RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 PXYLP1Q8TE99 480 aa7.99□□□□□ -1.13
SNRPA1-209ENST00000560307 TBC1D2Q9BYX2 928 aa7.99□□□□□ -1.13
SNRPA1-209ENST00000560307 ADGRG1Q9Y653 693 aa7.99□□□□□ -1.13
SNRPA1-209ENST00000560307 WASHC2CQ9Y4E1 1318 aa7.99□□□□□ -1.13
SNRPA1-209ENST00000560307 SPDYE5A6NIY4 337 aa7.98□□□□□ -1.13
SNRPA1-209ENST00000560307 CD2BP2O95400 341 aaKnown RBP7.98□□□□□ -1.13
SNRPA1-209ENST00000560307 RBM27Q9P2N5 1060 aaKnown RBP7.98□□□□□ -1.13
SNRPA1-209ENST00000560307 NXF1Q9UBU9 619 aaKnown RBP7.98□□□□□ -1.13
SNRPA1-209ENST00000560307 SERPINA10Q9UK55 444 aa7.98□□□□□ -1.13
SNRPA1-209ENST00000560307 CC2D2AQ9P2K1 1620 aa7.98□□□□□ -1.13
SNRPA1-209ENST00000560307 FMN1Q68DA7 1419 aa7.97□□□□□ -1.13
SNRPA1-209ENST00000560307 NR1I2O75469 434 aa7.97□□□□□ -1.13
SNRPA1-209ENST00000560307 RFC5P40937 340 aa7.97□□□□□ -1.13
SNRPA1-209ENST00000560307 RPIAP49247 311 aa7.97□□□□□ -1.13
SNRPA1-209ENST00000560307 NPM2Q86SE8 214 aaKnown RBP7.97□□□□□ -1.13
SNRPA1-209ENST00000560307 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.97□□□□□ -1.13
SNRPA1-209ENST00000560307 SNRKQ9NRH2 765 aa7.97□□□□□ -1.13
SNRPA1-209ENST00000560307 COG6Q9Y2V7 657 aa7.97□□□□□ -1.13
SNRPA1-209ENST00000560307 CFTRP13569 1480 aa7.97□□□□□ -1.13
SNRPA1-209ENST00000560307 CUL7Q14999 1698 aa7.97□□□□□ -1.13
SNRPA1-209ENST00000560307 SUPT6HQ7KZ85 1726 aaKnown RBP7.97□□□□□ -1.13
SNRPA1-209ENST00000560307 PPM1GO15355 546 aaPredicted RBP7.96□□□□□ -1.14
SNRPA1-209ENST00000560307 VEGFBP49765 207 aa7.96□□□□□ -1.14
SNRPA1-209ENST00000560307 DIXDC1Q155Q3 683 aa7.96□□□□□ -1.14
SNRPA1-209ENST00000560307 RBM46Q8TBY0 533 aaKnown RBP7.96□□□□□ -1.14
SNRPA1-209ENST00000560307 ZNF330Q9Y3S2 320 aaPredicted RBP7.96□□□□□ -1.14
SNRPA1-209ENST00000560307 EHBP1L1Q8N3D4 1523 aa7.96□□□□□ -1.14
SNRPA1-209ENST00000560307 NAIPQ13075 1403 aa7.95□□□□□ -1.14
SNRPA1-209ENST00000560307 ACTN4O43707 911 aaKnown RBP7.95□□□□□ -1.14
SNRPA1-209ENST00000560307 CSPP1Q1MSJ5 1256 aa7.95□□□□□ -1.14
SNRPA1-209ENST00000560307 FNBP4Q8N3X1 1017 aaPredicted RBP7.95□□□□□ -1.14
SNRPA1-209ENST00000560307 CCDC7Q96M83 1385 aa7.95□□□□□ -1.14
SNRPA1-209ENST00000560307 TCOF1Q13428 1488 aaKnown RBP7.94□□□□□ -1.14
SNRPA1-209ENST00000560307 IGF1RP08069 1367 aa7.94□□□□□ -1.14
SNRPA1-209ENST00000560307 ARHGEF11O15085 1522 aa7.93□□□□□ -1.14
SNRPA1-209ENST00000560307 CFHP08603 1231 aa7.93□□□□□ -1.14
SNRPA1-209ENST00000560307 EIF4G2P78344 907 aaKnown RBP eCLIP7.93□□□□□ -1.14
SNRPA1-209ENST00000560307 RIC3Q7Z5B4 369 aa7.93□□□□□ -1.14
SNRPA1-209ENST00000560307 WWC1Q8IX03 1113 aa7.93□□□□□ -1.14
SNRPA1-209ENST00000560307 BANK1Q8NDB2 785 aa7.93□□□□□ -1.14
SNRPA1-209ENST00000560307 CCDC136Q96JN2 1154 aa7.93□□□□□ -1.14
SNRPA1-209ENST00000560307 PRKRIP1Q9H875 184 aaPredicted RBP7.93□□□□□ -1.14
SNRPA1-209ENST00000560307 LIMD1Q9UGP4 676 aa7.93□□□□□ -1.14
SNRPA1-209ENST00000560307 NUDCQ9Y266 331 aa7.93□□□□□ -1.14
SNRPA1-209ENST00000560307 CCDC9Q9Y3X0 531 aaKnown RBP7.93□□□□□ -1.14
SNRPA1-209ENST00000560307 TCERG1O14776 1098 aaKnown RBP7.92□□□□□ -1.14
SNRPA1-209ENST00000560307 SMPD1P17405 629 aa7.92□□□□□ -1.14
SNRPA1-209ENST00000560307 IRX6P78412 446 aaPredicted RBP7.92□□□□□ -1.14
SNRPA1-209ENST00000560307 FAM50AQ14320 339 aaKnown RBP7.92□□□□□ -1.14
SNRPA1-209ENST00000560307 TMEM259Q4ZIN3 620 aa7.92□□□□□ -1.14
SNRPA1-209ENST00000560307 B4GALNT3Q6L9W6 998 aa7.92□□□□□ -1.14
SNRPA1-209ENST00000560307 NUTM1Q86Y26 1132 aa7.92□□□□□ -1.14
SNRPA1-209ENST00000560307 SALL2Q9Y467 1007 aaPredicted RBP7.92□□□□□ -1.14
SNRPA1-209ENST00000560307 CARMIL1Q5VZK9 1371 aa7.92□□□□□ -1.14
SNRPA1-209ENST00000560307 MYOM3Q5VTT5 1437 aa7.92□□□□□ -1.14
SNRPA1-209ENST00000560307 MIA2Q96PC5 1412 aa7.92□□□□□ -1.14
SNRPA1-209ENST00000560307 SNAPC4Q5SXM2 1469 aa7.92□□□□□ -1.14
SNRPA1-209ENST00000560307 SAMD9Q5K651 1589 aa7.92□□□□□ -1.14
SNRPA1-209ENST00000560307 HSPA5P11021 654 aaKnown RBP7.91□□□□□ -1.14
SNRPA1-209ENST00000560307 KCNMA1Q12791 1236 aa7.91□□□□□ -1.14
SNRPA1-209ENST00000560307 AEBP1Q8IUX7 1158 aa7.91□□□□□ -1.14
SNRPA1-209ENST00000560307 SPIRE2Q8WWL2 714 aa7.91□□□□□ -1.14
SNRPA1-209ENST00000560307 GDPD2Q9HCC8 539 aa7.91□□□□□ -1.14
SNRPA1-209ENST00000560307 FCF1Q9Y324 198 aaKnown RBP7.91□□□□□ -1.14
SNRPA1-209ENST00000560307 UGGT2Q9NYU1 1516 aa7.91□□□□□ -1.14
SNRPA1-209ENST00000560307 ZMYM4Q5VZL5 1548 aa7.9□□□□□ -1.14
SNRPA1-209ENST00000560307 ARID4BQ4LE39 1312 aaPredicted RBP7.9□□□□□ -1.14
SNRPA1-209ENST00000560307 DDX11L8A8MPP1 907 aa7.9□□□□□ -1.14
SNRPA1-209ENST00000560307 ABL2P42684 1182 aa7.9□□□□□ -1.14
SNRPA1-209ENST00000560307 XP32Q5T750 250 aa7.9□□□□□ -1.14
SNRPA1-209ENST00000560307 FBXO31Q5XUX0 539 aaPredicted RBP7.9□□□□□ -1.14
SNRPA1-209ENST00000560307 TMEM151AQ8N4L1 468 aa7.9□□□□□ -1.14
SNRPA1-209ENST00000560307 LRRIQ1Q96JM4 1722 aa7.89□□□□□ -1.15
SNRPA1-209ENST00000560307 KTN1Q86UP2 1357 aaKnown RBP7.89□□□□□ -1.15
SNRPA1-209ENST00000560307 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.89□□□□□ -1.15
SNRPA1-209ENST00000560307 RCCD1A6NED2 376 aa7.89□□□□□ -1.15
SNRPA1-209ENST00000560307 TTC13Q8NBP0 860 aa7.89□□□□□ -1.15
SNRPA1-209ENST00000560307 SNIP1Q8TAD8 396 aaKnown RBP7.89□□□□□ -1.15
SNRPA1-209ENST00000560307 EYA1Q99502 592 aa7.89□□□□□ -1.15
SNRPA1-209ENST00000560307 SPSB2Q99619 263 aa7.89□□□□□ -1.15
SNRPA1-209ENST00000560307 MRS2Q9HD23 443 aa7.89□□□□□ -1.15
SNRPA1-209ENST00000560307 PRM3Q9NNZ6 103 aa7.89□□□□□ -1.15
SNRPA1-209ENST00000560307 RPRD2Q5VT52 1461 aaKnown RBP7.88□□□□□ -1.15
SNRPA1-209ENST00000560307 SPATA31E1Q6ZUB1 1445 aa7.88□□□□□ -1.15
SNRPA1-209ENST00000560307 INSRP06213 1382 aa7.88□□□□□ -1.15
SNRPA1-209ENST00000560307 ERBB4Q15303 1308 aa7.88□□□□□ -1.15
SNRPA1-209ENST00000560307 AP1G2O75843 785 aa7.88□□□□□ -1.15
SNRPA1-209ENST00000560307 NPAS3Q8IXF0 933 aa7.88□□□□□ -1.15
SNRPA1-209ENST00000560307 CALR3Q96L12 384 aaKnown RBP7.88□□□□□ -1.15
SNRPA1-209ENST00000560307 KIF14Q15058 1648 aa7.88□□□□□ -1.15
SNRPA1-209ENST00000560307 DENND4BO75064 1496 aaPredicted RBP7.87□□□□□ -1.15
SNRPA1-209ENST00000560307 TEX14Q8IWB6 1497 aa7.87□□□□□ -1.15
SNRPA1-209ENST00000560307 PTPRKQ15262 1439 aa7.87□□□□□ -1.15
SNRPA1-209ENST00000560307 NUTM2BA6NNL0 878 aaPredicted RBP7.87□□□□□ -1.15
SNRPA1-209ENST00000560307 NUTM2EB1AL46 878 aaPredicted RBP7.87□□□□□ -1.15
SNRPA1-209ENST00000560307 H3BM21 787 aa7.87□□□□□ -1.15
SNRPA1-209ENST00000560307 GDF11O95390 407 aa7.87□□□□□ -1.15
SNRPA1-209ENST00000560307 NUTM2DQ5VT03 806 aaPredicted RBP7.87□□□□□ -1.15
SNRPA1-209ENST00000560307 NUTM2AQ8IVF1 878 aaPredicted RBP7.87□□□□□ -1.15
SNRPA1-209ENST00000560307 SULF1Q8IWU6 871 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms