RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 SLC12A5Q9H2X9 1139 aa21.97■■□□□ 1.11
TPM1-211ENST00000558314 WDR17Q8IZU2 1322 aa21.96■■□□□ 1.11
TPM1-211ENST00000558314 DISP2A7MBM2 1401 aa21.96■■□□□ 1.11
TPM1-211ENST00000558314 SBNO2Q9Y2G9 1366 aa21.94■■□□□ 1.1
TPM1-211ENST00000558314 COL18A1P39060 1754 aa21.92■■□□□ 1.1
TPM1-211ENST00000558314 PARP4Q9UKK3 1724 aaKnown RBP21.92■■□□□ 1.1
TPM1-211ENST00000558314 OVOS2A0A0G2JMS6 1433 aa21.91■■□□□ 1.1
TPM1-211ENST00000558314 OVOS2A0A0J9YW53 1432 aa21.91■■□□□ 1.1
TPM1-211ENST00000558314 OVOS2Q6IE36 1432 aa21.91■■□□□ 1.1
TPM1-211ENST00000558314 TERF2IPQ9NYB0 399 aa21.91■■□□□ 1.1
TPM1-211ENST00000558314 ST20-MTHFSA0A0A6YYL1 179 aa21.9■■□□□ 1.1
TPM1-211ENST00000558314 NBPF14Q5TI25 921 aa21.9■■□□□ 1.1
TPM1-211ENST00000558314 RGPD5Q99666 1765 aa21.89■■□□□ 1.1
TPM1-211ENST00000558314 MON2Q7Z3U7 1717 aa21.89■■□□□ 1.1
TPM1-211ENST00000558314 CARD10Q9BWT7 1032 aa21.89■■□□□ 1.09
TPM1-211ENST00000558314 NLRP2Q9NX02 1062 aa21.89■■□□□ 1.09
TPM1-211ENST00000558314 NFAT5O94916 1531 aa21.89■■□□□ 1.09
TPM1-211ENST00000558314 CD163L1Q9NR16 1453 aa21.89■■□□□ 1.09
TPM1-211ENST00000558314 PARD3Q8TEW0 1356 aa21.88■■□□□ 1.09
TPM1-211ENST00000558314 LRRC37A3O60309 1634 aa21.88■■□□□ 1.09
TPM1-211ENST00000558314 A0A1W2PP64 1363 aa21.87■■□□□ 1.09
TPM1-211ENST00000558314 C11orf95C9JLR9 678 aaPredicted RBP21.87■■□□□ 1.09
TPM1-211ENST00000558314 EXOC5O00471 708 aa21.87■■□□□ 1.09
TPM1-211ENST00000558314 MARCH10Q8NA82 808 aaPredicted RBP21.87■■□□□ 1.09
TPM1-211ENST00000558314 CDCA7Q9BWT1 371 aaPredicted RBP21.87■■□□□ 1.09
TPM1-211ENST00000558314 PTF1AQ7RTS3 328 aa21.86■■□□□ 1.09
TPM1-211ENST00000558314 LRP5O75197 1615 aa21.86■■□□□ 1.09
TPM1-211ENST00000558314 EDC4Q6P2E9 1401 aaKnown RBP21.85■■□□□ 1.09
TPM1-211ENST00000558314 USP31Q70CQ4 1352 aa21.85■■□□□ 1.09
TPM1-211ENST00000558314 LTV1Q96GA3 475 aaPredicted RBP21.84■■□□□ 1.09
TPM1-211ENST00000558314 ANKRD24Q8TF21 1146 aa21.83■■□□□ 1.09
TPM1-211ENST00000558314 TESK2Q96S53 571 aa21.83■■□□□ 1.09
TPM1-211ENST00000558314 CCDC7Q96M83 1385 aa21.83■■□□□ 1.08
TPM1-211ENST00000558314 BCL11BQ9C0K0 894 aaPredicted RBP21.82■■□□□ 1.08
TPM1-211ENST00000558314 WNK3Q9BYP7 1800 aa21.81■■□□□ 1.08
TPM1-211ENST00000558314 ERBB3P21860 1342 aa21.8■■□□□ 1.08
TPM1-211ENST00000558314 NUP188Q5SRE5 1749 aa21.8■■□□□ 1.08
TPM1-211ENST00000558314 PEAK1Q9H792 1746 aa21.8■■□□□ 1.08
TPM1-211ENST00000558314 RREB1Q92766 1687 aa21.8■■□□□ 1.08
TPM1-211ENST00000558314 ACSBG1Q96GR2 724 aa21.79■■□□□ 1.08
TPM1-211ENST00000558314 COG3Q96JB2 828 aa21.79■■□□□ 1.08
TPM1-211ENST00000558314 PUS7Q96PZ0 661 aaKnown RBP21.79■■□□□ 1.08
TPM1-211ENST00000558314 PCGF6Q9BYE7 350 aa21.79■■□□□ 1.08
TPM1-211ENST00000558314 LTN1O94822 1766 aa21.78■■□□□ 1.08
TPM1-211ENST00000558314 IL2RBP14784 551 aa21.77■■□□□ 1.08
TPM1-211ENST00000558314 FBLN1P23142 703 aa21.77■■□□□ 1.08
TPM1-211ENST00000558314 TMF1P82094 1093 aa21.77■■□□□ 1.08
TPM1-211ENST00000558314 USP47Q96K76 1375 aa21.76■■□□□ 1.07
TPM1-211ENST00000558314 ABCC6O95255 1503 aa21.76■■□□□ 1.07
TPM1-211ENST00000558314 PLSCR1O15162 318 aa21.76■■□□□ 1.07
TPM1-211ENST00000558314 PPP1R1BQ9UD71 204 aaPredicted RBP21.76■■□□□ 1.07
TPM1-211ENST00000558314 SBF2Q86WG5 1849 aa21.76■■□□□ 1.07
TPM1-211ENST00000558314 NINLQ9Y2I6 1382 aa21.75■■□□□ 1.07
TPM1-211ENST00000558314 TNS2Q63HR2 1409 aa21.75■■□□□ 1.07
TPM1-211ENST00000558314 KCNQ2O43526 872 aa21.75■■□□□ 1.07
TPM1-211ENST00000558314 SLC24A1O60721 1099 aa21.75■■□□□ 1.07
TPM1-211ENST00000558314 AMPHP49418 695 aa21.75■■□□□ 1.07
TPM1-211ENST00000558314 ANO8Q9HCE9 1232 aaPredicted RBP21.74■■□□□ 1.07
TPM1-211ENST00000558314 USP54Q70EL1 1684 aa21.73■■□□□ 1.07
TPM1-211ENST00000558314 IP6K1Q92551 441 aa21.73■■□□□ 1.07
TPM1-211ENST00000558314 DDX54Q8TDD1 881 aaKnown RBP21.72■■□□□ 1.07
TPM1-211ENST00000558314 GGNBP2Q9H3C7 697 aa21.72■■□□□ 1.07
TPM1-211ENST00000558314 SPON1Q9HCB6 807 aa21.72■■□□□ 1.07
TPM1-211ENST00000558314 TXNRD1Q16881 649 aa21.71■■□□□ 1.07
TPM1-211ENST00000558314 MAP3K19Q56UN5 1328 aa21.71■■□□□ 1.07
TPM1-211ENST00000558314 ANKRD36BQ8N2N9 1353 aa21.71■■□□□ 1.07
TPM1-211ENST00000558314 PROM2Q8N271 834 aa21.7■■□□□ 1.06
TPM1-211ENST00000558314 STK32BQ9NY57 414 aa21.7■■□□□ 1.06
TPM1-211ENST00000558314 RRS1Q15050 365 aaKnown RBP21.69■■□□□ 1.06
TPM1-211ENST00000558314 BCL9O00512 1426 aa21.69■■□□□ 1.06
TPM1-211ENST00000558314 HOXC9P31274 260 aa21.68■■□□□ 1.06
TPM1-211ENST00000558314 POLR3GLQ9BT43 218 aa21.68■■□□□ 1.06
TPM1-211ENST00000558314 ZBTB7AO95365 584 aa21.67■■□□□ 1.06
TPM1-211ENST00000558314 PDGFDQ9GZP0 370 aaPredicted RBP21.67■■□□□ 1.06
TPM1-211ENST00000558314 CDCA8Q53HL2 280 aa21.66■■□□□ 1.06
TPM1-211ENST00000558314 KAT6BQ8WYB5 2073 aa21.66■■□□□ 1.06
TPM1-211ENST00000558314 FYB1O15117 783 aa21.65■■□□□ 1.06
TPM1-211ENST00000558314 SYTL4Q96C24 671 aaPredicted RBP21.65■■□□□ 1.06
TPM1-211ENST00000558314 RGPD3A6NKT7 1758 aaPredicted RBP21.65■■□□□ 1.06
TPM1-211ENST00000558314 RGPD4Q7Z3J3 1758 aa21.65■■□□□ 1.06
TPM1-211ENST00000558314 USHBP1Q8N6Y0 703 aa21.64■■□□□ 1.05
TPM1-211ENST00000558314 ATF5Q9Y2D1 282 aaPredicted RBP21.64■■□□□ 1.05
TPM1-211ENST00000558314 SLC15A2Q16348 729 aa21.62■■□□□ 1.05
TPM1-211ENST00000558314 NHSQ6T4R5 1651 aa21.61■■□□□ 1.05
TPM1-211ENST00000558314 SMG6Q86US8 1419 aaKnown RBP21.58■■□□□ 1.05
TPM1-211ENST00000558314 DCAF8L1A6NGE4 600 aa21.58■■□□□ 1.05
TPM1-211ENST00000558314 NBPF6Q5VWK0 638 aa21.58■■□□□ 1.05
TPM1-211ENST00000558314 ZCRB1Q8TBF4 217 aaKnown RBP21.58■■□□□ 1.05
TPM1-211ENST00000558314 NBPF4Q96M43 638 aa21.58■■□□□ 1.05
TPM1-211ENST00000558314 FAM208AQ9UK61 1670 aaKnown RBP21.57■■□□□ 1.04
TPM1-211ENST00000558314 NSD3Q9BZ95 1437 aa21.57■■□□□ 1.04
TPM1-211ENST00000558314 PPM1GO15355 546 aaPredicted RBP21.57■■□□□ 1.04
TPM1-211ENST00000558314 PRIM1P49642 420 aaKnown RBP21.57■■□□□ 1.04
TPM1-211ENST00000558314 HSP90AB2PQ58FF8 381 aa21.57■■□□□ 1.04
TPM1-211ENST00000558314 RTL1A6NKG5 1358 aa21.57■■□□□ 1.04
TPM1-211ENST00000558314 RAPGEF4Q8WZA2 1011 aa21.56■■□□□ 1.04
TPM1-211ENST00000558314 CARD14Q9BXL6 1004 aa21.56■■□□□ 1.04
TPM1-211ENST00000558314 TIMELESSQ9UNS1 1208 aa21.56■■□□□ 1.04
TPM1-211ENST00000558314 BTAF1O14981 1849 aa21.56■■□□□ 1.04
TPM1-211ENST00000558314 RGPD2P0DJD1 1756 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms