RNA–Protein interactions for RNA: ENST00000557382.1

PPP4R3A-212, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 844 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-212ENST00000557382 DZIP1LQ8IYY4 767 aaKnown RBP11.45□□□□□ -0.58
PPP4R3A-212ENST00000557382 RWDD1Q9H446 243 aaPredicted RBP11.45□□□□□ -0.58
PPP4R3A-212ENST00000557382 XRN1Q8IZH2 1706 aaKnown RBP11.45□□□□□ -0.58
PPP4R3A-212ENST00000557382 OVOS2A0A0J9YW53 1432 aa11.44□□□□□ -0.58
PPP4R3A-212ENST00000557382 USP6P35125 1406 aa11.44□□□□□ -0.58
PPP4R3A-212ENST00000557382 OVOS2Q6IE36 1432 aa11.44□□□□□ -0.58
PPP4R3A-212ENST00000557382 PTPRUQ92729 1446 aa11.44□□□□□ -0.58
PPP4R3A-212ENST00000557382 USP31Q70CQ4 1352 aa11.44□□□□□ -0.58
PPP4R3A-212ENST00000557382 TTC21BQ7Z4L5 1316 aa11.44□□□□□ -0.58
PPP4R3A-212ENST00000557382 TTC21AQ8NDW8 1320 aa11.44□□□□□ -0.58
PPP4R3A-212ENST00000557382 IGHDP01880 384 aa11.44□□□□□ -0.58
PPP4R3A-212ENST00000557382 DDX19BQ9UMR2 479 aa11.44□□□□□ -0.58
PPP4R3A-212ENST00000557382 SSH2Q76I76 1423 aa11.43□□□□□ -0.58
PPP4R3A-212ENST00000557382 RLBP1P12271 317 aa11.43□□□□□ -0.58
PPP4R3A-212ENST00000557382 GNAI1P63096 354 aa11.43□□□□□ -0.58
PPP4R3A-212ENST00000557382 C8orf34Q49A92 452 aa11.43□□□□□ -0.58
PPP4R3A-212ENST00000557382 ATF7IPQ6VMQ6 1270 aa11.43□□□□□ -0.58
PPP4R3A-212ENST00000557382 CHMP4BQ9H444 224 aaKnown RBP11.43□□□□□ -0.58
PPP4R3A-212ENST00000557382 SMC4Q9NTJ3 1288 aa11.43□□□□□ -0.58
PPP4R3A-212ENST00000557382 IFT57Q9NWB7 429 aa11.43□□□□□ -0.58
PPP4R3A-212ENST00000557382 EMILIN1Q9Y6C2 1016 aa11.43□□□□□ -0.58
PPP4R3A-212ENST00000557382 ANKARQ7Z5J8 1434 aa11.43□□□□□ -0.58
PPP4R3A-212ENST00000557382 ZNF853P0CG23 659 aa11.42□□□□□ -0.58
PPP4R3A-212ENST00000557382 FTSJ3Q8IY81 847 aaKnown RBP11.42□□□□□ -0.58
PPP4R3A-212ENST00000557382 SSH1Q8WYL5 1049 aa11.42□□□□□ -0.58
PPP4R3A-212ENST00000557382 ARHGAP45Q92619 1136 aa11.42□□□□□ -0.58
PPP4R3A-212ENST00000557382 TSR2Q969E8 191 aaKnown RBP11.42□□□□□ -0.58
PPP4R3A-212ENST00000557382 USP54Q70EL1 1684 aa11.42□□□□□ -0.58
PPP4R3A-212ENST00000557382 ACEP12821 1306 aa11.41□□□□□ -0.58
PPP4R3A-212ENST00000557382 RGPD1P0DJD0 1748 aa11.41□□□□□ -0.58
PPP4R3A-212ENST00000557382 PPM1GO15355 546 aaPredicted RBP11.41□□□□□ -0.58
PPP4R3A-212ENST00000557382 AMOTL2Q9Y2J4 779 aa11.41□□□□□ -0.58
PPP4R3A-212ENST00000557382 PAK3O75914 559 aaPredicted RBP11.4□□□□□ -0.58
PPP4R3A-212ENST00000557382 HDAC1Q13547 482 aaPredicted RBP11.4□□□□□ -0.58
PPP4R3A-212ENST00000557382 PCDHB15Q9Y5E8 787 aa11.4□□□□□ -0.58
PPP4R3A-212ENST00000557382 FMN2Q9NZ56 1722 aa11.4□□□□□ -0.58
PPP4R3A-212ENST00000557382 TRIM27P14373 513 aa11.39□□□□□ -0.59
PPP4R3A-212ENST00000557382 CEBPAP49715 358 aaPredicted RBP11.39□□□□□ -0.59
PPP4R3A-212ENST00000557382 HAP1P54257 671 aaPredicted RBP11.39□□□□□ -0.59
PPP4R3A-212ENST00000557382 PHACTR3Q96KR7 559 aa11.39□□□□□ -0.59
PPP4R3A-212ENST00000557382 CFAP44Q96MT7 982 aa11.39□□□□□ -0.59
PPP4R3A-212ENST00000557382 BCL2L13Q9BXK5 485 aa11.39□□□□□ -0.59
PPP4R3A-212ENST00000557382 ZRANB1Q9UGI0 708 aa11.39□□□□□ -0.59
PPP4R3A-212ENST00000557382 CEP170BQ9Y4F5 1589 aaPredicted RBP11.39□□□□□ -0.59
PPP4R3A-212ENST00000557382 ZNF142P52746 1687 aaPredicted RBP11.39□□□□□ -0.59
PPP4R3A-212ENST00000557382 KIF24Q5T7B8 1368 aa11.39□□□□□ -0.59
PPP4R3A-212ENST00000557382 NCKAP5LQ9HCH0 1330 aa11.38□□□□□ -0.59
PPP4R3A-212ENST00000557382 SETD1BQ9UPS6 1966 aaKnown RBP11.38□□□□□ -0.59
PPP4R3A-212ENST00000557382 RGS3P49796 1198 aa11.38□□□□□ -0.59
PPP4R3A-212ENST00000557382 NPM2Q86SE8 214 aaKnown RBP11.38□□□□□ -0.59
PPP4R3A-212ENST00000557382 NOB1Q9ULX3 412 aaKnown RBP11.38□□□□□ -0.59
PPP4R3A-212ENST00000557382 RGPD8O14715 1765 aaPredicted RBP11.38□□□□□ -0.59
PPP4R3A-212ENST00000557382 PEAK1Q9H792 1746 aa11.38□□□□□ -0.59
PPP4R3A-212ENST00000557382 CHD2O14647 1828 aaKnown RBP11.37□□□□□ -0.59
PPP4R3A-212ENST00000557382 VAMP4O75379 141 aa11.37□□□□□ -0.59
PPP4R3A-212ENST00000557382 HMOX1P09601 288 aa11.37□□□□□ -0.59
PPP4R3A-212ENST00000557382 FBLN1P23142 703 aa11.37□□□□□ -0.59
PPP4R3A-212ENST00000557382 SKAP1Q86WV1 359 aa11.37□□□□□ -0.59
PPP4R3A-212ENST00000557382 SLC26A8Q96RN1 970 aa11.37□□□□□ -0.59
PPP4R3A-212ENST00000557382 TNNQ9UQP3 1299 aa11.37□□□□□ -0.59
PPP4R3A-212ENST00000557382 ARHGEF10O15013 1369 aa11.37□□□□□ -0.59
PPP4R3A-212ENST00000557382 EIF4A2Q14240 407 aaKnown RBP11.36□□□□□ -0.59
PPP4R3A-212ENST00000557382 RRS1Q15050 365 aaKnown RBP11.36□□□□□ -0.59
PPP4R3A-212ENST00000557382 PDZRN3Q9UPQ7 1066 aa11.36□□□□□ -0.59
PPP4R3A-212ENST00000557382 SBNO1A3KN83 1393 aa11.36□□□□□ -0.59
PPP4R3A-212ENST00000557382 ITPRIPQ8IWB1 547 aa11.35□□□□□ -0.59
PPP4R3A-212ENST00000557382 SMC5Q8IY18 1101 aa11.35□□□□□ -0.59
PPP4R3A-212ENST00000557382 MRPL50Q8N5N7 158 aaKnown RBP11.35□□□□□ -0.59
PPP4R3A-212ENST00000557382 ZBTB40Q9NUA8 1239 aa11.35□□□□□ -0.59
PPP4R3A-212ENST00000557382 FLT4P35916 1363 aa11.34□□□□□ -0.59
PPP4R3A-212ENST00000557382 KIAA0232Q92628 1395 aa11.34□□□□□ -0.59
PPP4R3A-212ENST00000557382 TMEM57Q8N5G2 664 aa11.34□□□□□ -0.59
PPP4R3A-212ENST00000557382 MBIPQ9NS73 344 aa11.34□□□□□ -0.59
PPP4R3A-212ENST00000557382 USP35Q9P2H5 1018 aa11.34□□□□□ -0.59
PPP4R3A-212ENST00000557382 PIK3C2AO00443 1686 aa11.33□□□□□ -0.6
PPP4R3A-212ENST00000557382 API5Q9BZZ5 524 aaKnown RBP11.33□□□□□ -0.6
PPP4R3A-212ENST00000557382 KDRP35968 1356 aa11.32□□□□□ -0.6
PPP4R3A-212ENST00000557382 CAPN15O75808 1086 aa11.32□□□□□ -0.6
PPP4R3A-212ENST00000557382 TWISTNBQ3B726 338 aaPredicted RBP11.32□□□□□ -0.6
PPP4R3A-212ENST00000557382 NGDNQ8NEJ9 315 aaKnown RBP11.32□□□□□ -0.6
PPP4R3A-212ENST00000557382 LAS1LQ9Y4W2 734 aaKnown RBP11.32□□□□□ -0.6
PPP4R3A-212ENST00000557382 ADAMTSL3P82987 1691 aa11.32□□□□□ -0.6
PPP4R3A-212ENST00000557382 CACNA1FO60840 1977 aa11.32□□□□□ -0.6
PPP4R3A-212ENST00000557382 ABCC4O15439 1325 aa11.32□□□□□ -0.6
PPP4R3A-212ENST00000557382 MARF1Q9Y4F3 1742 aaKnown RBP11.32□□□□□ -0.6
PPP4R3A-212ENST00000557382 CHL1O00533 1208 aa11.31□□□□□ -0.6
PPP4R3A-212ENST00000557382 HTATSF1O43719 755 aaKnown RBP11.31□□□□□ -0.6
PPP4R3A-212ENST00000557382 SULT6B1Q6IMI4 303 aa11.31□□□□□ -0.6
PPP4R3A-212ENST00000557382 ANKLE2Q86XL3 938 aa11.31□□□□□ -0.6
PPP4R3A-212ENST00000557382 DAXXQ9UER7 740 aaPredicted RBP11.31□□□□□ -0.6
PPP4R3A-212ENST00000557382 GCC1Q96CN9 775 aa11.3□□□□□ -0.6
PPP4R3A-212ENST00000557382 UPF2Q9HAU5 1272 aaKnown RBP11.3□□□□□ -0.6
PPP4R3A-212ENST00000557382 MAP3K19Q56UN5 1328 aa11.3□□□□□ -0.6
PPP4R3A-212ENST00000557382 IGSF1Q8N6C5 1336 aa11.3□□□□□ -0.6
PPP4R3A-212ENST00000557382 RTL1A6NKG5 1358 aa11.29□□□□□ -0.6
PPP4R3A-212ENST00000557382 ZBTB7BO15156 539 aaPredicted RBP11.29□□□□□ -0.6
PPP4R3A-212ENST00000557382 KCNA6P17658 529 aa11.29□□□□□ -0.6
PPP4R3A-212ENST00000557382 HSP90AB2PQ58FF8 381 aa11.29□□□□□ -0.6
PPP4R3A-212ENST00000557382 RTL5Q5HYW3 569 aaPredicted RBP11.29□□□□□ -0.6
PPP4R3A-212ENST00000557382 TSPYL6Q8N831 410 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms