RNA–Protein interactions for RNA: ENST00000558787.1

MARK3-215, Transcript of microtubule affinity regulating kinase 3, human

TSL 2

Gene MARK3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-215	ENST00000558787	TMEM132E	Q6IEE7	984 aa		10.4	□□□□□ -0.74
MARK3-215	ENST00000558787	ORAI2	Q96SN7	254 aa		10.4	□□□□□ -0.74
MARK3-215	ENST00000558787	LARP6	Q9BRS8	491 aa	Known RBP	10.4	□□□□□ -0.74
MARK3-215	ENST00000558787	DCC	P43146	1447 aa		10.4	□□□□□ -0.75
MARK3-215	ENST00000558787	CCDC144A	A2RUR9	1427 aa		10.39	□□□□□ -0.75
MARK3-215	ENST00000558787	NALCN	Q8IZF0	1738 aa		10.38	□□□□□ -0.75
MARK3-215	ENST00000558787	WAPL	Q7Z5K2	1190 aa		10.38	□□□□□ -0.75
MARK3-215	ENST00000558787	SPATA31E1	Q6ZUB1	1445 aa		10.38	□□□□□ -0.75
MARK3-215	ENST00000558787	SETD1A	O15047	1707 aa	Known RBP	10.38	□□□□□ -0.75
MARK3-215	ENST00000558787	C1orf167	Q5SNV9	1468 aa		10.37	□□□□□ -0.75
MARK3-215	ENST00000558787	PPL	O60437	1756 aa		10.37	□□□□□ -0.75
MARK3-215	ENST00000558787	LRRC59	Q96AG4	307 aa	Known RBP	10.37	□□□□□ -0.75
MARK3-215	ENST00000558787	DDX27	Q96GQ7	796 aa	Known RBP	10.37	□□□□□ -0.75
MARK3-215	ENST00000558787	SETD5	Q9C0A6	1442 aa		10.37	□□□□□ -0.75
MARK3-215	ENST00000558787	PTCH1	Q13635	1447 aa		10.36	□□□□□ -0.75
MARK3-215	ENST00000558787	NUTM2F	A1L443	756 aa		10.36	□□□□□ -0.75
MARK3-215	ENST00000558787	SHPRH	Q149N8	1683 aa		10.35	□□□□□ -0.75
MARK3-215	ENST00000558787	ZNF772	Q68DY9	489 aa	Predicted RBP	10.35	□□□□□ -0.75
MARK3-215	ENST00000558787	C8orf37	Q96NL8	207 aa		10.35	□□□□□ -0.75
MARK3-215	ENST00000558787	AFF2	P51816	1311 aa		10.34	□□□□□ -0.75
MARK3-215	ENST00000558787	NHSL1	Q5SYE7	1610 aa		10.34	□□□□□ -0.75
MARK3-215	ENST00000558787	ADAMTS2	O95450	1211 aa		10.34	□□□□□ -0.75
MARK3-215	ENST00000558787	XPC	Q01831	940 aa	Predicted RBP	10.34	□□□□□ -0.75
MARK3-215	ENST00000558787	ESCO1	Q5FWF5	840 aa		10.34	□□□□□ -0.75
MARK3-215	ENST00000558787	ADGRD1	Q6QNK2	874 aa		10.34	□□□□□ -0.75
MARK3-215	ENST00000558787	PNPLA6	Q8IY17	1366 aa		10.34	□□□□□ -0.75
MARK3-215	ENST00000558787	ANKRD30B	Q9BXX2	1392 aa		10.34	□□□□□ -0.75
MARK3-215	ENST00000558787	RAB3GAP2	Q9H2M9	1393 aa		10.34	□□□□□ -0.75
MARK3-215	ENST00000558787	PLEKHH1	Q9ULM0	1364 aa		10.34	□□□□□ -0.75
MARK3-215	ENST00000558787	PSEN2	P49810	448 aa		10.33	□□□□□ -0.76
MARK3-215	ENST00000558787	CFAP70	Q5T0N1	1121 aa		10.33	□□□□□ -0.76
MARK3-215	ENST00000558787	LRPPRC	P42704	1394 aa	Known RBP	10.32	□□□□□ -0.76
MARK3-215	ENST00000558787	TK2	O00142	265 aa		10.32	□□□□□ -0.76
MARK3-215	ENST00000558787	FOXO3	O43524	673 aa		10.32	□□□□□ -0.76
MARK3-215	ENST00000558787	RXRB	P28702	533 aa		10.32	□□□□□ -0.76
MARK3-215	ENST00000558787	MFSD10	Q14728	455 aa		10.32	□□□□□ -0.76
MARK3-215	ENST00000558787	ZNF454	Q8N9F8	522 aa		10.32	□□□□□ -0.76
MARK3-215	ENST00000558787	PRAG1	Q86YV5	1406 aa		10.32	□□□□□ -0.76
MARK3-215	ENST00000558787	SOS2	Q07890	1332 aa	Predicted RBP	10.32	□□□□□ -0.76
MARK3-215	ENST00000558787	ABCC11	Q96J66	1382 aa		10.31	□□□□□ -0.76
MARK3-215	ENST00000558787	MAP3K9	P80192	1104 aa		10.31	□□□□□ -0.76
MARK3-215	ENST00000558787	SAFB2	Q14151	953 aa	Known RBP eCLIP	10.31	□□□□□ -0.76
MARK3-215	ENST00000558787	BBX	Q8WY36	941 aa	Predicted RBP	10.31	□□□□□ -0.76
MARK3-215	ENST00000558787	NGLY1	Q96IV0	654 aa		10.31	□□□□□ -0.76
MARK3-215	ENST00000558787	C14orf93	Q9H972	538 aa	Known RBP	10.31	□□□□□ -0.76
MARK3-215	ENST00000558787	QTRT2	Q9H974	415 aa	Known RBP	10.31	□□□□□ -0.76
MARK3-215	ENST00000558787	PIK3C2G	O75747	1445 aa		10.31	□□□□□ -0.76
MARK3-215	ENST00000558787	IFT172	Q9UG01	1749 aa		10.3	□□□□□ -0.76
MARK3-215	ENST00000558787	EVI5	O60447	810 aa		10.3	□□□□□ -0.76
MARK3-215	ENST00000558787	DMRTA1	Q5VZB9	504 aa		10.3	□□□□□ -0.76
MARK3-215	ENST00000558787	STAC3	Q96MF2	364 aa		10.3	□□□□□ -0.76
MARK3-215	ENST00000558787	KDM2A	Q9Y2K7	1162 aa		10.3	□□□□□ -0.76
MARK3-215	ENST00000558787	YTHDC2	Q9H6S0	1430 aa	Known RBP	10.3	□□□□□ -0.76
MARK3-215	ENST00000558787	KCNK17	Q96T54	332 aa		10.29	□□□□□ -0.76
MARK3-215	ENST00000558787	ANO8	Q9HCE9	1232 aa	Predicted RBP	10.29	□□□□□ -0.76
MARK3-215	ENST00000558787	TECPR2	O15040	1411 aa		10.29	□□□□□ -0.76
MARK3-215	ENST00000558787	PRAM1	Q96QH2	718 aa		10.28	□□□□□ -0.76
MARK3-215	ENST00000558787	CDC42BPG	Q6DT37	1551 aa		10.27	□□□□□ -0.76
MARK3-215	ENST00000558787	LAMC1	P11047	1609 aa		10.27	□□□□□ -0.77
MARK3-215	ENST00000558787	FOSB	P53539	338 aa		10.27	□□□□□ -0.77
MARK3-215	ENST00000558787	NPHP3	Q7Z494	1330 aa		10.27	□□□□□ -0.77
MARK3-215	ENST00000558787	ACIN1	Q9UKV3	1341 aa	Known RBP	10.27	□□□□□ -0.77
MARK3-215	ENST00000558787	DHX57	Q6P158	1386 aa	Known RBP	10.26	□□□□□ -0.77
MARK3-215	ENST00000558787	PXDN	Q92626	1479 aa		10.26	□□□□□ -0.77
MARK3-215	ENST00000558787	NRXN1	Q9ULB1	1477 aa		10.26	□□□□□ -0.77
MARK3-215	ENST00000558787	RBM6	P78332	1123 aa	Known RBP	10.26	□□□□□ -0.77
MARK3-215	ENST00000558787	DCAF11	Q8TEB1	546 aa		10.26	□□□□□ -0.77
MARK3-215	ENST00000558787	BCL2L12	Q9HB09	334 aa		10.26	□□□□□ -0.77
MARK3-215	ENST00000558787	USP21	Q9UK80	565 aa		10.26	□□□□□ -0.77
MARK3-215	ENST00000558787	KRT28	Q7Z3Y7	464 aa		10.25	□□□□□ -0.77
MARK3-215	ENST00000558787	SIRT1	Q96EB6	747 aa		10.25	□□□□□ -0.77
MARK3-215	ENST00000558787	HIRIP3	Q9BW71	556 aa	Predicted RBP	10.25	□□□□□ -0.77
MARK3-215	ENST00000558787	POGK	Q9P215	609 aa		10.25	□□□□□ -0.77
MARK3-215	ENST00000558787	TRAK1	Q9UPV9	953 aa		10.25	□□□□□ -0.77
MARK3-215	ENST00000558787	HR	O43593	1189 aa		10.24	□□□□□ -0.77
MARK3-215	ENST00000558787	PTPRE	P23469	700 aa		10.24	□□□□□ -0.77
MARK3-215	ENST00000558787	FNBP4	Q8N3X1	1017 aa	Predicted RBP	10.24	□□□□□ -0.77
MARK3-215	ENST00000558787	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	10.24	□□□□□ -0.77
MARK3-215	ENST00000558787	RGS12	O14924	1447 aa		10.24	□□□□□ -0.77
MARK3-215	ENST00000558787	MYOM2	P54296	1465 aa		10.23	□□□□□ -0.77
MARK3-215	ENST00000558787	PMFBP1	Q8TBY8	1022 aa		10.23	□□□□□ -0.77
MARK3-215	ENST00000558787	CABLES1	Q8TDN4	633 aa		10.23	□□□□□ -0.77
MARK3-215	ENST00000558787	EMILIN3	Q9NT22	766 aa		10.23	□□□□□ -0.77
MARK3-215	ENST00000558787	HCST	Q9UBK5	93 aa		10.23	□□□□□ -0.77
MARK3-215	ENST00000558787	KNDC1	Q76NI1	1749 aa		10.23	□□□□□ -0.77
MARK3-215	ENST00000558787	SPATA31A3	Q5VYP0	1347 aa		10.23	□□□□□ -0.77
MARK3-215	ENST00000558787	MINK1	Q8N4C8	1332 aa	Predicted RBP	10.23	□□□□□ -0.77
MARK3-215	ENST00000558787	FMN2	Q9NZ56	1722 aa		10.22	□□□□□ -0.77
MARK3-215	ENST00000558787	LMOD2	Q6P5Q4	547 aa		10.22	□□□□□ -0.77
MARK3-215	ENST00000558787	SPRYD3	Q8NCJ5	442 aa		10.22	□□□□□ -0.77
MARK3-215	ENST00000558787	ZDHHC16	Q969W1	377 aa		10.22	□□□□□ -0.77
MARK3-215	ENST00000558787	TRPC5	Q9UL62	973 aa	Predicted RBP	10.22	□□□□□ -0.77
MARK3-215	ENST00000558787	CDK12	Q9NYV4	1490 aa	Predicted RBP	10.22	□□□□□ -0.77
MARK3-215	ENST00000558787	RGPD8	O14715	1765 aa	Predicted RBP	10.21	□□□□□ -0.77
MARK3-215	ENST00000558787	HRC	P23327	699 aa		10.21	□□□□□ -0.77
MARK3-215	ENST00000558787	PSME1	Q06323	249 aa		10.21	□□□□□ -0.77
MARK3-215	ENST00000558787	COL22A1	Q8NFW1	1626 aa	Predicted RBP	10.21	□□□□□ -0.78
MARK3-215	ENST00000558787	ADGRB1	O14514	1584 aa		10.2	□□□□□ -0.78
MARK3-215	ENST00000558787	BCL9L	Q86UU0	1499 aa		10.2	□□□□□ -0.78
MARK3-215	ENST00000558787	SLC4A5	Q9BY07	1137 aa		10.2	□□□□□ -0.78

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