST00000561265 FAM187AA6NFU0 413 aa9.49□□□□□ -0.89
TRIP4-212ENST00000561265 NRG2O14511 850 aaPredicted RBP9.49□□□□□ -0.89
TRIP4-212ENST00000561265 PDE4CQ08493 712 aa9.49□□□□□ -0.89
TRIP4-212ENST00000561265 IRX2Q9BZI1 471 aaPredicted RBP9.49□□□□□ -0.89
TRIP4-212ENST00000561265 PGPEP1Q9NXJ5 209 aa9.49□□□□□ -0.89
TRIP4-212ENST00000561265 SKIP12755 728 aa9.48□□□□□ -0.89
TRIP4-212ENST00000561265 PPP1R12CQ9BZL4 782 aa9.48□□□□□ -0.89
TRIP4-212ENST00000561265 ESF1Q9H501 851 aaKnown RBP9.48□□□□□ -0.89
TRIP4-212ENST00000561265 EMILIN1Q9Y6C2 1016 aa9.48□□□□□ -0.89
TRIP4-212ENST00000561265 SMPD1P17405 629 aa9.47□□□□□ -0.89
TRIP4-212ENST00000561265 MAP7D1Q3KQU3 841 aa9.47□□□□□ -0.89
TRIP4-212ENST00000561265 PKDCCQ504Y2 493 aa9.47□□□□□ -0.89
TRIP4-212ENST00000561265 NFATC2IPQ8NCF5 419 aa9.47□□□□□ -0.89
TRIP4-212ENST00000561265 PBXIP1Q96AQ6 731 aa9.47□□□□□ -0.89
TRIP4-212ENST00000561265 DOLKQ9UPQ8 538 aa9.47□□□□□ -0.89
TRIP4-212ENST00000561265 PCDHB11Q9Y5F2 797 aa9.47□□□□□ -0.89
TRIP4-212ENST00000561265 RFX1P22670 979 aa9.46□□□□□ -0.9
TRIP4-212ENST00000561265 PPP1R26Q5T8A7 1209 aaPredicted RBP9.46□□□□□ -0.9
TRIP4-212ENST00000561265 RETREG2Q8NC44 543 aa9.46□□□□□ -0.9
TRIP4-212ENST00000561265 ERVH48-1M5A8F1 160 aa9.45□□□□□ -0.9
TRIP4-212ENST00000561265 NR3C2P08235 984 aa9.45□□□□□ -0.9
TRIP4-212ENST00000561265 KCTD17Q8N5Z5 321 aa9.45□□□□□ -0.9
TRIP4-212ENST00000561265 PLPP7Q8NBV4 271 aa9.45□□□□□ -0.9
TRIP4-212ENST00000561265 PIK3CDO00329 1044 aa9.44□□□□□ -0.9
TRIP4-212ENST00000561265 ATP9BO43861 1147 aa9.44□□□□□ -0.9
TRIP4-212ENST00000561265 DGAT1O75907 488 aa9.44□□□□□ -0.9
TRIP4-212ENST00000561265 WDR4P57081 412 aaKnown RBP9.44□□□□□ -0.9
TRIP4-212ENST00000561265 CFAP70Q5T0N1 1121 aa9.44□□□□□ -0.9
TRIP4-212ENST00000561265 PHTF2Q8N3S3 785 aa9.44□□□□□ -0.9
TRIP4-212ENST00000561265 SIRT1Q96EB6 747 aa9.44□□□□□ -0.9
TRIP4-212ENST00000561265 UCN2Q96RP3 112 aa9.44□□□□□ -0.9
TRIP4-212ENST00000561265 PALM3A6NDB9 673 aaPredicted RBP9.43□□□□□ -0.9
TRIP4-212ENST00000561265 LZTS3O60299 673 aaPredicted RBP9.43□□□□□ -0.9
TRIP4-212ENST00000561265 MYCP01106 439 aaPredicted RBP9.43□□□□□ -0.9
TRIP4-212ENST00000561265 MYT1Q01538 1121 aa9.43□□□□□ -0.9
TRIP4-212ENST00000561265 EML3Q32P44 896 aa9.43□□□□□ -0.9
TRIP4-212ENST00000561265 OXLD1Q5BKU9 147 aa9.43□□□□□ -0.9
TRIP4-212ENST00000561265 TBC1D9Q6ZT07 1266 aa9.43□□□□□ -0.9
TRIP4-212ENST00000561265 TFIP11Q9UBB9 837 aaKnown RBP9.43□□□□□ -0.9
TRIP4-212ENST00000561265 USP17L5A8MUK1 530 aa9.42□□□□□ -0.9
TRIP4-212ENST00000561265 LMOD1P29536 600 aaPredicted RBP9.42□□□□□ -0.9
TRIP4-212ENST00000561265 USP4Q13107 963 aa9.42□□□□□ -0.9
TRIP4-212ENST00000561265 HPS1Q92902 700 aa9.42□□□□□ -0.9
TRIP4-212ENST00000561265 CCDC85AQ96PX6 553 aaPredicted RBP9.42□□□□□ -0.9
TRIP4-212ENST00000561265 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.41□□□□□ -0.9
TRIP4-212ENST00000561265 ZIC2O95409 532 aaPredicted RBP9.41□□□□□ -0.9
TRIP4-212ENST00000561265 TMPRSS4Q9NRS4 437 aa9.41□□□□□ -0.9
TRIP4-212ENST00000561265 CSB-PGBD3P0DP91 1061 aa9.4□□□□□ -0.9
TRIP4-212ENST00000561265 CC2D2BQ6DHV5 1058 aa9.4□□□□□ -0.9
TRIP4-212ENST00000561265 ZNF784Q8NCA9 323 aaPredicted RBP9.4□□□□□ -0.9
TRIP4-212ENST00000561265 CYLDQ9NQC7 956 aa9.4□□□□□ -0.9
TRIP4-212ENST00000561265 CHIC2Q9UKJ5 165 aa9.4□□□□□ -0.9
TRIP4-212ENST00000561265 USP17L3A6NCW0 530 aa9.39□□□□□ -0.91
TRIP4-212ENST00000561265 USP17L4A6NCW7 530 aa9.39□□□□□ -0.91
TRIP4-212ENST00000561265 CAPN5O15484 640 aaPredicted RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms