RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 SOBPA7XYQ1 873 aa8.56□□□□□ -1.04
CASC4-206ENST00000558847 UPP2O95045 317 aa8.56□□□□□ -1.04
CASC4-206ENST00000558847 C4orf48Q5BLP8 95 aa8.56□□□□□ -1.04
CASC4-206ENST00000558847 NBPF14Q5TI25 921 aa8.56□□□□□ -1.04
CASC4-206ENST00000558847 ITPKCQ96DU7 683 aa8.56□□□□□ -1.04
CASC4-206ENST00000558847 GJD4Q96KN9 370 aaPredicted RBP8.56□□□□□ -1.04
CASC4-206ENST00000558847 FAM181BA6NEQ2 426 aa8.55□□□□□ -1.04
CASC4-206ENST00000558847 EPS8L1Q8TE68 723 aa8.55□□□□□ -1.04
CASC4-206ENST00000558847 SNRKQ9NRH2 765 aa8.55□□□□□ -1.04
CASC4-206ENST00000558847 H3BM21 787 aa8.54□□□□□ -1.04
CASC4-206ENST00000558847 MAN1A2O60476 641 aa8.54□□□□□ -1.04
CASC4-206ENST00000558847 GPR37L1O60883 481 aa8.54□□□□□ -1.04
CASC4-206ENST00000558847 NR3C2P08235 984 aa8.54□□□□□ -1.04
CASC4-206ENST00000558847 BMP2P12643 396 aa8.54□□□□□ -1.04
CASC4-206ENST00000558847 MCM6Q14566 821 aa8.54□□□□□ -1.04
CASC4-206ENST00000558847 NR6A1Q15406 480 aa8.54□□□□□ -1.04
CASC4-206ENST00000558847 VASH1Q7L8A9 365 aaPredicted RBP8.54□□□□□ -1.04
CASC4-206ENST00000558847 KLF16Q9BXK1 252 aaPredicted RBP8.54□□□□□ -1.04
CASC4-206ENST00000558847 CARD14Q9BXL6 1004 aa8.54□□□□□ -1.04
CASC4-206ENST00000558847 FSHRP23945 695 aa8.53□□□□□ -1.04
CASC4-206ENST00000558847 GRM5P41594 1212 aa8.53□□□□□ -1.04
CASC4-206ENST00000558847 ZSCAN1Q8NBB4 408 aa8.52□□□□□ -1.05
CASC4-206ENST00000558847 ERBB4Q15303 1308 aa8.51□□□□□ -1.05
CASC4-206ENST00000558847 LINC00528Q8N1L1 170 aa8.5□□□□□ -1.05
CASC4-206ENST00000558847 FKBPLQ9UIM3 349 aa8.5□□□□□ -1.05
CASC4-206ENST00000558847 SH3BP5LQ7L8J4 393 aa8.49□□□□□ -1.05
CASC4-206ENST00000558847 SH3RF1Q7Z6J0 888 aa8.49□□□□□ -1.05
CASC4-206ENST00000558847 HOMEZQ8IX15 550 aa8.49□□□□□ -1.05
CASC4-206ENST00000558847 C1QTNF2Q9BXJ5 285 aa8.49□□□□□ -1.05
CASC4-206ENST00000558847 ZC3H4Q9UPT8 1303 aaKnown RBP8.49□□□□□ -1.05
CASC4-206ENST00000558847 SUPT5HO00267 1087 aaKnown RBP8.48□□□□□ -1.05
CASC4-206ENST00000558847 CCDC116Q8IYX3 515 aa8.48□□□□□ -1.05
CASC4-206ENST00000558847 MEIOBQ8N635 442 aa8.48□□□□□ -1.05
CASC4-206ENST00000558847 GPKOWQ92917 476 aaPredicted RBP eCLIP8.48□□□□□ -1.05
CASC4-206ENST00000558847 MAP4K5Q9Y4K4 846 aa8.48□□□□□ -1.05
CASC4-206ENST00000558847 EMILIN1Q9Y6C2 1016 aa8.48□□□□□ -1.05
CASC4-206ENST00000558847 TRMT44Q8IYL2 757 aaKnown RBP8.47□□□□□ -1.05
CASC4-206ENST00000558847 ARHGAP9Q9BRR9 750 aa8.47□□□□□ -1.05
CASC4-206ENST00000558847 OCSTAMPQ9BR26 566 aa8.46□□□□□ -1.06
CASC4-206ENST00000558847 TSEN34Q9BSV6 310 aaKnown RBP8.46□□□□□ -1.06
CASC4-206ENST00000558847 NDUFB9Q9Y6M9 179 aa8.46□□□□□ -1.06
CASC4-206ENST00000558847 ERFEQ4G0M1 354 aa8.45□□□□□ -1.06
CASC4-206ENST00000558847 ZBTB33Q86T24 672 aa8.45□□□□□ -1.06
CASC4-206ENST00000558847 PGPEP1Q9NXJ5 209 aa8.45□□□□□ -1.06
CASC4-206ENST00000558847 APBB1O00213 710 aa8.44□□□□□ -1.06
CASC4-206ENST00000558847 UBTFP17480 764 aaKnown RBP8.44□□□□□ -1.06
CASC4-206ENST00000558847 PDXDC2PQ6P474 469 aa8.44□□□□□ -1.06
CASC4-206ENST00000558847 SLC10A4Q96EP9 437 aa8.44□□□□□ -1.06
CASC4-206ENST00000558847 TBC1D2BQ9UPU7 963 aa8.44□□□□□ -1.06
CASC4-206ENST00000558847 A6NJR5 290 aa8.43□□□□□ -1.06
CASC4-206ENST00000558847 PNMA1Q8ND90 353 aa8.43□□□□□ -1.06
CASC4-206ENST00000558847 DNMT3LQ9UJW3 386 aa8.43□□□□□ -1.06
CASC4-206ENST00000558847 PPFIA3O75145 1194 aa8.42□□□□□ -1.06
CASC4-206ENST00000558847 PPP1R26Q5T8A7 1209 aaPredicted RBP8.42□□□□□ -1.06
CASC4-206ENST00000558847 GPSM3Q9Y4H4 160 aa8.42□□□□□ -1.06
CASC4-206ENST00000558847 SOS2Q07890 1332 aaPredicted RBP8.42□□□□□ -1.06
CASC4-206ENST00000558847 FIGNL2A6NMB9 653 aa8.41□□□□□ -1.06
CASC4-206ENST00000558847 TTLL8A6PVC2 850 aa8.41□□□□□ -1.06
CASC4-206ENST00000558847 RAD21O60216 631 aa8.41□□□□□ -1.06
CASC4-206ENST00000558847 CBLBQ13191 982 aa8.41□□□□□ -1.06
CASC4-206ENST00000558847 IRF5Q13568 498 aa8.41□□□□□ -1.06
CASC4-206ENST00000558847 KCTD15Q96SI1 283 aaPredicted RBP8.41□□□□□ -1.06
CASC4-206ENST00000558847 VSIG8P0DPA2 414 aa8.4□□□□□ -1.06
CASC4-206ENST00000558847 LORP23490 312 aaPredicted RBP8.4□□□□□ -1.06
CASC4-206ENST00000558847 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.4□□□□□ -1.06
CASC4-206ENST00000558847 POM121Q96HA1 1249 aa8.4□□□□□ -1.06
CASC4-206ENST00000558847 GDPD2Q9HCC8 539 aa8.4□□□□□ -1.06
CASC4-206ENST00000558847 CDV3Q9UKY7 258 aaKnown RBP8.4□□□□□ -1.06
CASC4-206ENST00000558847 COG6Q9Y2V7 657 aa8.4□□□□□ -1.06
CASC4-206ENST00000558847 FBXO45P0C2W1 286 aa8.39□□□□□ -1.07
CASC4-206ENST00000558847 PTK2Q05397 1052 aa8.39□□□□□ -1.07
CASC4-206ENST00000558847 DHX9Q08211 1270 aaKnown RBP8.39□□□□□ -1.07
CASC4-206ENST00000558847 PRM3Q9NNZ6 103 aa8.38□□□□□ -1.07
CASC4-206ENST00000558847 ZBBXA8MT70 800 aa8.37□□□□□ -1.07
CASC4-206ENST00000558847 RAB15P59190 212 aa8.37□□□□□ -1.07
CASC4-206ENST00000558847 ADAM32Q8TC27 787 aa8.37□□□□□ -1.07
CASC4-206ENST00000558847 RELBQ01201 579 aa8.36□□□□□ -1.07
CASC4-206ENST00000558847 PTSQ03393 145 aa8.36□□□□□ -1.07
CASC4-206ENST00000558847 ABL2P42684 1182 aa8.35□□□□□ -1.07
CASC4-206ENST00000558847 NR1H3Q13133 447 aa8.35□□□□□ -1.07
CASC4-206ENST00000558847 INTS6LQ5JSJ4 861 aaKnown RBP8.35□□□□□ -1.07
CASC4-206ENST00000558847 Q6ZVU0 165 aa8.35□□□□□ -1.07
CASC4-206ENST00000558847 WWC1Q8IX03 1113 aa8.35□□□□□ -1.07
CASC4-206ENST00000558847 AGBL1Q96MI9 1066 aa8.35□□□□□ -1.07
CASC4-206ENST00000558847 SPINT1O43278 529 aa8.34□□□□□ -1.07
CASC4-206ENST00000558847 TRAK2O60296 914 aa8.34□□□□□ -1.07
CASC4-206ENST00000558847 NBPF20Q3BBV1 942 aa8.34□□□□□ -1.07
CASC4-206ENST00000558847 DZIP3Q86Y13 1208 aaKnown RBP8.34□□□□□ -1.07
CASC4-206ENST00000558847 POLMQ9NP87 494 aaPredicted RBP8.34□□□□□ -1.07
CASC4-206ENST00000558847 PROSER2Q86WR7 435 aaPredicted RBP8.33□□□□□ -1.08
CASC4-206ENST00000558847 CNTNAP3BQ96NU0 1288 aa8.33□□□□□ -1.08
CASC4-206ENST00000558847 CNTNAP3Q9BZ76 1288 aa8.33□□□□□ -1.08
CASC4-206ENST00000558847 CCDC155Q8N6L0 562 aa8.32□□□□□ -1.08
CASC4-206ENST00000558847 CLUAP1Q96AJ1 413 aa8.32□□□□□ -1.08
CASC4-206ENST00000558847 INSM2Q96T92 566 aaPredicted RBP8.32□□□□□ -1.08
CASC4-206ENST00000558847 ZNF395Q9H8N7 513 aaPredicted RBP8.32□□□□□ -1.08
CASC4-206ENST00000558847 CTSOP43234 321 aaPredicted RBP8.31□□□□□ -1.08
CASC4-206ENST00000558847 TMPRSS4Q9NRS4 437 aa8.31□□□□□ -1.08
CASC4-206ENST00000558847 CDC14CA4D256 554 aa8.3□□□□□ -1.08
CASC4-206ENST00000558847 VAC14Q08AM6 782 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms