RNA–Protein interactions for RNA: ENST00000559588.5

IPO4-209, Transcript of importin 4, humanhuman

TSL 1 (best)

Gene IPO4, Length 3,537 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IPO4-209ENST00000559588 SHANK2Q9UPX8 1470 aa13.12□□□□□ -0.31
IPO4-209ENST00000559588 TSR2Q969E8 191 aaKnown RBP13.12□□□□□ -0.31
IPO4-209ENST00000559588 TSPY26PQ9H489 355 aa13.12□□□□□ -0.31
IPO4-209ENST00000559588 MAGI2Q86UL8 1455 aa13.11□□□□□ -0.31
IPO4-209ENST00000559588 K7ELQ4 463 aaPredicted RBP13.11□□□□□ -0.31
IPO4-209ENST00000559588 TMEM132EQ6IEE7 984 aa13.11□□□□□ -0.31
IPO4-209ENST00000559588 TSPYL1Q9H0U9 437 aa13.11□□□□□ -0.31
IPO4-209ENST00000559588 KCNG1Q9UIX4 513 aa13.11□□□□□ -0.31
IPO4-209ENST00000559588 PREX2Q70Z35 1606 aa13.11□□□□□ -0.31
IPO4-209ENST00000559588 GABPB1Q06547 395 aaPredicted RBP13.11□□□□□ -0.31
IPO4-209ENST00000559588 NCBP3Q53F19 620 aaKnown RBP13.11□□□□□ -0.31
IPO4-209ENST00000559588 SAMD1Q6SPF0 538 aaPredicted RBP13.11□□□□□ -0.31
IPO4-209ENST00000559588 TCP11L2Q8N4U5 519 aa13.11□□□□□ -0.31
IPO4-209ENST00000559588 C16orf45Q96MC5 204 aaPredicted RBP13.11□□□□□ -0.31
IPO4-209ENST00000559588 U2AF1L5P0DN76 240 aaPredicted RBP13.1□□□□□ -0.31
IPO4-209ENST00000559588 U2AF1Q01081 240 aaKnown RBP eCLIP13.1□□□□□ -0.314e-6■□□□□ 8.3
IPO4-209ENST00000559588 CDCA8Q53HL2 280 aa13.1□□□□□ -0.31
IPO4-209ENST00000559588 LNPKQ9C0E8 428 aa13.1□□□□□ -0.31
IPO4-209ENST00000559588 MYO5CQ9NQX4 1742 aa13.1□□□□□ -0.31
IPO4-209ENST00000559588 POLR3GO15318 223 aaPredicted RBP13.1□□□□□ -0.31
IPO4-209ENST00000559588 PRR29P0C7W0 189 aa13.1□□□□□ -0.31
IPO4-209ENST00000559588 KRT222Q8N1A0 295 aa13.1□□□□□ -0.31
IPO4-209ENST00000559588 SLC12A5Q9H2X9 1139 aa13.1□□□□□ -0.31
IPO4-209ENST00000559588 GAS2L2Q8NHY3 880 aa13.1□□□□□ -0.31
IPO4-209ENST00000559588 COL17A1Q9UMD9 1497 aaPredicted RBP13.1□□□□□ -0.31
IPO4-209ENST00000559588 CDC42BPBQ9Y5S2 1711 aa13.1□□□□□ -0.31
IPO4-209ENST00000559588 FAM135AQ9P2D6 1515 aa13.09□□□□□ -0.31
IPO4-209ENST00000559588 NAA30Q147X3 362 aaPredicted RBP13.09□□□□□ -0.31
IPO4-209ENST00000559588 ITPRIPQ8IWB1 547 aa13.09□□□□□ -0.31
IPO4-209ENST00000559588 TRMT2AQ8IZ69 625 aaKnown RBP13.09□□□□□ -0.31
IPO4-209ENST00000559588 CARD14Q9BXL6 1004 aa13.09□□□□□ -0.31
IPO4-209ENST00000559588 VIRMAQ69YN4 1812 aaKnown RBP13.08□□□□□ -0.31
IPO4-209ENST00000559588 CAPN2P17655 700 aa13.08□□□□□ -0.32
IPO4-209ENST00000559588 ZNF445P59923 1031 aa13.08□□□□□ -0.32
IPO4-209ENST00000559588 PIBF1Q8WXW3 757 aa13.08□□□□□ -0.32
IPO4-209ENST00000559588 NUCB2P80303 420 aa13.08□□□□□ -0.32
IPO4-209ENST00000559588 LRSAM1Q6UWE0 723 aa13.08□□□□□ -0.32
IPO4-209ENST00000559588 DRC1Q96MC2 740 aa13.08□□□□□ -0.32
IPO4-209ENST00000559588 ADCY5O95622 1261 aa13.07□□□□□ -0.32
IPO4-209ENST00000559588 CCDC112Q8NEF3 446 aa13.07□□□□□ -0.32
IPO4-209ENST00000559588 SYAP1Q96A49 352 aaPredicted RBP13.07□□□□□ -0.32
IPO4-209ENST00000559588 SLC52A1Q9NWF4 448 aa13.07□□□□□ -0.32
IPO4-209ENST00000559588 NINLQ9Y2I6 1382 aa13.07□□□□□ -0.32
IPO4-209ENST00000559588 DUOX2Q9NRD8 1548 aa13.07□□□□□ -0.32
IPO4-209ENST00000559588 TERF2Q15554 542 aa13.07□□□□□ -0.32
IPO4-209ENST00000559588 RASSF4Q9H2L5 321 aa13.07□□□□□ -0.32
IPO4-209ENST00000559588 ZNF518AQ6AHZ1 1483 aa13.07□□□□□ -0.32
IPO4-209ENST00000559588 SMC5Q8IY18 1101 aa13.06□□□□□ -0.32
IPO4-209ENST00000559588 NOL10Q9BSC4 688 aaKnown RBP13.06□□□□□ -0.32
IPO4-209ENST00000559588 PLA2R1Q13018 1463 aa13.06□□□□□ -0.32
IPO4-209ENST00000559588 HNRNPH2P55795 449 aaKnown RBP13.06□□□□□ -0.32
IPO4-209ENST00000559588 GOLGA6L1Q8N7Z2 621 aa13.06□□□□□ -0.32
IPO4-209ENST00000559588 SMC4Q9NTJ3 1288 aa13.06□□□□□ -0.32
IPO4-209ENST00000559588 MTHFSP49914 203 aa13.06□□□□□ -0.32
IPO4-209ENST00000559588 RARSP54136 660 aaKnown RBP13.06□□□□□ -0.32
IPO4-209ENST00000559588 PDLIM2Q96JY6 352 aa13.06□□□□□ -0.32
IPO4-209ENST00000559588 ABCC1P33527 1531 aa13.05□□□□□ -0.32
IPO4-209ENST00000559588 SLFN14P0C7P3 912 aa13.05□□□□□ -0.32
IPO4-209ENST00000559588 ARHGEF5Q12774 1597 aa13.05□□□□□ -0.32
IPO4-209ENST00000559588 GTF3C6Q969F1 213 aa13.05□□□□□ -0.32
IPO4-209ENST00000559588 GDPD2Q9HCC8 539 aa13.05□□□□□ -0.32
IPO4-209ENST00000559588 ST7Q9NRC1 585 aa13.05□□□□□ -0.32
IPO4-209ENST00000559588 SKIDA1Q1XH10 827 aa13.05□□□□□ -0.32
IPO4-209ENST00000559588 RNF216Q9NWF9 866 aaPredicted RBP13.05□□□□□ -0.32
IPO4-209ENST00000559588 TMEM63CQ9P1W3 806 aa13.05□□□□□ -0.32
IPO4-209ENST00000559588 YEATS2Q9ULM3 1422 aa13.05□□□□□ -0.32
IPO4-209ENST00000559588 CD2BP2O95400 341 aaKnown RBP13.04□□□□□ -0.32
IPO4-209ENST00000559588 ZNF692Q9BU19 519 aaPredicted RBP13.04□□□□□ -0.32
IPO4-209ENST00000559588 KIF16BQ96L93 1317 aa13.04□□□□□ -0.32
IPO4-209ENST00000559588 ELL2O00472 640 aaPredicted RBP13.04□□□□□ -0.32
IPO4-209ENST00000559588 PKP1Q13835 747 aa13.04□□□□□ -0.32
IPO4-209ENST00000559588 TEX35Q5T0J7 233 aa13.04□□□□□ -0.32
IPO4-209ENST00000559588 ATP7AQ04656 1500 aa13.04□□□□□ -0.32
IPO4-209ENST00000559588 CEBPAP49715 358 aaPredicted RBP13.04□□□□□ -0.32
IPO4-209ENST00000559588 GYS2P54840 703 aa13.04□□□□□ -0.32
IPO4-209ENST00000559588 ADGRF5Q8IZF2 1346 aa13.03□□□□□ -0.32
IPO4-209ENST00000559588 KDM5DQ9BY66 1539 aa13.03□□□□□ -0.32
IPO4-209ENST00000559588 FEZ2Q9UHY8 353 aaPredicted RBP13.03□□□□□ -0.32
IPO4-209ENST00000559588 IDI1Q13907 227 aa13.03□□□□□ -0.32
IPO4-209ENST00000559588 TPD52L1Q16890 204 aaPredicted RBP13.03□□□□□ -0.32
IPO4-209ENST00000559588 NEK11Q8NG66 645 aa13.03□□□□□ -0.32
IPO4-209ENST00000559588 BCCIPQ9P287 314 aaKnown RBP eCLIP13.03□□□□□ -0.32
IPO4-209ENST00000559588 ZMYM3Q14202 1370 aa13.02□□□□□ -0.32
IPO4-209ENST00000559588 RAD51AP2Q09MP3 1159 aa13.02□□□□□ -0.33
IPO4-209ENST00000559588 DEF6Q9H4E7 631 aa13.02□□□□□ -0.33
IPO4-209ENST00000559588 LMBRD1Q9NUN5 540 aa13.02□□□□□ -0.33
IPO4-209ENST00000559588 ADGBQ8N7X0 1667 aa13.01□□□□□ -0.33
IPO4-209ENST00000559588 HCLS1P14317 486 aaPredicted RBP13.01□□□□□ -0.33
IPO4-209ENST00000559588 MYCBPQ99417 103 aaPredicted RBP13.01□□□□□ -0.33
IPO4-209ENST00000559588 C1orf115Q9H7X2 142 aa13.01□□□□□ -0.33
IPO4-209ENST00000559588 CHMP3Q9Y3E7 222 aa13.01□□□□□ -0.33
IPO4-209ENST00000559588 SART3Q15020 963 aaKnown RBP13.01□□□□□ -0.33
IPO4-209ENST00000559588 RTEL1-TNFRSF6BF6WH68 1400 aa13.01□□□□□ -0.33
IPO4-209ENST00000559588 POGZQ7Z3K3 1410 aa13.01□□□□□ -0.33
IPO4-209ENST00000559588 CHRM1P11229 460 aaPredicted RBP13.01□□□□□ -0.33
IPO4-209ENST00000559588 EXOSC9Q06265 439 aaKnown RBP13.01□□□□□ -0.33
IPO4-209ENST00000559588 RIMBP3CA6NJZ7 1639 aa13.01□□□□□ -0.33
IPO4-209ENST00000559588 RIMBP3BA6NNM3 1639 aa13.01□□□□□ -0.33
IPO4-209ENST00000559588 RIMBP3Q9UFD9 1639 aa13.01□□□□□ -0.33
IPO4-209ENST00000559588 APBB1O00213 710 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms