RNA–Protein interactions for RNA: ENST00000557998.5

RNF111-202, Transcript of ring finger protein 111, humanhuman

TSL 2 BASIC

Gene RNF111, Length 4,803 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111-202ENST00000557998 PREX1Q8TCU6 1659 aa13.49□□□□□ -0.25
RNF111-202ENST00000557998 EDC4Q6P2E9 1401 aaKnown RBP13.49□□□□□ -0.25
RNF111-202ENST00000557998 TMEM57Q8N5G2 664 aa13.49□□□□□ -0.25
RNF111-202ENST00000557998 SPRYD3Q8NCJ5 442 aa13.49□□□□□ -0.25
RNF111-202ENST00000557998 TULP4Q9NRJ4 1543 aa13.49□□□□□ -0.25
RNF111-202ENST00000557998 SLC4A3P48751 1232 aa13.48□□□□□ -0.25
RNF111-202ENST00000557998 GOLGA6L22H0YM25 854 aa13.48□□□□□ -0.25
RNF111-202ENST00000557998 SKAP1Q86WV1 359 aa13.48□□□□□ -0.25
RNF111-202ENST00000557998 CLTCQ00610 1675 aaKnown RBP13.48□□□□□ -0.25
RNF111-202ENST00000557998 TRIM27P14373 513 aa13.47□□□□□ -0.25
RNF111-202ENST00000557998 MCM10Q7L590 875 aa13.47□□□□□ -0.25
RNF111-202ENST00000557998 CCDC30Q5VVM6 783 aa13.47□□□□□ -0.25
RNF111-202ENST00000557998 TRMT2AQ8IZ69 625 aaKnown RBP13.47□□□□□ -0.25
RNF111-202ENST00000557998 RAPGEF4Q8WZA2 1011 aa13.47□□□□□ -0.25
RNF111-202ENST00000557998 SLC4A2P04920 1241 aa13.46□□□□□ -0.25
RNF111-202ENST00000557998 KCNH5Q8NCM2 988 aa13.46□□□□□ -0.25
RNF111-202ENST00000557998 RBM33Q96EV2 1170 aaKnown RBP13.46□□□□□ -0.25
RNF111-202ENST00000557998 MCCP23508 829 aa13.46□□□□□ -0.26
RNF111-202ENST00000557998 PLEKHO1Q53GL0 409 aaPredicted RBP13.46□□□□□ -0.26
RNF111-202ENST00000557998 NCBP3Q53F19 620 aaKnown RBP13.46□□□□□ -0.26
RNF111-202ENST00000557998 HSP90AB2PQ58FF8 381 aa13.46□□□□□ -0.26
RNF111-202ENST00000557998 PTPRMP28827 1452 aa13.45□□□□□ -0.26
RNF111-202ENST00000557998 C1orf115Q9H7X2 142 aa13.45□□□□□ -0.26
RNF111-202ENST00000557998 GCC1Q96CN9 775 aa13.45□□□□□ -0.26
RNF111-202ENST00000557998 TMEM131LA2VDJ0 1609 aa13.45□□□□□ -0.26
RNF111-202ENST00000557998 NLRP2Q9NX02 1062 aa13.45□□□□□ -0.26
RNF111-202ENST00000557998 RSPH6AQ9H0K4 717 aa13.44□□□□□ -0.26
RNF111-202ENST00000557998 ANP32BQ92688 251 aaKnown RBP13.44□□□□□ -0.26
RNF111-202ENST00000557998 MBIPQ9NS73 344 aa13.44□□□□□ -0.26
RNF111-202ENST00000557998 ARHGEF40Q8TER5 1519 aa13.44□□□□□ -0.26
RNF111-202ENST00000557998 KCNA6P17658 529 aa13.43□□□□□ -0.26
RNF111-202ENST00000557998 XPCQ01831 940 aaPredicted RBP13.43□□□□□ -0.26
RNF111-202ENST00000557998 EIF4A2Q14240 407 aaKnown RBP13.43□□□□□ -0.26
RNF111-202ENST00000557998 SIGLEC1Q9BZZ2 1709 aa13.43□□□□□ -0.26
RNF111-202ENST00000557998 FAM83GA6ND36 823 aa13.43□□□□□ -0.26
RNF111-202ENST00000557998 GNAT3A8MTJ3 354 aa13.43□□□□□ -0.26
RNF111-202ENST00000557998 IFT172Q9UG01 1749 aa13.43□□□□□ -0.26
RNF111-202ENST00000557998 PHACTR3Q96KR7 559 aa13.43□□□□□ -0.26
RNF111-202ENST00000557998 TRIM6-TRIM34B2RNG4 842 aa13.43□□□□□ -0.26
RNF111-202ENST00000557998 DEKP35659 375 aaKnown RBP13.43□□□□□ -0.26
RNF111-202ENST00000557998 MYO3AQ8NEV4 1616 aa13.42□□□□□ -0.26
RNF111-202ENST00000557998 IGHDP01880 384 aa13.42□□□□□ -0.26
RNF111-202ENST00000557998 FOXO3O43524 673 aa13.42□□□□□ -0.26
RNF111-202ENST00000557998 USP35Q9P2H5 1018 aa13.42□□□□□ -0.26
RNF111-202ENST00000557998 ATP7BP35670 1465 aa13.42□□□□□ -0.26
RNF111-202ENST00000557998 ZNF530Q6P9A1 599 aaPredicted RBP13.42□□□□□ -0.26
RNF111-202ENST00000557998 PLEKHG1Q9ULL1 1385 aa13.41□□□□□ -0.26
RNF111-202ENST00000557998 GNAI3P08754 354 aa13.41□□□□□ -0.26
RNF111-202ENST00000557998 AEBP1Q8IUX7 1158 aa13.41□□□□□ -0.26
RNF111-202ENST00000557998 TTC5Q8N0Z6 440 aa13.41□□□□□ -0.26
RNF111-202ENST00000557998 MIS18AQ9NYP9 233 aa13.41□□□□□ -0.26
RNF111-202ENST00000557998 ROBO2Q9HCK4 1378 aa13.41□□□□□ -0.26
RNF111-202ENST00000557998 FAM135BQ49AJ0 1406 aa13.41□□□□□ -0.26
RNF111-202ENST00000557998 MYOM1P52179 1685 aa13.41□□□□□ -0.26
RNF111-202ENST00000557998 IL13P35225 146 aa13.41□□□□□ -0.26
RNF111-202ENST00000557998 HDGFL1Q5TGJ6 251 aa13.41□□□□□ -0.26
RNF111-202ENST00000557998 TRIM35Q9UPQ4 493 aa13.41□□□□□ -0.26
RNF111-202ENST00000557998 NLRP1Q9C000 1473 aa13.4□□□□□ -0.26
RNF111-202ENST00000557998 PLEKHG3A1L390 1219 aa13.4□□□□□ -0.26
RNF111-202ENST00000557998 C22orf23Q9BZE7 217 aa13.4□□□□□ -0.26
RNF111-202ENST00000557998 SPATA31D1Q6ZQQ2 1576 aa13.4□□□□□ -0.26
RNF111-202ENST00000557998 CCT4P50991 539 aaKnown RBP13.4□□□□□ -0.26
RNF111-202ENST00000557998 KCNJ4P48050 445 aa13.4□□□□□ -0.26
RNF111-202ENST00000557998 C9orf78Q9NZ63 289 aaPredicted RBP13.39□□□□□ -0.27
RNF111-202ENST00000557998 MSH5O43196 834 aa13.39□□□□□ -0.27
RNF111-202ENST00000557998 RLBP1P12271 317 aa13.39□□□□□ -0.27
RNF111-202ENST00000557998 KIAA1211Q6ZU35 1233 aa13.39□□□□□ -0.27
RNF111-202ENST00000557998 DDX58O95786 925 aaKnown RBP13.39□□□□□ -0.27
RNF111-202ENST00000557998 CHD1LQ86WJ1 897 aa13.39□□□□□ -0.27
RNF111-202ENST00000557998 REREQ9P2R6 1566 aa13.39□□□□□ -0.27
RNF111-202ENST00000557998 FLT4P35916 1363 aa13.39□□□□□ -0.27
RNF111-202ENST00000557998 GPATCH3Q96I76 525 aa13.39□□□□□ -0.27
RNF111-202ENST00000557998 PLEKHF1Q96S99 279 aa13.39□□□□□ -0.27
RNF111-202ENST00000557998 PCDHB15Q9Y5E8 787 aa13.39□□□□□ -0.27
RNF111-202ENST00000557998 UBTFL1P0CB47 393 aaPredicted RBP13.38□□□□□ -0.27
RNF111-202ENST00000557998 ARHGEF28Q8N1W1 1705 aaKnown RBP13.38□□□□□ -0.27
RNF111-202ENST00000557998 ARHGAP45Q92619 1136 aa13.38□□□□□ -0.27
RNF111-202ENST00000557998 TNNQ9UQP3 1299 aa13.38□□□□□ -0.27
RNF111-202ENST00000557998 NEXNQ0ZGT2 675 aa13.38□□□□□ -0.27
RNF111-202ENST00000557998 PRR36Q9H6K5 1346 aa13.38□□□□□ -0.27
RNF111-202ENST00000557998 EVA1CP58658 441 aa13.38□□□□□ -0.27
RNF111-202ENST00000557998 USHBP1Q8N6Y0 703 aa13.37□□□□□ -0.27
RNF111-202ENST00000557998 ZNF330Q9Y3S2 320 aaPredicted RBP13.37□□□□□ -0.27
RNF111-202ENST00000557998 MAP3K19Q56UN5 1328 aa13.37□□□□□ -0.27
RNF111-202ENST00000557998 GNAI2P04899 355 aa13.37□□□□□ -0.27
RNF111-202ENST00000557998 TAF7Q15545 349 aaPredicted RBP13.36□□□□□ -0.27
RNF111-202ENST00000557998 RPAP2Q8IXW5 612 aaPredicted RBP13.36□□□□□ -0.27
RNF111-202ENST00000557998 TATP17735 454 aaPredicted RBP13.36□□□□□ -0.27
RNF111-202ENST00000557998 ZC3H6P61129 1189 aaKnown RBP13.36□□□□□ -0.27
RNF111-202ENST00000557998 RILPL2Q969X0 211 aa13.36□□□□□ -0.27
RNF111-202ENST00000557998 CDC45O75419 566 aa13.36□□□□□ -0.27
RNF111-202ENST00000557998 DLC1Q96QB1 1528 aa13.36□□□□□ -0.27
RNF111-202ENST00000557998 VAMP4O75379 141 aa13.36□□□□□ -0.27
RNF111-202ENST00000557998 PHF23Q9BUL5 403 aaPredicted RBP13.36□□□□□ -0.27
RNF111-202ENST00000557998 REC8O95072 547 aa13.35□□□□□ -0.27
RNF111-202ENST00000557998 NCLP19338 710 aaKnown RBP13.35□□□□□ -0.27
RNF111-202ENST00000557998 C8orf58Q8NAV2 365 aa13.35□□□□□ -0.27
RNF111-202ENST00000557998 MYO5BQ9ULV0 1848 aa13.35□□□□□ -0.27
RNF111-202ENST00000557998 INTS3Q68E01 1043 aaKnown RBP13.35□□□□□ -0.27
RNF111-202ENST00000557998 HDAC1Q13547 482 aaPredicted RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms