RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 PSME1Q06323 249 aa8.76□□□□□ -1.01
VPS33B-207ENST00000557470 MAMSTRQ6ZN01 415 aa8.76□□□□□ -1.01
VPS33B-207ENST00000557470 NRXN1Q9ULB1 1477 aa8.76□□□□□ -1.01
VPS33B-207ENST00000557470 ARHGEF10O15013 1369 aa8.75□□□□□ -1.01
VPS33B-207ENST00000557470 FAM83GA6ND36 823 aa8.75□□□□□ -1.01
VPS33B-207ENST00000557470 HRCP23327 699 aa8.75□□□□□ -1.01
VPS33B-207ENST00000557470 LMOD2Q6P5Q4 547 aa8.75□□□□□ -1.01
VPS33B-207ENST00000557470 RGPD8O14715 1765 aaPredicted RBP8.75□□□□□ -1.01
VPS33B-207ENST00000557470 A0A0G2JS52 829 aa8.74□□□□□ -1.01
VPS33B-207ENST00000557470 BAG6P46379 1132 aa8.74□□□□□ -1.01
VPS33B-207ENST00000557470 MYT1Q01538 1121 aa8.74□□□□□ -1.01
VPS33B-207ENST00000557470 SAFB2Q14151 953 aaKnown RBP eCLIP8.74□□□□□ -1.01
VPS33B-207ENST00000557470 FAM98CQ17RN3 349 aaKnown RBP8.74□□□□□ -1.01
VPS33B-207ENST00000557470 RNF25Q96BH1 459 aaPredicted RBP8.74□□□□□ -1.01
VPS33B-207ENST00000557470 SIRT1Q96EB6 747 aa8.74□□□□□ -1.01
VPS33B-207ENST00000557470 OCEL1Q9H607 264 aa8.74□□□□□ -1.01
VPS33B-207ENST00000557470 SCUBE2Q9NQ36 999 aa8.74□□□□□ -1.01
VPS33B-207ENST00000557470 NRAPQ86VF7 1730 aa8.74□□□□□ -1.01
VPS33B-207ENST00000557470 PRAM1Q96QH2 718 aa8.73□□□□□ -1.01
VPS33B-207ENST00000557470 C14orf93Q9H972 538 aaKnown RBP8.73□□□□□ -1.01
VPS33B-207ENST00000557470 KDM2AQ9Y2K7 1162 aa8.73□□□□□ -1.01
VPS33B-207ENST00000557470 EN1Q05925 392 aaPredicted RBP8.72□□□□□ -1.01
VPS33B-207ENST00000557470 GOLGA2Q08379 1002 aa8.72□□□□□ -1.01
VPS33B-207ENST00000557470 CFAP70Q5T0N1 1121 aa8.72□□□□□ -1.01
VPS33B-207ENST00000557470 FAM182BQ5T319 152 aa8.72□□□□□ -1.01
VPS33B-207ENST00000557470 PMFBP1Q8TBY8 1022 aa8.72□□□□□ -1.01
VPS33B-207ENST00000557470 MPHOSPH9Q99550 1183 aa8.72□□□□□ -1.01
VPS33B-207ENST00000557470 BTG4Q9NY30 223 aa8.72□□□□□ -1.01
VPS33B-207ENST00000557470 DHX57Q6P158 1386 aaKnown RBP8.72□□□□□ -1.01
VPS33B-207ENST00000557470 ANKARQ7Z5J8 1434 aa8.71□□□□□ -1.01
VPS33B-207ENST00000557470 TRPM3Q9HCF6 1732 aaPredicted RBP8.71□□□□□ -1.01
VPS33B-207ENST00000557470 MKRN3Q13064 507 aaKnown RBP8.71□□□□□ -1.02
VPS33B-207ENST00000557470 PDCD7Q8N8D1 485 aaKnown RBP8.71□□□□□ -1.02
VPS33B-207ENST00000557470 CABP2Q9NPB3 220 aa8.71□□□□□ -1.02
VPS33B-207ENST00000557470 DLC1Q96QB1 1528 aa8.7□□□□□ -1.02
VPS33B-207ENST00000557470 ADGRB2O60241 1585 aa8.7□□□□□ -1.02
VPS33B-207ENST00000557470 ALS2Q96Q42 1657 aa8.7□□□□□ -1.02
VPS33B-207ENST00000557470 THSD7AQ9UPZ6 1657 aa8.7□□□□□ -1.02
VPS33B-207ENST00000557470 R3HDM1Q15032 1099 aaKnown RBP8.7□□□□□ -1.02
VPS33B-207ENST00000557470 RGPD1P0DJD0 1748 aa8.7□□□□□ -1.02
VPS33B-207ENST00000557470 SPATA31A5Q5VU36 1347 aa8.7□□□□□ -1.02
VPS33B-207ENST00000557470 SPATA31A7Q8IWB4 1347 aa8.7□□□□□ -1.02
VPS33B-207ENST00000557470 COL14A1Q05707 1796 aaKnown RBP8.7□□□□□ -1.02
VPS33B-207ENST00000557470 DISP2A7MBM2 1401 aa8.7□□□□□ -1.02
VPS33B-207ENST00000557470 TNS1Q9HBL0 1735 aaKnown RBP8.69□□□□□ -1.02
VPS33B-207ENST00000557470 HIRIP3Q9BW71 556 aaPredicted RBP8.69□□□□□ -1.02
VPS33B-207ENST00000557470 POGKQ9P215 609 aa8.69□□□□□ -1.02
VPS33B-207ENST00000557470 PRR36Q9H6K5 1346 aa8.69□□□□□ -1.02
VPS33B-207ENST00000557470 ACIN1Q9UKV3 1341 aaKnown RBP8.69□□□□□ -1.02
VPS33B-207ENST00000557470 GPRASP1Q5JY77 1395 aa8.69□□□□□ -1.02
VPS33B-207ENST00000557470 ADGRB1O14514 1584 aa8.69□□□□□ -1.02
VPS33B-207ENST00000557470 RIOK3O14730 519 aaKnown RBP8.68□□□□□ -1.02
VPS33B-207ENST00000557470 EZH2Q15910 746 aaKnown RBP8.68□□□□□ -1.02
VPS33B-207ENST00000557470 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.68□□□□□ -1.02
VPS33B-207ENST00000557470 CRYBG1Q9Y4K1 1723 aa8.68□□□□□ -1.02
VPS33B-207ENST00000557470 MINK1Q8N4C8 1332 aaPredicted RBP8.67□□□□□ -1.02
VPS33B-207ENST00000557470 PRDM11Q9NQV5 511 aa8.67□□□□□ -1.02
VPS33B-207ENST00000557470 TULP4Q9NRJ4 1543 aa8.67□□□□□ -1.02
VPS33B-207ENST00000557470 EIF3AQ14152 1382 aaKnown RBP8.66□□□□□ -1.02
VPS33B-207ENST00000557470 SPATA31A1Q5TZJ5 1347 aa8.66□□□□□ -1.02
VPS33B-207ENST00000557470 TRIM37O94972 964 aa8.66□□□□□ -1.02
VPS33B-207ENST00000557470 CAMKK2Q96RR4 588 aa8.66□□□□□ -1.02
VPS33B-207ENST00000557470 TRAK1Q9UPV9 953 aa8.66□□□□□ -1.02
VPS33B-207ENST00000557470 KIAA0232Q92628 1395 aa8.65□□□□□ -1.02
VPS33B-207ENST00000557470 WASLO00401 505 aaPredicted RBP8.65□□□□□ -1.02
VPS33B-207ENST00000557470 DPY19L2Q6NUT2 758 aa8.65□□□□□ -1.02
VPS33B-207ENST00000557470 NGDNQ8NEJ9 315 aaKnown RBP8.65□□□□□ -1.02
VPS33B-207ENST00000557470 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.64□□□□□ -1.03
VPS33B-207ENST00000557470 CHRNA2Q15822 529 aa8.64□□□□□ -1.03
VPS33B-207ENST00000557470 LCE2DQ5TA82 110 aaPredicted RBP8.64□□□□□ -1.03
VPS33B-207ENST00000557470 FAM196AQ6ZSG2 479 aa8.64□□□□□ -1.03
VPS33B-207ENST00000557470 EFCAB3Q8N7B9 438 aa8.64□□□□□ -1.03
VPS33B-207ENST00000557470 SLAIN1Q8ND83 568 aa8.64□□□□□ -1.03
VPS33B-207ENST00000557470 ZFP91Q96JP5 570 aaPredicted RBP8.64□□□□□ -1.03
VPS33B-207ENST00000557470 STRN4Q9NRL3 753 aa8.64□□□□□ -1.03
VPS33B-207ENST00000557470 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.64□□□□□ -1.03
VPS33B-207ENST00000557470 ATP7BP35670 1465 aa8.64□□□□□ -1.03
VPS33B-207ENST00000557470 PARD3Q8TEW0 1356 aa8.63□□□□□ -1.03
VPS33B-207ENST00000557470 PHRF1Q9P1Y6 1649 aaKnown RBP8.63□□□□□ -1.03
VPS33B-207ENST00000557470 APBA3O96018 575 aa8.63□□□□□ -1.03
VPS33B-207ENST00000557470 USP35Q9P2H5 1018 aa8.63□□□□□ -1.03
VPS33B-207ENST00000557470 ZC3H6P61129 1189 aaKnown RBP8.62□□□□□ -1.03
VPS33B-207ENST00000557470 NUTM2GQ5VZR2 741 aa8.62□□□□□ -1.03
VPS33B-207ENST00000557470 FAM163AQ96GL9 167 aaPredicted RBP8.62□□□□□ -1.03
VPS33B-207ENST00000557470 RREB1Q92766 1687 aa8.62□□□□□ -1.03
VPS33B-207ENST00000557470 SSH2Q76I76 1423 aa8.62□□□□□ -1.03
VPS33B-207ENST00000557470 NUP188Q5SRE5 1749 aa8.61□□□□□ -1.03
VPS33B-207ENST00000557470 ECM2O94769 699 aaPredicted RBP8.61□□□□□ -1.03
VPS33B-207ENST00000557470 YY1P25490 414 aa8.61□□□□□ -1.03
VPS33B-207ENST00000557470 BARGINQ6ZT62 677 aa8.61□□□□□ -1.03
VPS33B-207ENST00000557470 NUDT16Q96DE0 195 aaKnown RBP8.61□□□□□ -1.03
VPS33B-207ENST00000557470 ITSN1Q15811 1721 aa8.6□□□□□ -1.03
VPS33B-207ENST00000557470 PDE3BQ13370 1112 aa8.6□□□□□ -1.03
VPS33B-207ENST00000557470 TMEM132AQ24JP5 1023 aa8.6□□□□□ -1.03
VPS33B-207ENST00000557470 LARP1Q6PKG0 1096 aaKnown RBP8.6□□□□□ -1.03
VPS33B-207ENST00000557470 NRKQ7Z2Y5 1582 aa8.6□□□□□ -1.03
VPS33B-207ENST00000557470 ARHGEF28Q8N1W1 1705 aaKnown RBP8.6□□□□□ -1.03
VPS33B-207ENST00000557470 POLR3AO14802 1390 aaPredicted RBP8.6□□□□□ -1.03
VPS33B-207ENST00000557470 CAMTA1Q9Y6Y1 1673 aa8.59□□□□□ -1.03
VPS33B-207ENST00000557470 RGL2O15211 777 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms