RNA–Protein interactions for RNA: ENST00000560166.1

CLPX-206, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 3

Gene CLPX, Length 563 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-206ENST00000560166 ARHGEF5Q12774 1597 aa9.24□□□□□ -0.93
CLPX-206ENST00000560166 DNMT1P26358 1616 aaKnown RBP9.23□□□□□ -0.93
CLPX-206ENST00000560166 HFM1A2PYH4 1435 aa9.23□□□□□ -0.93
CLPX-206ENST00000560166 DAPK1P53355 1430 aa9.23□□□□□ -0.93
CLPX-206ENST00000560166 PREX1Q8TCU6 1659 aa9.23□□□□□ -0.93
CLPX-206ENST00000560166 CDC42BPAQ5VT25 1732 aa9.23□□□□□ -0.93
CLPX-206ENST00000560166 FOXC1Q12948 553 aa9.23□□□□□ -0.93
CLPX-206ENST00000560166 EFCAB2Q5VUJ9 269 aa9.23□□□□□ -0.93
CLPX-206ENST00000560166 SLC6A16Q9GZN6 736 aa9.23□□□□□ -0.93
CLPX-206ENST00000560166 ABCC5O15440 1437 aa9.22□□□□□ -0.93
CLPX-206ENST00000560166 UHRF1BP1Q6BDS2 1440 aa9.22□□□□□ -0.93
CLPX-206ENST00000560166 ADGRL2O95490 1459 aa9.22□□□□□ -0.93
CLPX-206ENST00000560166 MBD5Q9P267 1494 aa9.22□□□□□ -0.93
CLPX-206ENST00000560166 ARHGAP5Q13017 1502 aa9.22□□□□□ -0.93
CLPX-206ENST00000560166 UBAP1LF5GYI3 381 aa9.22□□□□□ -0.93
CLPX-206ENST00000560166 KMT5BQ4FZB7 885 aa9.22□□□□□ -0.93
CLPX-206ENST00000560166 MYO5CQ9NQX4 1742 aa9.22□□□□□ -0.93
CLPX-206ENST00000560166 ZFYVE16Q7Z3T8 1539 aa9.21□□□□□ -0.93
CLPX-206ENST00000560166 STRCQ7RTU9 1775 aa9.21□□□□□ -0.94
CLPX-206ENST00000560166 PTPRKQ15262 1439 aa9.21□□□□□ -0.94
CLPX-206ENST00000560166 SETD5Q9C0A6 1442 aa9.21□□□□□ -0.94
CLPX-206ENST00000560166 CCDC141Q6ZP82 1450 aa9.21□□□□□ -0.94
CLPX-206ENST00000560166 SAMD9LQ8IVG5 1584 aa9.2□□□□□ -0.94
CLPX-206ENST00000560166 NR1I2O75469 434 aa9.2□□□□□ -0.94
CLPX-206ENST00000560166 ZMYND10O75800 440 aa9.2□□□□□ -0.94
CLPX-206ENST00000560166 ERICH6Q7L0X2 663 aa9.2□□□□□ -0.94
CLPX-206ENST00000560166 ABCC1P33527 1531 aa9.2□□□□□ -0.94
CLPX-206ENST00000560166 CFAP74Q9C0B2 1584 aa9.2□□□□□ -0.94
CLPX-206ENST00000560166 RICTORQ6R327 1708 aa9.19□□□□□ -0.94
CLPX-206ENST00000560166 SIGLEC1Q9BZZ2 1709 aa9.19□□□□□ -0.94
CLPX-206ENST00000560166 DNAJB2P25686 324 aa9.19□□□□□ -0.94
CLPX-206ENST00000560166 RPIAP49247 311 aa9.19□□□□□ -0.94
CLPX-206ENST00000560166 ZNF644Q9H582 1327 aaPredicted RBP9.19□□□□□ -0.94
CLPX-206ENST00000560166 PTPRTO14522 1441 aa9.19□□□□□ -0.94
CLPX-206ENST00000560166 CDC42BPBQ9Y5S2 1711 aa9.19□□□□□ -0.94
CLPX-206ENST00000560166 TERTO14746 1132 aaKnown RBP9.18□□□□□ -0.94
CLPX-206ENST00000560166 MLLT3P42568 568 aaPredicted RBP9.18□□□□□ -0.94
CLPX-206ENST00000560166 NAIPQ13075 1403 aa9.18□□□□□ -0.94
CLPX-206ENST00000560166 IQSEC2Q5JU85 1478 aa9.18□□□□□ -0.94
CLPX-206ENST00000560166 TMEM134Q9H6X4 195 aa9.18□□□□□ -0.94
CLPX-206ENST00000560166 CLSPNQ9HAW4 1339 aa9.18□□□□□ -0.94
CLPX-206ENST00000560166 MAST1Q9Y2H9 1570 aa9.18□□□□□ -0.94
CLPX-206ENST00000560166 LTBP4Q8N2S1 1624 aa9.17□□□□□ -0.94
CLPX-206ENST00000560166 RTEL1-TNFRSF6BF6WH68 1400 aa9.17□□□□□ -0.94
CLPX-206ENST00000560166 NCOA1Q15788 1441 aa9.17□□□□□ -0.94
CLPX-206ENST00000560166 ANKRD30AQ9BXX3 1397 aa9.17□□□□□ -0.94
CLPX-206ENST00000560166 RBM26Q5T8P6 1007 aaKnown RBP9.17□□□□□ -0.94
CLPX-206ENST00000560166 C14orf37Q86TY3 774 aa9.17□□□□□ -0.94
CLPX-206ENST00000560166 CROCC2H7BZ55 1655 aa9.16□□□□□ -0.94
CLPX-206ENST00000560166 SYCP2Q9BX26 1530 aa9.16□□□□□ -0.94
CLPX-206ENST00000560166 C9orf84Q5VXU9 1444 aa9.16□□□□□ -0.94
CLPX-206ENST00000560166 RAB3GAP2Q9H2M9 1393 aa9.16□□□□□ -0.94
CLPX-206ENST00000560166 TSPY4P0CV99 314 aa9.16□□□□□ -0.94
CLPX-206ENST00000560166 TSPY10P0CW01 314 aa9.16□□□□□ -0.94
CLPX-206ENST00000560166 ITGAEP38570 1179 aa9.16□□□□□ -0.94
CLPX-206ENST00000560166 SCUBE3Q8IX30 993 aa9.16□□□□□ -0.94
CLPX-206ENST00000560166 CYP4X1Q8N118 509 aa9.16□□□□□ -0.94
CLPX-206ENST00000560166 ZNF777Q9ULD5 760 aaPredicted RBP9.16□□□□□ -0.94
CLPX-206ENST00000560166 ARHGEF12Q9NZN5 1544 aa9.15□□□□□ -0.94
CLPX-206ENST00000560166 CFHP08603 1231 aa9.15□□□□□ -0.94
CLPX-206ENST00000560166 BARGINQ6ZT62 677 aa9.15□□□□□ -0.94
CLPX-206ENST00000560166 GCC2Q8IWJ2 1684 aa9.15□□□□□ -0.94
CLPX-206ENST00000560166 MED1Q15648 1581 aaPredicted RBP9.15□□□□□ -0.95
CLPX-206ENST00000560166 ZMYM4Q5VZL5 1548 aa9.15□□□□□ -0.95
CLPX-206ENST00000560166 CD2BP2O95400 341 aaKnown RBP9.14□□□□□ -0.95
CLPX-206ENST00000560166 ZEB1P37275 1124 aaPredicted RBP9.14□□□□□ -0.95
CLPX-206ENST00000560166 PIP4K2BP78356 416 aa9.14□□□□□ -0.95
CLPX-206ENST00000560166 ESF1Q9H501 851 aaKnown RBP9.14□□□□□ -0.95
CLPX-206ENST00000560166 PLXNC1O60486 1568 aa9.14□□□□□ -0.95
CLPX-206ENST00000560166 ZNF518AQ6AHZ1 1483 aa9.14□□□□□ -0.95
CLPX-206ENST00000560166 MAGI2Q86UL8 1455 aa9.14□□□□□ -0.95
CLPX-206ENST00000560166 ADGBQ8N7X0 1667 aa9.13□□□□□ -0.95
CLPX-206ENST00000560166 ZNF335Q9H4Z2 1342 aaPredicted RBP9.13□□□□□ -0.95
CLPX-206ENST00000560166 SLC10A3P09131 477 aa9.13□□□□□ -0.95
CLPX-206ENST00000560166 SNRPBP14678 240 aaKnown RBP9.13□□□□□ -0.95
CLPX-206ENST00000560166 HNRNPMP52272 730 aaKnown RBP eCLIP9.13□□□□□ -0.95
CLPX-206ENST00000560166 GPIHBP1Q8IV16 184 aa9.13□□□□□ -0.95
CLPX-206ENST00000560166 SCAPERQ9BY12 1400 aa9.13□□□□□ -0.95
CLPX-206ENST00000560166 RBM46Q8TBY0 533 aaKnown RBP9.12□□□□□ -0.95
CLPX-206ENST00000560166 ATP10AO60312 1499 aa9.12□□□□□ -0.95
CLPX-206ENST00000560166 TRAPPC8Q9Y2L5 1435 aa9.12□□□□□ -0.95
CLPX-206ENST00000560166 DHX57Q6P158 1386 aaKnown RBP9.12□□□□□ -0.95
CLPX-206ENST00000560166 FAM181BA6NEQ2 426 aa9.11□□□□□ -0.95
CLPX-206ENST00000560166 HSPA1LP34931 641 aa9.11□□□□□ -0.95
CLPX-206ENST00000560166 SPSB2Q99619 263 aa9.11□□□□□ -0.95
CLPX-206ENST00000560166 ATP13A2Q9NQ11 1180 aa9.11□□□□□ -0.95
CLPX-206ENST00000560166 ANKRD50Q9ULJ7 1429 aa9.11□□□□□ -0.95
CLPX-206ENST00000560166 KDM5CP41229 1560 aa9.11□□□□□ -0.95
CLPX-206ENST00000560166 KIF15Q9NS87 1388 aa9.11□□□□□ -0.95
CLPX-206ENST00000560166 MLH3Q9UHC1 1453 aa9.1□□□□□ -0.95
CLPX-206ENST00000560166 KRI1Q8N9T8 703 aaKnown RBP9.1□□□□□ -0.95
CLPX-206ENST00000560166 CCER1Q8TC90 406 aaPredicted RBP9.1□□□□□ -0.95
CLPX-206ENST00000560166 TRIM47Q96LD4 638 aa9.1□□□□□ -0.95
CLPX-206ENST00000560166 CHIC2Q9UKJ5 165 aa9.1□□□□□ -0.95
CLPX-206ENST00000560166 ERBINQ96RT1 1412 aa9.1□□□□□ -0.95
CLPX-206ENST00000560166 DUOX2Q9NRD8 1548 aa9.1□□□□□ -0.95
CLPX-206ENST00000560166 SPAG9O60271 1321 aaKnown RBP9.09□□□□□ -0.95
CLPX-206ENST00000560166 INO80Q9ULG1 1556 aaPredicted RBP9.09□□□□□ -0.95
CLPX-206ENST00000560166 RCCD1A6NED2 376 aa9.09□□□□□ -0.95
CLPX-206ENST00000560166 AK7Q96M32 723 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms