RNA–Protein interactions for RNA: ENST00000558941.5

PCAT29-202, prostate cancer associated transcript 29, humanhuman

TSL 4 BASIC

Gene PCAT29, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-202ENST00000558941 USP19O94966 1318 aa11.92□□□□□ -0.5
PCAT29-202ENST00000558941 PNPLA7Q6ZV29 1317 aa11.92□□□□□ -0.5
PCAT29-202ENST00000558941 POLD1P28340 1107 aa11.92□□□□□ -0.5
PCAT29-202ENST00000558941 ABHD8Q96I13 439 aa11.92□□□□□ -0.5
PCAT29-202ENST00000558941 KIF1BO60333 1816 aa11.91□□□□□ -0.5
PCAT29-202ENST00000558941 FOXN1O15353 648 aa11.91□□□□□ -0.5
PCAT29-202ENST00000558941 MARCH10Q8NA82 808 aaPredicted RBP11.91□□□□□ -0.5
PCAT29-202ENST00000558941 BTAF1O14981 1849 aa11.9□□□□□ -0.5
PCAT29-202ENST00000558941 FSTL1Q12841 308 aa11.9□□□□□ -0.5
PCAT29-202ENST00000558941 PMFBP1Q8TBY8 1022 aa11.9□□□□□ -0.5
PCAT29-202ENST00000558941 SLC16A10Q8TF71 515 aa11.9□□□□□ -0.5
PCAT29-202ENST00000558941 AKT1S1Q96B36 256 aa11.9□□□□□ -0.5
PCAT29-202ENST00000558941 LRRC4BQ9NT99 713 aa11.9□□□□□ -0.5
PCAT29-202ENST00000558941 PDE4DIPQ5VU43 2346 aa11.89□□□□□ -0.51
PCAT29-202ENST00000558941 THRAP3Q9Y2W1 955 aaKnown RBP11.89□□□□□ -0.51
PCAT29-202ENST00000558941 QRICH2Q9H0J4 1663 aa11.88□□□□□ -0.51
PCAT29-202ENST00000558941 PRDM10Q9NQV6 1147 aa11.88□□□□□ -0.51
PCAT29-202ENST00000558941 COL5A2P05997 1499 aaPredicted RBP11.88□□□□□ -0.51
PCAT29-202ENST00000558941 ZC3H6P61129 1189 aaKnown RBP11.87□□□□□ -0.51
PCAT29-202ENST00000558941 PKD1L3Q7Z443 1732 aa11.86□□□□□ -0.51
PCAT29-202ENST00000558941 ACIN1Q9UKV3 1341 aaKnown RBP11.86□□□□□ -0.51
PCAT29-202ENST00000558941 KIAA1551Q9HCM1 1747 aa11.84□□□□□ -0.51
PCAT29-202ENST00000558941 EVA1CP58658 441 aa11.84□□□□□ -0.51
PCAT29-202ENST00000558941 STK26Q9P289 416 aa11.84□□□□□ -0.51
PCAT29-202ENST00000558941 CRB1P82279 1406 aa11.84□□□□□ -0.51
PCAT29-202ENST00000558941 C10orf71Q711Q0 1435 aa11.84□□□□□ -0.51
PCAT29-202ENST00000558941 TNRC6CQ9HCJ0 1690 aaKnown RBP11.84□□□□□ -0.51
PCAT29-202ENST00000558941 ABCC11Q96J66 1382 aa11.83□□□□□ -0.52
PCAT29-202ENST00000558941 DDB1Q16531 1140 aa11.83□□□□□ -0.52
PCAT29-202ENST00000558941 PXDNLA1KZ92 1463 aa11.83□□□□□ -0.52
PCAT29-202ENST00000558941 TRPM1Q7Z4N2 1603 aa11.82□□□□□ -0.52
PCAT29-202ENST00000558941 PIK3C2AO00443 1686 aa11.82□□□□□ -0.52
PCAT29-202ENST00000558941 ANKARQ7Z5J8 1434 aa11.82□□□□□ -0.52
PCAT29-202ENST00000558941 KCPQ6ZWJ8 1503 aa11.81□□□□□ -0.52
PCAT29-202ENST00000558941 CD2APQ9Y5K6 639 aa11.81□□□□□ -0.52
PCAT29-202ENST00000558941 IGSF1Q8N6C5 1336 aa11.81□□□□□ -0.52
PCAT29-202ENST00000558941 VGFO15240 615 aaPredicted RBP11.8□□□□□ -0.52
PCAT29-202ENST00000558941 CPDO75976 1380 aa11.79□□□□□ -0.52
PCAT29-202ENST00000558941 VIRMAQ69YN4 1812 aaKnown RBP11.79□□□□□ -0.52
PCAT29-202ENST00000558941 PRR36Q9H6K5 1346 aa11.79□□□□□ -0.52
PCAT29-202ENST00000558941 BRD4O60885 1362 aaPredicted RBP11.79□□□□□ -0.52
PCAT29-202ENST00000558941 CCDC85CA6NKD9 419 aa11.78□□□□□ -0.52
PCAT29-202ENST00000558941 GPRASP1Q5JY77 1395 aa11.78□□□□□ -0.52
PCAT29-202ENST00000558941 COL18A1P39060 1754 aa11.77□□□□□ -0.52
PCAT29-202ENST00000558941 MSL1Q68DK7 614 aa11.77□□□□□ -0.53
PCAT29-202ENST00000558941 ROCK1Q13464 1354 aa11.77□□□□□ -0.53
PCAT29-202ENST00000558941 USP54Q70EL1 1684 aa11.76□□□□□ -0.53
PCAT29-202ENST00000558941 LBX1P52954 281 aa11.76□□□□□ -0.53
PCAT29-202ENST00000558941 TMEM132EQ6IEE7 984 aa11.76□□□□□ -0.53
PCAT29-202ENST00000558941 C16orf71Q8IYS4 520 aaPredicted RBP11.76□□□□□ -0.53
PCAT29-202ENST00000558941 LY75O60449 1722 aa11.76□□□□□ -0.53
PCAT29-202ENST00000558941 YTHDC2Q9H6S0 1430 aaKnown RBP11.76□□□□□ -0.53
PCAT29-202ENST00000558941 NUP155O75694 1391 aa11.75□□□□□ -0.53
PCAT29-202ENST00000558941 PAK3O75914 559 aaPredicted RBP11.74□□□□□ -0.53
PCAT29-202ENST00000558941 CTCFP49711 727 aaPredicted RBP11.74□□□□□ -0.53
PCAT29-202ENST00000558941 KCNQ4P56696 695 aa11.74□□□□□ -0.53
PCAT29-202ENST00000558941 FAM50AQ14320 339 aaKnown RBP11.74□□□□□ -0.53
PCAT29-202ENST00000558941 NUTM2GQ5VZR2 741 aa11.74□□□□□ -0.53
PCAT29-202ENST00000558941 SMC1BQ8NDV3 1235 aa11.74□□□□□ -0.53
PCAT29-202ENST00000558941 ACSBG1Q96GR2 724 aa11.74□□□□□ -0.53
PCAT29-202ENST00000558941 ADGRF5Q8IZF2 1346 aa11.74□□□□□ -0.53
PCAT29-202ENST00000558941 N4BP2Q86UW6 1770 aaPredicted RBP11.74□□□□□ -0.53
PCAT29-202ENST00000558941 BRCA1P38398 1863 aaKnown RBP11.74□□□□□ -0.53
PCAT29-202ENST00000558941 USP6P35125 1406 aa11.73□□□□□ -0.53
PCAT29-202ENST00000558941 COL23A1Q86Y22 540 aaPredicted RBP11.73□□□□□ -0.53
PCAT29-202ENST00000558941 KIF13BQ9NQT8 1826 aa11.72□□□□□ -0.53
PCAT29-202ENST00000558941 RGPD5Q99666 1765 aa11.72□□□□□ -0.53
PCAT29-202ENST00000558941 ABCC6O95255 1503 aa11.72□□□□□ -0.53
PCAT29-202ENST00000558941 RRAGCQ9HB90 399 aa11.72□□□□□ -0.53
PCAT29-202ENST00000558941 TFCP2L1Q9NZI6 479 aa11.72□□□□□ -0.53
PCAT29-202ENST00000558941 MKRN1Q9UHC7 482 aaKnown RBP11.72□□□□□ -0.53
PCAT29-202ENST00000558941 HSPA8P11142 646 aaKnown RBP11.71□□□□□ -0.53
PCAT29-202ENST00000558941 TOGARAM1Q9Y4F4 1720 aa11.71□□□□□ -0.54
PCAT29-202ENST00000558941 ANKRD30BQ9BXX2 1392 aa11.7□□□□□ -0.54
PCAT29-202ENST00000558941 HIRIP3Q9BW71 556 aaPredicted RBP11.7□□□□□ -0.54
PCAT29-202ENST00000558941 A0A0C4DFX4 3053 aa11.69□□□□□ -0.54
PCAT29-202ENST00000558941 RPGRIP1LQ68CZ1 1315 aa11.69□□□□□ -0.54
PCAT29-202ENST00000558941 SIRT1Q96EB6 747 aa11.69□□□□□ -0.54
PCAT29-202ENST00000558941 SBF1O95248 1867 aa11.69□□□□□ -0.54
PCAT29-202ENST00000558941 SZT2Q5T011 3432 aa11.69□□□□□ -0.54
PCAT29-202ENST00000558941 PLEKHG2Q9H7P9 1386 aa11.68□□□□□ -0.54
PCAT29-202ENST00000558941 PRPF38BQ5VTL8 546 aaKnown RBP11.68□□□□□ -0.54
PCAT29-202ENST00000558941 WBP1LQ9NX94 342 aa11.68□□□□□ -0.54
PCAT29-202ENST00000558941 ITSN1Q15811 1721 aa11.68□□□□□ -0.54
PCAT29-202ENST00000558941 SAFB2Q14151 953 aaKnown RBP eCLIP11.67□□□□□ -0.54
PCAT29-202ENST00000558941 SLC27A3Q5K4L6 730 aa11.67□□□□□ -0.54
PCAT29-202ENST00000558941 ARFGEF1Q9Y6D6 1849 aa11.67□□□□□ -0.54
PCAT29-202ENST00000558941 CNTNAP1P78357 1384 aa11.67□□□□□ -0.54
PCAT29-202ENST00000558941 C9orf131Q5VYM1 1079 aa11.66□□□□□ -0.54
PCAT29-202ENST00000558941 PIK3C2GO75747 1445 aa11.66□□□□□ -0.54
PCAT29-202ENST00000558941 C5P01031 1676 aa11.65□□□□□ -0.55
PCAT29-202ENST00000558941 TOM1L2Q6ZVM7 507 aa11.64□□□□□ -0.55
PCAT29-202ENST00000558941 PRAM1Q96QH2 718 aa11.64□□□□□ -0.55
PCAT29-202ENST00000558941 WDR17Q8IZU2 1322 aa11.63□□□□□ -0.55
PCAT29-202ENST00000558941 KDM2BQ8NHM5 1336 aa11.63□□□□□ -0.55
PCAT29-202ENST00000558941 TAF1LQ8IZX4 1826 aa11.63□□□□□ -0.55
PCAT29-202ENST00000558941 KAT6BQ8WYB5 2073 aa11.63□□□□□ -0.55
PCAT29-202ENST00000558941 NGDNQ8NEJ9 315 aaKnown RBP11.63□□□□□ -0.55
PCAT29-202ENST00000558941 CDCA7Q9BWT1 371 aaPredicted RBP11.63□□□□□ -0.55
PCAT29-202ENST00000558941 CREBZFQ9NS37 354 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms