RNA–Protein interactions for RNA: ENST00000557641.5

GABRB3-212, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 828 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-212ENST00000557641 USP19O94966 1318 aa13.61□□□□□ -0.23
GABRB3-212ENST00000557641 COL3A1P02461 1466 aaPredicted RBP13.61□□□□□ -0.23
GABRB3-212ENST00000557641 PITPNM1O00562 1244 aa13.6□□□□□ -0.23
GABRB3-212ENST00000557641 PPM1GO15355 546 aaPredicted RBP13.6□□□□□ -0.23
GABRB3-212ENST00000557641 PXDNQ92626 1479 aa13.6□□□□□ -0.23
GABRB3-212ENST00000557641 SOS2Q07890 1332 aaPredicted RBP13.6□□□□□ -0.23
GABRB3-212ENST00000557641 SPATA31A3Q5VYP0 1347 aa13.6□□□□□ -0.23
GABRB3-212ENST00000557641 TNS3Q68CZ2 1445 aa13.59□□□□□ -0.23
GABRB3-212ENST00000557641 XPCQ01831 940 aaPredicted RBP13.59□□□□□ -0.23
GABRB3-212ENST00000557641 RRS1Q15050 365 aaKnown RBP13.59□□□□□ -0.23
GABRB3-212ENST00000557641 IQSEC2Q5JU85 1478 aa13.59□□□□□ -0.23
GABRB3-212ENST00000557641 MAP3K19Q56UN5 1328 aa13.59□□□□□ -0.23
GABRB3-212ENST00000557641 TRPM3Q9HCF6 1732 aaPredicted RBP13.59□□□□□ -0.23
GABRB3-212ENST00000557641 RTL1A6NKG5 1358 aa13.58□□□□□ -0.23
GABRB3-212ENST00000557641 FLT4P35916 1363 aa13.58□□□□□ -0.23
GABRB3-212ENST00000557641 TOM1O60784 492 aa13.58□□□□□ -0.24
GABRB3-212ENST00000557641 U2AF1L5P0DN76 240 aaPredicted RBP13.58□□□□□ -0.24
GABRB3-212ENST00000557641 U2AF1Q01081 240 aaKnown RBP eCLIP13.58□□□□□ -0.24
GABRB3-212ENST00000557641 NUTM2GQ5VZR2 741 aa13.58□□□□□ -0.24
GABRB3-212ENST00000557641 GCP02774 474 aa13.57□□□□□ -0.24
GABRB3-212ENST00000557641 FBLN1P23142 703 aa13.57□□□□□ -0.24
GABRB3-212ENST00000557641 IL13P35225 146 aa13.57□□□□□ -0.24
GABRB3-212ENST00000557641 AMPHP49418 695 aa13.57□□□□□ -0.24
GABRB3-212ENST00000557641 LMOD2Q6P5Q4 547 aa13.57□□□□□ -0.24
GABRB3-212ENST00000557641 RUNDC1Q96C34 613 aa13.57□□□□□ -0.24
GABRB3-212ENST00000557641 SLIT3O75094 1523 aa13.57□□□□□ -0.24
GABRB3-212ENST00000557641 U2SURPO15042 1029 aaKnown RBP13.56□□□□□ -0.24
GABRB3-212ENST00000557641 FCHSD2O94868 740 aa13.56□□□□□ -0.24
GABRB3-212ENST00000557641 PDE3BQ13370 1112 aa13.55□□□□□ -0.24
GABRB3-212ENST00000557641 SHPRHQ149N8 1683 aa13.55□□□□□ -0.24
GABRB3-212ENST00000557641 ALS2Q96Q42 1657 aa13.55□□□□□ -0.24
GABRB3-212ENST00000557641 SOX12O15370 315 aa13.54□□□□□ -0.24
GABRB3-212ENST00000557641 NEFMP07197 916 aa13.54□□□□□ -0.24
GABRB3-212ENST00000557641 HOXC9P31274 260 aa13.54□□□□□ -0.24
GABRB3-212ENST00000557641 ARHGEF25Q86VW2 580 aa13.54□□□□□ -0.24
GABRB3-212ENST00000557641 IP6K1Q92551 441 aa13.54□□□□□ -0.24
GABRB3-212ENST00000557641 DDX17Q92841 729 aaKnown RBP13.54□□□□□ -0.24
GABRB3-212ENST00000557641 MAP2P11137 1827 aaKnown RBP13.54□□□□□ -0.24
GABRB3-212ENST00000557641 NFAT5O94916 1531 aa13.54□□□□□ -0.24
GABRB3-212ENST00000557641 EIF4A2Q14240 407 aaKnown RBP13.53□□□□□ -0.24
GABRB3-212ENST00000557641 CHRDL2Q6WN34 429 aa13.53□□□□□ -0.24
GABRB3-212ENST00000557641 LRRC59Q96AG4 307 aaKnown RBP13.53□□□□□ -0.24
GABRB3-212ENST00000557641 MED1Q15648 1581 aaPredicted RBP13.53□□□□□ -0.24
GABRB3-212ENST00000557641 MARF1Q9Y4F3 1742 aaKnown RBP13.53□□□□□ -0.24
GABRB3-212ENST00000557641 HSP90AB2PQ58FF8 381 aa13.52□□□□□ -0.25
GABRB3-212ENST00000557641 NHSL1Q5SYE7 1610 aa13.51□□□□□ -0.25
GABRB3-212ENST00000557641 AHDC1Q5TGY3 1603 aaPredicted RBP13.51□□□□□ -0.25
GABRB3-212ENST00000557641 MAPK8IP3Q9UPT6 1336 aa13.51□□□□□ -0.25
GABRB3-212ENST00000557641 CPDO75976 1380 aa13.5□□□□□ -0.25
GABRB3-212ENST00000557641 APAF1O14727 1248 aa13.5□□□□□ -0.25
GABRB3-212ENST00000557641 PRR29P0C7W0 189 aa13.5□□□□□ -0.25
GABRB3-212ENST00000557641 CCDC146Q8IYE0 955 aa13.5□□□□□ -0.25
GABRB3-212ENST00000557641 PLEKHF1Q96S99 279 aa13.5□□□□□ -0.25
GABRB3-212ENST00000557641 FBXO3Q9UK99 471 aa13.5□□□□□ -0.25
GABRB3-212ENST00000557641 PHRF1Q9P1Y6 1649 aaKnown RBP13.5□□□□□ -0.25
GABRB3-212ENST00000557641 CCDC27Q2M243 656 aa13.49□□□□□ -0.25
GABRB3-212ENST00000557641 TCP11L2Q8N4U5 519 aa13.49□□□□□ -0.25
GABRB3-212ENST00000557641 CERKQ8TCT0 537 aa13.49□□□□□ -0.25
GABRB3-212ENST00000557641 RSPH6AQ9H0K4 717 aa13.49□□□□□ -0.25
GABRB3-212ENST00000557641 PEAK1Q9H792 1746 aa13.49□□□□□ -0.25
GABRB3-212ENST00000557641 ABCC6O95255 1503 aa13.49□□□□□ -0.25
GABRB3-212ENST00000557641 IGSF1Q8N6C5 1336 aa13.48□□□□□ -0.25
GABRB3-212ENST00000557641 ROBO1Q9Y6N7 1651 aa13.47□□□□□ -0.25
GABRB3-212ENST00000557641 UBAP1LF5GYI3 381 aa13.47□□□□□ -0.25
GABRB3-212ENST00000557641 PRKAR2BP31323 418 aa13.47□□□□□ -0.25
GABRB3-212ENST00000557641 ZNF521Q96K83 1311 aa13.46□□□□□ -0.25
GABRB3-212ENST00000557641 HAP1P54257 671 aaPredicted RBP13.46□□□□□ -0.25
GABRB3-212ENST00000557641 SULT6B1Q6IMI4 303 aa13.46□□□□□ -0.25
GABRB3-212ENST00000557641 EYA1Q99502 592 aa13.46□□□□□ -0.25
GABRB3-212ENST00000557641 KDRP35968 1356 aa13.45□□□□□ -0.26
GABRB3-212ENST00000557641 HMOX1P09601 288 aa13.45□□□□□ -0.26
GABRB3-212ENST00000557641 TMPOP42166 694 aaKnown RBP13.45□□□□□ -0.26
GABRB3-212ENST00000557641 ZC3H6P61129 1189 aaKnown RBP13.45□□□□□ -0.26
GABRB3-212ENST00000557641 GOLGA2Q08379 1002 aa13.45□□□□□ -0.26
GABRB3-212ENST00000557641 WDR63Q8IWG1 891 aa13.45□□□□□ -0.26
GABRB3-212ENST00000557641 ZBTB7CA1YPR0 619 aa13.44□□□□□ -0.26
GABRB3-212ENST00000557641 LMOD3Q0VAK6 560 aa13.44□□□□□ -0.26
GABRB3-212ENST00000557641 CABLES1Q8TDN4 633 aa13.44□□□□□ -0.26
GABRB3-212ENST00000557641 SALL2Q9Y467 1007 aaPredicted RBP13.44□□□□□ -0.26
GABRB3-212ENST00000557641 RGPD1P0DJD0 1748 aa13.43□□□□□ -0.26
GABRB3-212ENST00000557641 NFE2L2Q16236 605 aa13.43□□□□□ -0.26
GABRB3-212ENST00000557641 WWC1Q8IX03 1113 aa13.43□□□□□ -0.26
GABRB3-212ENST00000557641 ANKRD24Q8TF21 1146 aa13.43□□□□□ -0.26
GABRB3-212ENST00000557641 E9PSI1 815 aa13.42□□□□□ -0.26
GABRB3-212ENST00000557641 PLEKHG5O94827 1062 aa13.42□□□□□ -0.26
GABRB3-212ENST00000557641 PIP4K2BP78356 416 aa13.42□□□□□ -0.26
GABRB3-212ENST00000557641 LTV1Q96GA3 475 aaPredicted RBP13.42□□□□□ -0.26
GABRB3-212ENST00000557641 PRDM11Q9NQV5 511 aa13.42□□□□□ -0.26
GABRB3-212ENST00000557641 LTN1O94822 1766 aa13.42□□□□□ -0.26
GABRB3-212ENST00000557641 KIAA0232Q92628 1395 aa13.42□□□□□ -0.26
GABRB3-212ENST00000557641 CRYBG1Q9Y4K1 1723 aa13.42□□□□□ -0.26
GABRB3-212ENST00000557641 ERBB3P21860 1342 aa13.41□□□□□ -0.26
GABRB3-212ENST00000557641 RIPK4P57078 832 aa13.41□□□□□ -0.26
GABRB3-212ENST00000557641 CALD1Q05682 793 aaKnown RBP13.41□□□□□ -0.26
GABRB3-212ENST00000557641 AXIN2Q9Y2T1 843 aa13.41□□□□□ -0.26
GABRB3-212ENST00000557641 PLEKHG2Q9H7P9 1386 aa13.41□□□□□ -0.26
GABRB3-212ENST00000557641 IL16Q14005 1332 aa13.4□□□□□ -0.26
GABRB3-212ENST00000557641 NCAPD2Q15021 1401 aa13.4□□□□□ -0.26
GABRB3-212ENST00000557641 SLFN5Q08AF3 891 aa13.4□□□□□ -0.26
GABRB3-212ENST00000557641 NEUROD2Q15784 382 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms