RNA–Protein interactions for RNA: ENST00000559077.1

RNF111-204, Transcript of ring finger protein 111, humanhuman

TSL 5

Gene RNF111, Length 472 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111-204ENST00000559077 PHLDB1Q86UU1 1377 aa12.64□□□□□ -0.39
RNF111-204ENST00000559077 PLEKHH2Q8IVE3 1493 aa12.64□□□□□ -0.39
RNF111-204ENST00000559077 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.63□□□□□ -0.39
RNF111-204ENST00000559077 REPIN1Q9BWE0 567 aaKnown RBP12.63□□□□□ -0.39
RNF111-204ENST00000559077 GPATCH8Q9UKJ3 1502 aaKnown RBP12.62□□□□□ -0.39
RNF111-204ENST00000559077 PREX2Q70Z35 1606 aa12.62□□□□□ -0.39
RNF111-204ENST00000559077 MYO5CQ9NQX4 1742 aa12.62□□□□□ -0.39
RNF111-204ENST00000559077 CFAP74Q9C0B2 1584 aa12.62□□□□□ -0.39
RNF111-204ENST00000559077 TCOF1Q13428 1488 aaKnown RBP12.62□□□□□ -0.39
RNF111-204ENST00000559077 LCE2CQ5TA81 110 aa12.62□□□□□ -0.39
RNF111-204ENST00000559077 Q3C1V9 767 aa12.61□□□□□ -0.39
RNF111-204ENST00000559077 PLCH2O75038 1416 aa12.61□□□□□ -0.39
RNF111-204ENST00000559077 CFDP1Q9UEE9 299 aaPredicted RBP12.6□□□□□ -0.39
RNF111-204ENST00000559077 TTC37Q6PGP7 1564 aa12.6□□□□□ -0.39
RNF111-204ENST00000559077 CDC42BPAQ5VT25 1732 aa12.59□□□□□ -0.39
RNF111-204ENST00000559077 PTPN23Q9H3S7 1636 aa12.59□□□□□ -0.39
RNF111-204ENST00000559077 EFCAB2Q5VUJ9 269 aa12.58□□□□□ -0.4
RNF111-204ENST00000559077 PPARGC1BQ86YN6 1023 aaKnown RBP12.58□□□□□ -0.4
RNF111-204ENST00000559077 KIAA1107Q9UPP5 1409 aa12.58□□□□□ -0.4
RNF111-204ENST00000559077 ARHGAP5Q13017 1502 aa12.57□□□□□ -0.4
RNF111-204ENST00000559077 DIP2BQ9P265 1576 aa12.57□□□□□ -0.4
RNF111-204ENST00000559077 CD109Q6YHK3 1445 aa12.56□□□□□ -0.4
RNF111-204ENST00000559077 ALDH1A1P00352 501 aa12.56□□□□□ -0.4
RNF111-204ENST00000559077 RC3H1Q5TC82 1133 aaKnown RBP12.56□□□□□ -0.4
RNF111-204ENST00000559077 TEX14Q8IWB6 1497 aa12.56□□□□□ -0.4
RNF111-204ENST00000559077 NEO1Q92859 1461 aa12.56□□□□□ -0.4
RNF111-204ENST00000559077 ACIN1Q9UKV3 1341 aaKnown RBP12.56□□□□□ -0.4
RNF111-204ENST00000559077 MAP3K4Q9Y6R4 1608 aa12.55□□□□□ -0.4
RNF111-204ENST00000559077 CDC42BPBQ9Y5S2 1711 aa12.54□□□□□ -0.4
RNF111-204ENST00000559077 CAMSAP2Q08AD1 1489 aa12.54□□□□□ -0.4
RNF111-204ENST00000559077 MMP16P51512 607 aa12.54□□□□□ -0.4
RNF111-204ENST00000559077 MAP2K5Q13163 448 aa12.54□□□□□ -0.4
RNF111-204ENST00000559077 USB1Q9BQ65 265 aaKnown RBP12.54□□□□□ -0.4
RNF111-204ENST00000559077 ARHGEF5Q12774 1597 aa12.54□□□□□ -0.4
RNF111-204ENST00000559077 FANCAO15360 1455 aa12.53□□□□□ -0.4
RNF111-204ENST00000559077 NXF1Q9UBU9 619 aaKnown RBP12.53□□□□□ -0.4
RNF111-204ENST00000559077 SHANK2Q9UPX8 1470 aa12.53□□□□□ -0.4
RNF111-204ENST00000559077 GMPRP36959 345 aa12.52□□□□□ -0.41
RNF111-204ENST00000559077 FAM50AQ14320 339 aaKnown RBP12.52□□□□□ -0.41
RNF111-204ENST00000559077 ZSCAN1Q8NBB4 408 aa12.52□□□□□ -0.41
RNF111-204ENST00000559077 AKNAQ7Z591 1439 aa12.52□□□□□ -0.41
RNF111-204ENST00000559077 DNMT1P26358 1616 aaKnown RBP12.51□□□□□ -0.41
RNF111-204ENST00000559077 TULP1O00294 542 aaPredicted RBP12.51□□□□□ -0.41
RNF111-204ENST00000559077 VEGFBP49765 207 aa12.51□□□□□ -0.41
RNF111-204ENST00000559077 FAM69CQ0P6D2 419 aa12.51□□□□□ -0.41
RNF111-204ENST00000559077 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.51□□□□□ -0.41
RNF111-204ENST00000559077 IRF6O14896 467 aa12.5□□□□□ -0.41
RNF111-204ENST00000559077 BMP1P13497 986 aa12.5□□□□□ -0.41
RNF111-204ENST00000559077 IRF7Q92985 503 aa12.5□□□□□ -0.41
RNF111-204ENST00000559077 CCDC141Q6ZP82 1450 aa12.5□□□□□ -0.41
RNF111-204ENST00000559077 ABCC1P33527 1531 aa12.5□□□□□ -0.41
RNF111-204ENST00000559077 SAMD9LQ8IVG5 1584 aa12.5□□□□□ -0.41
RNF111-204ENST00000559077 ROCK1Q13464 1354 aa12.49□□□□□ -0.41
RNF111-204ENST00000559077 DXOO77932 396 aaKnown RBP12.49□□□□□ -0.41
RNF111-204ENST00000559077 DAPK1P53355 1430 aa12.48□□□□□ -0.41
RNF111-204ENST00000559077 WNT7BP56706 349 aa12.48□□□□□ -0.41
RNF111-204ENST00000559077 SKOR1P84550 965 aa12.48□□□□□ -0.41
RNF111-204ENST00000559077 WASF2Q9Y6W5 498 aa12.48□□□□□ -0.41
RNF111-204ENST00000559077 ADGRL1O94910 1474 aa12.47□□□□□ -0.41
RNF111-204ENST00000559077 TSPY4P0CV99 314 aa12.47□□□□□ -0.41
RNF111-204ENST00000559077 TSPY10P0CW01 314 aa12.47□□□□□ -0.41
RNF111-204ENST00000559077 CCDC102AQ96A19 550 aa12.47□□□□□ -0.41
RNF111-204ENST00000559077 ZNF518AQ6AHZ1 1483 aa12.46□□□□□ -0.41
RNF111-204ENST00000559077 MBD5Q9P267 1494 aa12.46□□□□□ -0.41
RNF111-204ENST00000559077 KIF13AQ9H1H9 1805 aa12.46□□□□□ -0.41
RNF111-204ENST00000559077 CROCC2H7BZ55 1655 aa12.46□□□□□ -0.41
RNF111-204ENST00000559077 ZNF777Q9ULD5 760 aaPredicted RBP12.46□□□□□ -0.41
RNF111-204ENST00000559077 MAST1Q9Y2H9 1570 aa12.46□□□□□ -0.42
RNF111-204ENST00000559077 SYCP2Q9BX26 1530 aa12.46□□□□□ -0.42
RNF111-204ENST00000559077 ADGRL2O95490 1459 aa12.46□□□□□ -0.42
RNF111-204ENST00000559077 RTEL1-TNFRSF6BF6WH68 1400 aa12.45□□□□□ -0.42
RNF111-204ENST00000559077 CAPN5O15484 640 aaPredicted RBP12.45□□□□□ -0.42
RNF111-204ENST00000559077 KDM4AO75164 1064 aa12.45□□□□□ -0.42
RNF111-204ENST00000559077 EHBP1Q8NDI1 1231 aa12.45□□□□□ -0.42
RNF111-204ENST00000559077 PCGF6Q9BYE7 350 aa12.45□□□□□ -0.42
RNF111-204ENST00000559077 ABCC5O15440 1437 aa12.45□□□□□ -0.42
RNF111-204ENST00000559077 MINK1Q8N4C8 1332 aaPredicted RBP12.44□□□□□ -0.42
RNF111-204ENST00000559077 HRCP23327 699 aa12.44□□□□□ -0.42
RNF111-204ENST00000559077 MDM2Q00987 491 aaPredicted RBP12.44□□□□□ -0.42
RNF111-204ENST00000559077 ADGBQ8N7X0 1667 aa12.44□□□□□ -0.42
RNF111-204ENST00000559077 HFM1A2PYH4 1435 aa12.44□□□□□ -0.42
RNF111-204ENST00000559077 ANKRD30AQ9BXX3 1397 aa12.43□□□□□ -0.42
RNF111-204ENST00000559077 DENND4BO75064 1496 aaPredicted RBP12.43□□□□□ -0.42
RNF111-204ENST00000559077 CD46P15529 392 aa12.43□□□□□ -0.42
RNF111-204ENST00000559077 C9orf84Q5VXU9 1444 aa12.43□□□□□ -0.42
RNF111-204ENST00000559077 POGZQ7Z3K3 1410 aa12.43□□□□□ -0.42
RNF111-204ENST00000559077 SCAPERQ9BY12 1400 aa12.43□□□□□ -0.42
RNF111-204ENST00000559077 HLA-CQ95604 372 aa12.42□□□□□ -0.42
RNF111-204ENST00000559077 PLXNC1O60486 1568 aa12.42□□□□□ -0.42
RNF111-204ENST00000559077 ZNF644Q9H582 1327 aaPredicted RBP12.41□□□□□ -0.42
RNF111-204ENST00000559077 KDM5CP41229 1560 aa12.41□□□□□ -0.42
RNF111-204ENST00000559077 MAGI2Q86UL8 1455 aa12.4□□□□□ -0.42
RNF111-204ENST00000559077 TRIM46Q7Z4K8 759 aa12.4□□□□□ -0.42
RNF111-204ENST00000559077 PPRC1Q5VV67 1664 aaKnown RBP12.4□□□□□ -0.42
RNF111-204ENST00000559077 NCOA1Q15788 1441 aa12.39□□□□□ -0.43
RNF111-204ENST00000559077 MLH3Q9UHC1 1453 aa12.39□□□□□ -0.43
RNF111-204ENST00000559077 GCC2Q8IWJ2 1684 aa12.38□□□□□ -0.43
RNF111-204ENST00000559077 SPAG9O60271 1321 aaKnown RBP12.38□□□□□ -0.43
RNF111-204ENST00000559077 SETD5Q9C0A6 1442 aa12.38□□□□□ -0.43
RNF111-204ENST00000559077 ZMYM4Q5VZL5 1548 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms