RNA–Protein interactions for RNA: ENST00000558112.1

PSME1-204, Transcript of proteasome activator subunit 1, humanhuman

TSL 5

Gene PSME1, Length 651 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME1-204ENST00000558112 USP6P35125 1406 aa13.19□□□□□ -0.3
PSME1-204ENST00000558112 NINLQ9Y2I6 1382 aa13.19□□□□□ -0.3
PSME1-204ENST00000558112 PLSCR1O15162 318 aa13.17□□□□□ -0.3
PSME1-204ENST00000558112 L3MBTL2Q969R5 705 aa13.17□□□□□ -0.3
PSME1-204ENST00000558112 TOPAZ1Q8N9V7 1692 aa13.17□□□□□ -0.3
PSME1-204ENST00000558112 KTN1Q86UP2 1357 aaKnown RBP13.17□□□□□ -0.3
PSME1-204ENST00000558112 TTC21BQ7Z4L5 1316 aa13.16□□□□□ -0.3
PSME1-204ENST00000558112 MARCH10Q8NA82 808 aaPredicted RBP13.16□□□□□ -0.3
PSME1-204ENST00000558112 ACSBG1Q96GR2 724 aa13.16□□□□□ -0.3
PSME1-204ENST00000558112 CARD10Q9BWT7 1032 aa13.16□□□□□ -0.3
PSME1-204ENST00000558112 QRICH2Q9H0J4 1663 aa13.15□□□□□ -0.3
PSME1-204ENST00000558112 TXNRD1Q16881 649 aa13.15□□□□□ -0.3
PSME1-204ENST00000558112 HDGFL2Q7Z4V5 671 aaPredicted RBP13.15□□□□□ -0.3
PSME1-204ENST00000558112 PELP1Q8IZL8 1130 aaKnown RBP13.15□□□□□ -0.3
PSME1-204ENST00000558112 AXIN2Q9Y2T1 843 aa13.15□□□□□ -0.3
PSME1-204ENST00000558112 KIAA1210Q9ULL0 1709 aa13.15□□□□□ -0.3
PSME1-204ENST00000558112 TTC21AQ8NDW8 1320 aa13.14□□□□□ -0.31
PSME1-204ENST00000558112 CPSF1Q10570 1443 aaKnown RBP13.14□□□□□ -0.31
PSME1-204ENST00000558112 NUP188Q5SRE5 1749 aa13.14□□□□□ -0.31
PSME1-204ENST00000558112 ANO8Q9HCE9 1232 aaPredicted RBP13.14□□□□□ -0.31
PSME1-204ENST00000558112 LMO7Q8WWI1 1683 aa13.13□□□□□ -0.31
PSME1-204ENST00000558112 CCDC7Q96M83 1385 aa13.13□□□□□ -0.31
PSME1-204ENST00000558112 PTF1AQ7RTS3 328 aa13.13□□□□□ -0.31
PSME1-204ENST00000558112 ARHGEF25Q86VW2 580 aa13.13□□□□□ -0.31
PSME1-204ENST00000558112 SYTL4Q96C24 671 aaPredicted RBP13.13□□□□□ -0.31
PSME1-204ENST00000558112 LTV1Q96GA3 475 aaPredicted RBP13.13□□□□□ -0.31
PSME1-204ENST00000558112 RREB1Q92766 1687 aa13.12□□□□□ -0.31
PSME1-204ENST00000558112 SLC15A2Q16348 729 aa13.12□□□□□ -0.31
PSME1-204ENST00000558112 SIN3AQ96ST3 1273 aa13.12□□□□□ -0.31
PSME1-204ENST00000558112 PARP4Q9UKK3 1724 aaKnown RBP13.12□□□□□ -0.31
PSME1-204ENST00000558112 MSH5O43196 834 aa13.11□□□□□ -0.31
PSME1-204ENST00000558112 IL2RBP14784 551 aa13.11□□□□□ -0.31
PSME1-204ENST00000558112 GPR162Q16538 588 aa13.11□□□□□ -0.31
PSME1-204ENST00000558112 CARD11Q9BXL7 1154 aa13.11□□□□□ -0.31
PSME1-204ENST00000558112 PDGFDQ9GZP0 370 aaPredicted RBP13.11□□□□□ -0.31
PSME1-204ENST00000558112 MTFR1LQ9H019 292 aa13.11□□□□□ -0.31
PSME1-204ENST00000558112 DDX54Q8TDD1 881 aaKnown RBP13.1□□□□□ -0.31
PSME1-204ENST00000558112 FHDC1Q9C0D6 1143 aaPredicted RBP13.1□□□□□ -0.31
PSME1-204ENST00000558112 TERF2IPQ9NYB0 399 aa13.1□□□□□ -0.31
PSME1-204ENST00000558112 LRRC37A3O60309 1634 aa13.1□□□□□ -0.31
PSME1-204ENST00000558112 SLIT3O75094 1523 aa13.09□□□□□ -0.31
PSME1-204ENST00000558112 POLD1P28340 1107 aa13.09□□□□□ -0.31
PSME1-204ENST00000558112 NME9Q86XW9 330 aa13.09□□□□□ -0.31
PSME1-204ENST00000558112 ANKRD24Q8TF21 1146 aa13.09□□□□□ -0.31
PSME1-204ENST00000558112 ARXQ96QS3 562 aa13.09□□□□□ -0.31
PSME1-204ENST00000558112 PROM2Q8N271 834 aa13.07□□□□□ -0.32
PSME1-204ENST00000558112 PIK3C2AO00443 1686 aa13.07□□□□□ -0.32
PSME1-204ENST00000558112 TRPM1Q7Z4N2 1603 aa13.06□□□□□ -0.32
PSME1-204ENST00000558112 TNS2Q63HR2 1409 aa13.06□□□□□ -0.32
PSME1-204ENST00000558112 AMPHP49418 695 aa13.06□□□□□ -0.32
PSME1-204ENST00000558112 SYT17Q9BSW7 474 aa13.06□□□□□ -0.32
PSME1-204ENST00000558112 TFCP2L1Q9NZI6 479 aa13.06□□□□□ -0.32
PSME1-204ENST00000558112 AKAP12Q02952 1782 aa13.05□□□□□ -0.32
PSME1-204ENST00000558112 SENP3-EIF4A1A0A087X0R7 540 aa13.05□□□□□ -0.32
PSME1-204ENST00000558112 KAT6BQ8WYB5 2073 aa13.04□□□□□ -0.32
PSME1-204ENST00000558112 PTGER2P43116 358 aa13.04□□□□□ -0.32
PSME1-204ENST00000558112 ZNF784Q8NCA9 323 aaPredicted RBP13.04□□□□□ -0.32
PSME1-204ENST00000558112 COG3Q96JB2 828 aa13.04□□□□□ -0.32
PSME1-204ENST00000558112 ERBB3P21860 1342 aa13.04□□□□□ -0.32
PSME1-204ENST00000558112 TONSLQ96HA7 1378 aa13.04□□□□□ -0.32
PSME1-204ENST00000558112 SLC12A5Q9H2X9 1139 aa13.03□□□□□ -0.32
PSME1-204ENST00000558112 PEAK1Q9H792 1746 aa13.02□□□□□ -0.32
PSME1-204ENST00000558112 BCL9O00512 1426 aa13.02□□□□□ -0.33
PSME1-204ENST00000558112 RGPD3A6NKT7 1758 aaPredicted RBP13.02□□□□□ -0.33
PSME1-204ENST00000558112 RGPD4Q7Z3J3 1758 aa13.02□□□□□ -0.33
PSME1-204ENST00000558112 MYOM1P52179 1685 aa13.01□□□□□ -0.33
PSME1-204ENST00000558112 SBF2Q86WG5 1849 aa13□□□□□ -0.33
PSME1-204ENST00000558112 PRIM1P49642 420 aaKnown RBP13□□□□□ -0.33
PSME1-204ENST00000558112 SLC27A3Q5K4L6 730 aa13□□□□□ -0.33
PSME1-204ENST00000558112 RGPD5Q99666 1765 aa12.99□□□□□ -0.33
PSME1-204ENST00000558112 NFAT5O94916 1531 aa12.99□□□□□ -0.33
PSME1-204ENST00000558112 KCNQ4P56696 695 aa12.99□□□□□ -0.33
PSME1-204ENST00000558112 ZNF827Q17R98 1081 aa12.99□□□□□ -0.33
PSME1-204ENST00000558112 CCNL1Q9UK58 526 aaPredicted RBP12.99□□□□□ -0.33
PSME1-204ENST00000558112 COL18A1P39060 1754 aa12.99□□□□□ -0.33
PSME1-204ENST00000558112 EDC4Q6P2E9 1401 aaKnown RBP12.98□□□□□ -0.33
PSME1-204ENST00000558112 USP31Q70CQ4 1352 aa12.98□□□□□ -0.33
PSME1-204ENST00000558112 WNK3Q9BYP7 1800 aa12.98□□□□□ -0.33
PSME1-204ENST00000558112 GIGYF1O75420 1035 aaPredicted RBP12.98□□□□□ -0.33
PSME1-204ENST00000558112 ZCRB1Q8TBF4 217 aaKnown RBP12.98□□□□□ -0.33
PSME1-204ENST00000558112 SLC16A10Q8TF71 515 aa12.98□□□□□ -0.33
PSME1-204ENST00000558112 RAPGEF4Q8WZA2 1011 aa12.98□□□□□ -0.33
PSME1-204ENST00000558112 IP6K1Q92551 441 aa12.98□□□□□ -0.33
PSME1-204ENST00000558112 ABCC6O95255 1503 aa12.98□□□□□ -0.33
PSME1-204ENST00000558112 CASZ1Q86V15 1759 aa12.97□□□□□ -0.33
PSME1-204ENST00000558112 SMG6Q86US8 1419 aaKnown RBP12.96□□□□□ -0.33
PSME1-204ENST00000558112 USP47Q96K76 1375 aa12.96□□□□□ -0.33
PSME1-204ENST00000558112 SBNO2Q9Y2G9 1366 aa12.96□□□□□ -0.33
PSME1-204ENST00000558112 SLC24A1O60721 1099 aa12.96□□□□□ -0.33
PSME1-204ENST00000558112 LRRC4BQ9NT99 713 aa12.96□□□□□ -0.33
PSME1-204ENST00000558112 NHSQ6T4R5 1651 aa12.96□□□□□ -0.34
PSME1-204ENST00000558112 A0A1W2PP64 1363 aa12.95□□□□□ -0.34
PSME1-204ENST00000558112 HMGB2P26583 209 aaKnown RBP12.95□□□□□ -0.34
PSME1-204ENST00000558112 C1QTNF8P60827 252 aa12.95□□□□□ -0.34
PSME1-204ENST00000558112 MSL1Q68DK7 614 aa12.95□□□□□ -0.34
PSME1-204ENST00000558112 TATP17735 454 aaPredicted RBP12.94□□□□□ -0.34
PSME1-204ENST00000558112 USHBP1Q8N6Y0 703 aa12.94□□□□□ -0.34
PSME1-204ENST00000558112 PPM1GO15355 546 aaPredicted RBP12.93□□□□□ -0.34
PSME1-204ENST00000558112 GRIN3BO60391 1043 aa12.93□□□□□ -0.34
PSME1-204ENST00000558112 HOXC9P31274 260 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms