RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 GGT6Q6P531 493 aa8.07□□□□□ -1.12
ZEB1-220ENST00000560909 TRIM52Q96A61 297 aa8.07□□□□□ -1.12
ZEB1-220ENST00000560909 KANK1Q14678 1352 aa8.07□□□□□ -1.12
ZEB1-220ENST00000560909 IQGAP3Q86VI3 1631 aa8.07□□□□□ -1.12
ZEB1-220ENST00000560909 PTPRTO14522 1441 aa8.06□□□□□ -1.12
ZEB1-220ENST00000560909 TOR4AQ9NXH8 423 aa8.06□□□□□ -1.12
ZEB1-220ENST00000560909 NXF1Q9UBU9 619 aaKnown RBP8.06□□□□□ -1.12
ZEB1-220ENST00000560909 ABCC3O15438 1527 aa8.06□□□□□ -1.12
ZEB1-220ENST00000560909 ANKRD30BQ9BXX2 1392 aa8.06□□□□□ -1.12
ZEB1-220ENST00000560909 CNTLNQ9NXG0 1405 aa8.05□□□□□ -1.12
ZEB1-220ENST00000560909 RASSF7Q02833 373 aa8.05□□□□□ -1.12
ZEB1-220ENST00000560909 PKD2Q13563 968 aa8.05□□□□□ -1.12
ZEB1-220ENST00000560909 PLA2R1Q13018 1463 aa8.05□□□□□ -1.12
ZEB1-220ENST00000560909 RPRD2Q5VT52 1461 aaKnown RBP8.05□□□□□ -1.12
ZEB1-220ENST00000560909 WASHC2CQ9Y4E1 1318 aa8.04□□□□□ -1.12
ZEB1-220ENST00000560909 NOS1P29475 1434 aa8.03□□□□□ -1.12
ZEB1-220ENST00000560909 NPATQ14207 1427 aa8.03□□□□□ -1.12
ZEB1-220ENST00000560909 ZMYM3Q14202 1370 aa8.03□□□□□ -1.12
ZEB1-220ENST00000560909 LCE3BQ5TA77 95 aa8.03□□□□□ -1.12
ZEB1-220ENST00000560909 EFCAB6Q5THR3 1501 aa8.03□□□□□ -1.12
ZEB1-220ENST00000560909 ARID4BQ4LE39 1312 aaPredicted RBP8.03□□□□□ -1.12
ZEB1-220ENST00000560909 TET3O43151 1660 aa8.02□□□□□ -1.13
ZEB1-220ENST00000560909 S1PR4O95977 384 aa8.02□□□□□ -1.13
ZEB1-220ENST00000560909 CYP4X1Q8N118 509 aa8.02□□□□□ -1.13
ZEB1-220ENST00000560909 TLL1O43897 1013 aa8.01□□□□□ -1.13
ZEB1-220ENST00000560909 GPAT2Q6NUI2 795 aa8.01□□□□□ -1.13
ZEB1-220ENST00000560909 CRISPLD2Q9H0B8 497 aa8.01□□□□□ -1.13
ZEB1-220ENST00000560909 ADAMTSL3P82987 1691 aa8.01□□□□□ -1.13
ZEB1-220ENST00000560909 ZC3H13Q5T200 1668 aaKnown RBP8.01□□□□□ -1.13
ZEB1-220ENST00000560909 MLECQ14165 292 aa8□□□□□ -1.13
ZEB1-220ENST00000560909 PLA2G2CQ5R387 149 aa8□□□□□ -1.13
ZEB1-220ENST00000560909 KIFC2Q96AC6 838 aa8□□□□□ -1.13
ZEB1-220ENST00000560909 TIMELESSQ9UNS1 1208 aa8□□□□□ -1.13
ZEB1-220ENST00000560909 CCER1Q8TC90 406 aaPredicted RBP7.99□□□□□ -1.13
ZEB1-220ENST00000560909 SLC52A1Q9NWF4 448 aa7.99□□□□□ -1.13
ZEB1-220ENST00000560909 ERVK-7P63135 1459 aa7.99□□□□□ -1.13
ZEB1-220ENST00000560909 ERBB4Q15303 1308 aa7.99□□□□□ -1.13
ZEB1-220ENST00000560909 MROH2AA6NES4 1674 aa7.98□□□□□ -1.13
ZEB1-220ENST00000560909 SPATA31D1Q6ZQQ2 1576 aa7.98□□□□□ -1.13
ZEB1-220ENST00000560909 VEGFBP49765 207 aa7.98□□□□□ -1.13
ZEB1-220ENST00000560909 FBXO31Q5XUX0 539 aaPredicted RBP7.98□□□□□ -1.13
ZEB1-220ENST00000560909 E9PCH4 1651 aa7.98□□□□□ -1.13
ZEB1-220ENST00000560909 TRPM2O94759 1503 aa7.98□□□□□ -1.13
ZEB1-220ENST00000560909 NEURL4Q96JN8 1562 aa7.97□□□□□ -1.13
ZEB1-220ENST00000560909 CAMSAP1Q5T5Y3 1602 aa7.97□□□□□ -1.13
ZEB1-220ENST00000560909 HDGFP51858 240 aaKnown RBP7.97□□□□□ -1.13
ZEB1-220ENST00000560909 NPAS3Q8IXF0 933 aa7.97□□□□□ -1.13
ZEB1-220ENST00000560909 NECTIN2Q92692 538 aa7.97□□□□□ -1.13
ZEB1-220ENST00000560909 RBM33Q96EV2 1170 aaKnown RBP7.97□□□□□ -1.13
ZEB1-220ENST00000560909 ESF1Q9H501 851 aaKnown RBP7.97□□□□□ -1.13
ZEB1-220ENST00000560909 SPATA31E1Q6ZUB1 1445 aa7.96□□□□□ -1.13
ZEB1-220ENST00000560909 CEP152O94986 1710 aa7.96□□□□□ -1.14
ZEB1-220ENST00000560909 IDI1Q13907 227 aa7.96□□□□□ -1.14
ZEB1-220ENST00000560909 SIN3AQ96ST3 1273 aa7.96□□□□□ -1.14
ZEB1-220ENST00000560909 EPAS1Q99814 870 aa7.96□□□□□ -1.14
ZEB1-220ENST00000560909 PTPRMP28827 1452 aa7.95□□□□□ -1.14
ZEB1-220ENST00000560909 BLOC1S3Q6QNY0 202 aa7.95□□□□□ -1.14
ZEB1-220ENST00000560909 PCDHB3Q9Y5E6 796 aa7.95□□□□□ -1.14
ZEB1-220ENST00000560909 SYNMO15061 1565 aa7.95□□□□□ -1.14
ZEB1-220ENST00000560909 MADDQ8WXG6 1647 aa7.95□□□□□ -1.14
ZEB1-220ENST00000560909 CLTCQ00610 1675 aaKnown RBP7.95□□□□□ -1.14
ZEB1-220ENST00000560909 TNRQ92752 1358 aa7.95□□□□□ -1.14
ZEB1-220ENST00000560909 CCDC144AA2RUR9 1427 aa7.95□□□□□ -1.14
ZEB1-220ENST00000560909 PIK3C2BO00750 1634 aa7.94□□□□□ -1.14
ZEB1-220ENST00000560909 H3BM21 787 aa7.94□□□□□ -1.14
ZEB1-220ENST00000560909 IGHA1P01876 353 aa7.94□□□□□ -1.14
ZEB1-220ENST00000560909 CEBPAP49715 358 aaPredicted RBP7.94□□□□□ -1.14
ZEB1-220ENST00000560909 NLRP1Q9C000 1473 aa7.94□□□□□ -1.14
ZEB1-220ENST00000560909 ECM2O94769 699 aaPredicted RBP7.93□□□□□ -1.14
ZEB1-220ENST00000560909 PREX1Q8TCU6 1659 aa7.92□□□□□ -1.14
ZEB1-220ENST00000560909 FER1L4A9Z1Z3 1794 aa7.92□□□□□ -1.14
ZEB1-220ENST00000560909 SETD1BQ9UPS6 1966 aaKnown RBP7.92□□□□□ -1.14
ZEB1-220ENST00000560909 C3orf80F5H4A9 247 aa7.92□□□□□ -1.14
ZEB1-220ENST00000560909 ZEB1P37275 1124 aaPredicted RBP7.92□□□□□ -1.14
ZEB1-220ENST00000560909 RPGRIP1LQ68CZ1 1315 aa7.92□□□□□ -1.14
ZEB1-220ENST00000560909 CLTCL1P53675 1640 aa7.92□□□□□ -1.14
ZEB1-220ENST00000560909 C3P01024 1663 aa7.92□□□□□ -1.14
ZEB1-220ENST00000560909 SPHKAPQ2M3C7 1700 aa7.92□□□□□ -1.14
ZEB1-220ENST00000560909 PPP1R15AO75807 674 aaPredicted RBP7.91□□□□□ -1.14
ZEB1-220ENST00000560909 TATDN2Q93075 761 aa7.91□□□□□ -1.14
ZEB1-220ENST00000560909 L3MBTL2Q969R5 705 aa7.91□□□□□ -1.14
ZEB1-220ENST00000560909 ZFYVE9O95405 1425 aa7.91□□□□□ -1.14
ZEB1-220ENST00000560909 A2ML1A8K2U0 1454 aa7.91□□□□□ -1.14
ZEB1-220ENST00000560909 ADGRB3O60242 1522 aa7.91□□□□□ -1.14
ZEB1-220ENST00000560909 UGGT1Q9NYU2 1555 aa7.9□□□□□ -1.14
ZEB1-220ENST00000560909 UHRF1BP1Q6BDS2 1440 aa7.9□□□□□ -1.14
ZEB1-220ENST00000560909 TTC24A2A3L6 582 aaPredicted RBP7.9□□□□□ -1.14
ZEB1-220ENST00000560909 RNF225M0QZC1 329 aaPredicted RBP7.9□□□□□ -1.14
ZEB1-220ENST00000560909 NEUROD1Q13562 356 aa7.9□□□□□ -1.14
ZEB1-220ENST00000560909 KRTAP9-9Q9BYP9 154 aa7.9□□□□□ -1.14
ZEB1-220ENST00000560909 KRTAP9-4Q9BYQ2 154 aa7.9□□□□□ -1.14
ZEB1-220ENST00000560909 FAM198AQ9UFP1 575 aa7.9□□□□□ -1.14
ZEB1-220ENST00000560909 PNMA3Q9UL41 463 aa7.9□□□□□ -1.14
ZEB1-220ENST00000560909 KDM5AP29375 1690 aaKnown RBP7.89□□□□□ -1.15
ZEB1-220ENST00000560909 RIMS1Q86UR5 1692 aaKnown RBP7.89□□□□□ -1.15
ZEB1-220ENST00000560909 TMEM131LA2VDJ0 1609 aa7.89□□□□□ -1.15
ZEB1-220ENST00000560909 ARHGAP23Q9P227 1491 aa7.88□□□□□ -1.15
ZEB1-220ENST00000560909 NRXN1Q9ULB1 1477 aa7.88□□□□□ -1.15
ZEB1-220ENST00000560909 TMEM2Q9UHN6 1383 aa7.88□□□□□ -1.15
ZEB1-220ENST00000560909 KRTAP4-8A0A0G2JLE6 195 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms