RNA–Protein interactions for RNA: ENST00000559588.5

IPO4-209, Transcript of importin 4, humanhuman

TSL 1 (best)

Gene IPO4, Length 3,537 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IPO4-209ENST00000559588 SHANK2Q9UPX8 1470 aa13.12□□□□□ -0.31
IPO4-209ENST00000559588 TSR2Q969E8 191 aaKnown RBP13.12□□□□□ -0.31
IPO4-209ENST00000559588 TSPY26PQ9H489 355 aa13.12□□□□□ -0.31
IPO4-209ENST00000559588 MAGI2Q86UL8 1455 aa13.11□□□□□ -0.31
IPO4-209ENST00000559588 K7ELQ4 463 aaPredicted RBP13.11□□□□□ -0.31
IPO4-209ENST00000559588 TMEM132EQ6IEE7 984 aa13.11□□□□□ -0.31
IPO4-209ENST00000559588 TSPYL1Q9H0U9 437 aa13.11□□□□□ -0.31
IPO4-209ENST00000559588 KCNG1Q9UIX4 513 aa13.11□□□□□ -0.31
IPO4-209ENST00000559588 PREX2Q70Z35 1606 aa13.11□□□□□ -0.31
IPO4-209ENST00000559588 GABPB1Q06547 395 aaPredicted RBP13.11□□□□□ -0.31
IPO4-209ENST00000559588 NCBP3Q53F19 620 aaKnown RBP13.11□□□□□ -0.31
IPO4-209ENST00000559588 SAMD1Q6SPF0 538 aaPredicted RBP13.11□□□□□ -0.31
IPO4-209ENST00000559588 TCP11L2Q8N4U5 519 aa13.11□□□□□ -0.31
IPO4-209ENST00000559588 C16orf45Q96MC5 204 aaPredicted RBP13.11□□□□□ -0.31
IPO4-209ENST00000559588 U2AF1L5P0DN76 240 aaPredicted RBP13.1□□□□□ -0.31
IPO4-209ENST00000559588 U2AF1Q01081 240 aaKnown RBP eCLIP13.1□□□□□ -0.314e-6■□□□□ 8.3
IPO4-209ENST00000559588 CDCA8Q53HL2 280 aa13.1□□□□□ -0.31
IPO4-209ENST00000559588 LNPKQ9C0E8 428 aa13.1□□□□□ -0.31
IPO4-209ENST00000559588 MYO5CQ9NQX4 1742 aa13.1□□□□□ -0.31
IPO4-209ENST00000559588 POLR3GO15318 223 aaPredicted RBP13.1□□□□□ -0.31
IPO4-209ENST00000559588 PRR29P0C7W0 189 aa13.1□□□□□ -0.31
IPO4-209ENST00000559588 KRT222Q8N1A0 295 aa13.1□□□□□ -0.31
IPO4-209ENST00000559588 SLC12A5Q9H2X9 1139 aa13.1□□□□□ -0.31
IPO4-209ENST00000559588 GAS2L2Q8NHY3 880 aa13.1□□□□□ -0.31
IPO4-209ENST00000559588 COL17A1Q9UMD9 1497 aaPredicted RBP13.1□□□□□ -0.31
IPO4-209ENST00000559588 CDC42BPBQ9Y5S2 1711 aa13.1□□□□□ -0.31
IPO4-209ENST00000559588 FAM135AQ9P2D6 1515 aa13.09□□□□□ -0.31
IPO4-209ENST00000559588 NAA30Q147X3 362 aaPredicted RBP13.09□□□□□ -0.31
IPO4-209ENST00000559588 ITPRIPQ8IWB1 547 aa13.09□□□□□ -0.31
IPO4-209ENST00000559588 TRMT2AQ8IZ69 625 aaKnown RBP13.09□□□□□ -0.31
IPO4-209ENST00000559588 CARD14Q9BXL6 1004 aa13.09□□□□□ -0.31
IPO4-209ENST00000559588 VIRMAQ69YN4 1812 aaKnown RBP13.08□□□□□ -0.31
IPO4-209ENST00000559588 CAPN2P17655 700 aa13.08□□□□□ -0.32
IPO4-209ENST00000559588 ZNF445P59923 1031 aa13.08□□□□□ -0.32
IPO4-209ENST00000559588 PIBF1Q8WXW3 757 aa13.08□□□□□ -0.32
IPO4-209ENST00000559588 NUCB2P80303 420 aa13.08□□□□□ -0.32
IPO4-209ENST00000559588 LRSAM1Q6UWE0 723 aa13.08□□□□□ -0.32
IPO4-209ENST00000559588 DRC1Q96MC2 740 aa13.08□□□□□ -0.32
IPO4-209ENST00000559588 ADCY5O95622 1261 aa13.07□□□□□ -0.32
IPO4-209ENST00000559588 CCDC112Q8NEF3 446 aa13.07□□□□□ -0.32
IPO4-209ENST00000559588 SYAP1Q96A49 352 aaPredicted RBP13.07□□□□□ -0.32
IPO4-209ENST00000559588 SLC52A1Q9NWF4 448 aa13.07□□□□□ -0.32
IPO4-209ENST00000559588 NINLQ9Y2I6 1382 aa13.07□□□□□ -0.32
IPO4-209ENST00000559588 DUOX2Q9NRD8 1548 aa13.07□□□□□ -0.32
IPO4-209ENST00000559588 TERF2Q15554 542 aa13.07□□□□□ -0.32
IPO4-209ENST00000559588 RASSF4Q9H2L5 321 aa13.07□□□□□ -0.32
IPO4-209ENST00000559588 ZNF518AQ6AHZ1 1483 aa13.07□□□□□ -0.32
IPO4-209ENST00000559588 SMC5Q8IY18 1101 aa13.06□□□□□ -0.32
IPO4-209ENST00000559588 NOL10Q9BSC4 688 aaKnown RBP13.06□□□□□ -0.32
IPO4-209ENST00000559588 PLA2R1Q13018 1463 aa13.06□□□□□ -0.32
IPO4-209ENST00000559588 HNRNPH2P55795 449 aaKnown RBP13.06□□□□□ -0.32
IPO4-209ENST00000559588 GOLGA6L1Q8N7Z2 621 aa13.06□□□□□ -0.32
IPO4-209ENST00000559588 SMC4Q9NTJ3 1288 aa13.06□□□□□ -0.32
IPO4-209ENST00000559588 MTHFSP49914 203 aa13.06□□□□□ -0.32
IPO4-209ENST00000559588 RARSP54136 660 aaKnown RBP13.06□□□□□ -0.32
IPO4-209ENST00000559588 PDLIM2Q96JY6 352 aa13.06□□□□□ -0.32
IPO4-209ENST00000559588 ABCC1P33527 1531 aa13.05□□□□□ -0.32
IPO4-209ENST00000559588 SLFN14P0C7P3 912 aa13.05□□□□□ -0.32
IPO4-209ENST00000559588 ARHGEF5Q12774 1597 aa13.05□□□□□ -0.32
IPO4-209ENST00000559588 GTF3C6Q969F1 213 aa13.05□□□□□ -0.32
IPO4-209ENST00000559588 GDPD2Q9HCC8 539 aa13.05□□□□□ -0.32
IPO4-209ENST00000559588 ST7Q9NRC1 585 aa13.05□□□□□ -0.32
IPO4-209ENST00000559588 SKIDA1Q1XH10 827 aa13.05□□□□□ -0.32
IPO4-209ENST00000559588 RNF216Q9NWF9 866 aaPredicted RBP13.05□□□□□ -0.32
IPO4-209ENST00000559588 TMEM63CQ9P1W3 806 aa13.05□□□□□ -0.32
IPO4-209ENST00000559588 YEATS2Q9ULM3 1422 aa13.05□□□□□ -0.32
IPO4-209ENST00000559588 CD2BP2O95400 341 aaKnown RBP13.04□□□□□ -0.32
IPO4-209ENST00000559588 ZNF692Q9BU19 519 aaPredicted RBP13.04□□□□□ -0.32
IPO4-209ENST00000559588 KIF16BQ96L93 1317 aa13.04□□□□□ -0.32
IPO4-209ENST00000559588 ELL2O00472 640 aaPredicted RBP13.04□□□□□ -0.32
IPO4-209ENST00000559588 PKP1Q13835 747 aa13.04□□□□□ -0.32
IPO4-209ENST00000559588 TEX35Q5T0J7 233 aa13.04□□□□□ -0.32
IPO4-209ENST00000559588 ATP7AQ04656 1500 aa13.04□□□□□ -0.32
IPO4-209ENST00000559588 CEBPAP49715 358 aaPredicted RBP13.04□□□□□ -0.32
IPO4-209ENST00000559588 GYS2P54840 703 aa13.04□□□□□ -0.32
IPO4-209ENST00000559588 ADGRF5Q8IZF2 1346 aa13.03□□□□□ -0.32
IPO4-209ENST00000559588 KDM5DQ9BY66 1539 aa13.03□□□□□ -0.32
IPO4-209ENST00000559588 FEZ2Q9UHY8 353 aaPredicted RBP13.03□□□□□ -0.32
IPO4-209ENST00000559588 IDI1Q13907 227 aa13.03□□□□□ -0.32
IPO4-209ENST00000559588 TPD52L1Q16890 204 aaPredicted RBP13.03□□□□□ -0.32
IPO4-209ENST00000559588 NEK11Q8NG66 645 aa13.03□□□□□ -0.32
IPO4-209ENST00000559588 BCCIPQ9P287 314 aaKnown RBP eCLIP13.03□□□□□ -0.32
IPO4-209ENST00000559588 ZMYM3Q14202 1370 aa13.02□□□□□ -0.32
IPO4-209ENST00000559588 RAD51AP2Q09MP3 1159 aa13.02□□□□□ -0.33
IPO4-209ENST00000559588 DEF6Q9H4E7 631 aa13.02□□□□□ -0.33
IPO4-209ENST00000559588 LMBRD1Q9NUN5 540 aa13.02□□□□□ -0.33
IPO4-209ENST00000559588 ADGBQ8N7X0 1667 aa13.01□□□□□ -0.33
IPO4-209ENST00000559588 HCLS1P14317 486 aaPredicted RBP13.01□□□□□ -0.33
IPO4-209ENST00000559588 MYCBPQ99417 103 aaPredicted RBP13.01□□□□□ -0.33
IPO4-209ENST00000559588 C1orf115Q9H7X2 142 aa13.01□□□□□ -0.33
IPO4-209ENST00000559588 CHMP3Q9Y3E7 222 aa13.01□□□□□ -0.33
IPO4-209ENST00000559588 SART3Q15020 963 aaKnown RBP13.01□□□□□ -0.33
IPO4-209ENST00000559588 RTEL1-TNFRSF6BF6WH68 1400 aa13.01□□□□□ -0.33
IPO4-209ENST00000559588 POGZQ7Z3K3 1410 aa13.01□□□□□ -0.33
IPO4-209ENST00000559588 CHRM1P11229 460 aaPredicted RBP13.01□□□□□ -0.33
IPO4-209ENST00000559588 EXOSC9Q06265 439 aaKnown RBP13.01□□□□□ -0.33
IPO4-209ENST00000559588 RIMBP3CA6NJZ7 1639 aa13.01□□□□□ -0.33
IPO4-209ENST00000559588 RIMBP3BA6NNM3 1639 aa13.01□□□□□ -0.33
IPO4-209ENST00000559588 RIMBP3Q9UFD9 1639 aa13.01□□□□□ -0.33
IPO4-209ENST00000559588 APBB1O00213 710 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms