RNA–Protein interactions for RNA: ENST00000560861.1

SNX1-212, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-212ENST00000560861 PPM1GO15355 546 aaPredicted RBP15□□□□□ -0.01
SNX1-212ENST00000560861 U2AF1L5P0DN76 240 aaPredicted RBP15□□□□□ -0.01
SNX1-212ENST00000560861 U2AF1Q01081 240 aaKnown RBP eCLIP15□□□□□ -0.01
SNX1-212ENST00000560861 HSP90AB2PQ58FF8 381 aa15□□□□□ -0.01
SNX1-212ENST00000560861 RUNDC1Q96C34 613 aa15□□□□□ -0.01
SNX1-212ENST00000560861 ABCC6O95255 1503 aa15□□□□□ -0.01
SNX1-212ENST00000560861 SOX12O15370 315 aa14.99□□□□□ -0.01
SNX1-212ENST00000560861 GCP02774 474 aa14.99□□□□□ -0.01
SNX1-212ENST00000560861 HOXC9P31274 260 aa14.99□□□□□ -0.01
SNX1-212ENST00000560861 NCBP3Q53F19 620 aaKnown RBP14.99□□□□□ -0.01
SNX1-212ENST00000560861 RSPH6AQ9H0K4 717 aa14.99□□□□□ -0.01
SNX1-212ENST00000560861 CAMTA1Q9Y6Y1 1673 aa14.98□□□□□ -0.01
SNX1-212ENST00000560861 SENP3-EIF4A1A0A087X0R7 540 aa14.98□□□□□ -0.01
SNX1-212ENST00000560861 APAF1O14727 1248 aa14.98□□□□□ -0.01
SNX1-212ENST00000560861 U2SURPO15042 1029 aaKnown RBP14.98□□□□□ -0.01
SNX1-212ENST00000560861 TOM1O60784 492 aa14.98□□□□□ -0.01
SNX1-212ENST00000560861 PIP4K2BP78356 416 aa14.98□□□□□ -0.01
SNX1-212ENST00000560861 ARHGEF25Q86VW2 580 aa14.98□□□□□ -0.01
SNX1-212ENST00000560861 NGEFQ8N5V2 710 aa14.98□□□□□ -0.01
SNX1-212ENST00000560861 COL22A1Q8NFW1 1626 aaPredicted RBP14.97□□□□□ -0.01
SNX1-212ENST00000560861 FCHSD2O94868 740 aa14.97□□□□□ -0.01
SNX1-212ENST00000560861 HSPA1LP34931 641 aa14.97□□□□□ -0.01
SNX1-212ENST00000560861 IP6K1Q92551 441 aa14.97□□□□□ -0.01
SNX1-212ENST00000560861 RGPD5Q99666 1765 aa14.97□□□□□ -0.01
SNX1-212ENST00000560861 KDRP35968 1356 aa14.97□□□□□ -0.01
SNX1-212ENST00000560861 COL16A1Q07092 1604 aaPredicted RBP14.96□□□□□ -0.01
SNX1-212ENST00000560861 AMPHP49418 695 aa14.96□□□□□ -0.01
SNX1-212ENST00000560861 PDE3BQ13370 1112 aa14.96□□□□□ -0.01
SNX1-212ENST00000560861 NCAPD2Q15021 1401 aa14.96□□□□□ -0.01
SNX1-212ENST00000560861 LMO7Q8WWI1 1683 aa14.96□□□□□ -0.01
SNX1-212ENST00000560861 RGPD2P0DJD1 1756 aa14.96□□□□□ -0.02
SNX1-212ENST00000560861 IGSF1Q8N6C5 1336 aa14.95□□□□□ -0.02
SNX1-212ENST00000560861 TCP11L2Q8N4U5 519 aa14.95□□□□□ -0.02
SNX1-212ENST00000560861 CPDO75976 1380 aa14.95□□□□□ -0.02
SNX1-212ENST00000560861 DLG5Q8TDM6 1919 aa14.94□□□□□ -0.02
SNX1-212ENST00000560861 MAPK8IP2Q13387 824 aaPredicted RBP14.94□□□□□ -0.02
SNX1-212ENST00000560861 CCDC27Q2M243 656 aa14.94□□□□□ -0.02
SNX1-212ENST00000560861 LMOD2Q6P5Q4 547 aa14.94□□□□□ -0.02
SNX1-212ENST00000560861 PRKAR2BP31323 418 aa14.93□□□□□ -0.02
SNX1-212ENST00000560861 PHLPP1O60346 1717 aa14.92□□□□□ -0.02
SNX1-212ENST00000560861 HMOX1P09601 288 aa14.92□□□□□ -0.02
SNX1-212ENST00000560861 AEBP1Q8IUX7 1158 aa14.92□□□□□ -0.02
SNX1-212ENST00000560861 EYA1Q99502 592 aa14.92□□□□□ -0.02
SNX1-212ENST00000560861 PNNQ9H307 717 aaKnown RBP14.92□□□□□ -0.02
SNX1-212ENST00000560861 SALL2Q9Y467 1007 aaPredicted RBP14.92□□□□□ -0.02
SNX1-212ENST00000560861 FAM208AQ9UK61 1670 aaKnown RBP14.91□□□□□ -0.02
SNX1-212ENST00000560861 TMPOP42166 694 aaKnown RBP14.91□□□□□ -0.02
SNX1-212ENST00000560861 CABLES1Q8TDN4 633 aa14.91□□□□□ -0.02
SNX1-212ENST00000560861 CDCA7LQ96GN5 454 aa14.91□□□□□ -0.02
SNX1-212ENST00000560861 PHACTR3Q96KR7 559 aa14.91□□□□□ -0.02
SNX1-212ENST00000560861 WWC1Q8IX03 1113 aa14.9□□□□□ -0.02
SNX1-212ENST00000560861 TRMT2AQ8IZ69 625 aaKnown RBP14.9□□□□□ -0.02
SNX1-212ENST00000560861 SULT6B1Q6IMI4 303 aa14.89□□□□□ -0.03
SNX1-212ENST00000560861 TRIM35Q9UPQ4 493 aa14.89□□□□□ -0.03
SNX1-212ENST00000560861 AXIN2Q9Y2T1 843 aa14.89□□□□□ -0.03
SNX1-212ENST00000560861 RRP7AQ9Y3A4 280 aaKnown RBP14.89□□□□□ -0.03
SNX1-212ENST00000560861 MAPK8IP3Q9UPT6 1336 aa14.89□□□□□ -0.03
SNX1-212ENST00000560861 KIAA0232Q92628 1395 aa14.88□□□□□ -0.03
SNX1-212ENST00000560861 ZC3H6P61129 1189 aaKnown RBP14.88□□□□□ -0.03
SNX1-212ENST00000560861 NFE2L2Q16236 605 aa14.88□□□□□ -0.03
SNX1-212ENST00000560861 GOLGA2Q08379 1002 aa14.87□□□□□ -0.03
SNX1-212ENST00000560861 SLFN5Q08AF3 891 aa14.87□□□□□ -0.03
SNX1-212ENST00000560861 SPINK5Q9NQ38 1064 aaPredicted RBP14.87□□□□□ -0.03
SNX1-212ENST00000560861 SOCS7O14512 581 aa14.86□□□□□ -0.03
SNX1-212ENST00000560861 NBPF6Q5VWK0 638 aa14.86□□□□□ -0.03
SNX1-212ENST00000560861 DUSP27Q5VZP5 1158 aa14.86□□□□□ -0.03
SNX1-212ENST00000560861 WDR63Q8IWG1 891 aa14.86□□□□□ -0.03
SNX1-212ENST00000560861 LRRC59Q96AG4 307 aaKnown RBP14.86□□□□□ -0.03
SNX1-212ENST00000560861 NBPF4Q96M43 638 aa14.86□□□□□ -0.03
SNX1-212ENST00000560861 ERBB3P21860 1342 aa14.86□□□□□ -0.03
SNX1-212ENST00000560861 PLEKHG5O94827 1062 aa14.85□□□□□ -0.03
SNX1-212ENST00000560861 ANKRD24Q8TF21 1146 aa14.85□□□□□ -0.03
SNX1-212ENST00000560861 LTV1Q96GA3 475 aaPredicted RBP14.84□□□□□ -0.03
SNX1-212ENST00000560861 COL14A1Q05707 1796 aaKnown RBP14.83□□□□□ -0.03
SNX1-212ENST00000560861 ZBTB7CA1YPR0 619 aa14.83□□□□□ -0.04
SNX1-212ENST00000560861 RIPK4P57078 832 aa14.83□□□□□ -0.04
SNX1-212ENST00000560861 NEUROD2Q15784 382 aa14.83□□□□□ -0.04
SNX1-212ENST00000560861 LRRC37A3O60309 1634 aa14.83□□□□□ -0.04
SNX1-212ENST00000560861 IL16Q14005 1332 aa14.83□□□□□ -0.04
SNX1-212ENST00000560861 RNF123Q5XPI4 1314 aa14.83□□□□□ -0.04
SNX1-212ENST00000560861 E9PSI1 815 aa14.82□□□□□ -0.04
SNX1-212ENST00000560861 CHRNA2Q15822 529 aa14.82□□□□□ -0.04
SNX1-212ENST00000560861 COL5A2P05997 1499 aaPredicted RBP14.82□□□□□ -0.04
SNX1-212ENST00000560861 NEFMP07197 916 aa14.81□□□□□ -0.04
SNX1-212ENST00000560861 USHBP1Q8N6Y0 703 aa14.81□□□□□ -0.04
SNX1-212ENST00000560861 PLEKHG2Q9H7P9 1386 aa14.81□□□□□ -0.04
SNX1-212ENST00000560861 MTHFSDQ2M296 383 aaKnown RBP14.8□□□□□ -0.04
SNX1-212ENST00000560861 PLCH1Q4KWH8 1693 aa14.79□□□□□ -0.04
SNX1-212ENST00000560861 PKD1L3Q7Z443 1732 aa14.79□□□□□ -0.04
SNX1-212ENST00000560861 PRDM11Q9NQV5 511 aa14.79□□□□□ -0.04
SNX1-212ENST00000560861 ADAMTS7Q9UKP4 1686 aa14.79□□□□□ -0.04
SNX1-212ENST00000560861 NRAPQ86VF7 1730 aa14.78□□□□□ -0.04
SNX1-212ENST00000560861 VIRMAQ69YN4 1812 aaKnown RBP14.78□□□□□ -0.04
SNX1-212ENST00000560861 WDR17Q8IZU2 1322 aa14.77□□□□□ -0.04
SNX1-212ENST00000560861 FAM83GA6ND36 823 aa14.77□□□□□ -0.05
SNX1-212ENST00000560861 ZNF853P0CG23 659 aa14.77□□□□□ -0.05
SNX1-212ENST00000560861 LMOD3Q0VAK6 560 aa14.77□□□□□ -0.05
SNX1-212ENST00000560861 GAS2L2Q8NHY3 880 aa14.77□□□□□ -0.05
SNX1-212ENST00000560861 SUPT16HQ9Y5B9 1047 aaKnown RBP14.77□□□□□ -0.05
SNX1-212ENST00000560861 MEGF6O75095 1541 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms