RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 MTMR14Q8NCE2 650 aa7.87□□□□□ -1.15
CHD8-212ENST00000557329 C1QTNF2Q9BXJ5 285 aa7.87□□□□□ -1.15
CHD8-212ENST00000557329 TRIM34Q9BYJ4 488 aa7.87□□□□□ -1.15
CHD8-212ENST00000557329 HMX1Q9NP08 348 aaPredicted RBP7.87□□□□□ -1.15
CHD8-212ENST00000557329 RAD21O60216 631 aa7.86□□□□□ -1.15
CHD8-212ENST00000557329 WASHC4Q2M389 1173 aa7.86□□□□□ -1.15
CHD8-212ENST00000557329 NBPF20Q3BBV1 942 aa7.86□□□□□ -1.15
CHD8-212ENST00000557329 TRIM46Q7Z4K8 759 aa7.86□□□□□ -1.15
CHD8-212ENST00000557329 FOXJ1Q92949 421 aa7.86□□□□□ -1.15
CHD8-212ENST00000557329 IRF7Q92985 503 aa7.86□□□□□ -1.15
CHD8-212ENST00000557329 SLC10A4Q96EP9 437 aa7.86□□□□□ -1.15
CHD8-212ENST00000557329 CAPN5O15484 640 aaPredicted RBP7.85□□□□□ -1.15
CHD8-212ENST00000557329 LORP23490 312 aaPredicted RBP7.85□□□□□ -1.15
CHD8-212ENST00000557329 GMPRP36959 345 aa7.85□□□□□ -1.15
CHD8-212ENST00000557329 MCM6Q14566 821 aa7.85□□□□□ -1.15
CHD8-212ENST00000557329 ZSCAN1Q8NBB4 408 aa7.85□□□□□ -1.15
CHD8-212ENST00000557329 SNRKQ9NRH2 765 aa7.85□□□□□ -1.15
CHD8-212ENST00000557329 MAGEB6P1A0A0J9YX57 407 aa7.84□□□□□ -1.15
CHD8-212ENST00000557329 ADH1CP00326 375 aa7.84□□□□□ -1.15
CHD8-212ENST00000557329 DHX9Q08211 1270 aaKnown RBP7.84□□□□□ -1.15
CHD8-212ENST00000557329 H3BM21 787 aa7.83□□□□□ -1.16
CHD8-212ENST00000557329 NR1H3Q13133 447 aa7.83□□□□□ -1.16
CHD8-212ENST00000557329 ERFEQ4G0M1 354 aa7.83□□□□□ -1.16
CHD8-212ENST00000557329 BMP1P13497 986 aa7.82□□□□□ -1.16
CHD8-212ENST00000557329 SOX11P35716 441 aa7.82□□□□□ -1.16
CHD8-212ENST00000557329 EIF4G2P78344 907 aaKnown RBP eCLIP7.82□□□□□ -1.16
CHD8-212ENST00000557329 VASH1Q7L8A9 365 aaPredicted RBP7.82□□□□□ -1.16
CHD8-212ENST00000557329 DZIP3Q86Y13 1208 aaKnown RBP7.82□□□□□ -1.16
CHD8-212ENST00000557329 SEPT12Q8IYM1 358 aa7.82□□□□□ -1.16
CHD8-212ENST00000557329 ADAM32Q8TC27 787 aa7.82□□□□□ -1.16
CHD8-212ENST00000557329 EPS8L1Q8TE68 723 aa7.82□□□□□ -1.16
CHD8-212ENST00000557329 UBTFP17480 764 aaKnown RBP7.81□□□□□ -1.16
CHD8-212ENST00000557329 RNF20Q5VTR2 975 aa7.81□□□□□ -1.16
CHD8-212ENST00000557329 CARD14Q9BXL6 1004 aa7.81□□□□□ -1.16
CHD8-212ENST00000557329 ARID5BQ14865 1188 aa7.8□□□□□ -1.16
CHD8-212ENST00000557329 C4orf48Q5BLP8 95 aa7.8□□□□□ -1.16
CHD8-212ENST00000557329 CCDC180Q9P1Z9 1646 aa7.79□□□□□ -1.16
CHD8-212ENST00000557329 PGPEP1Q9NXJ5 209 aa7.79□□□□□ -1.16
CHD8-212ENST00000557329 EMILIN1Q9Y6C2 1016 aa7.79□□□□□ -1.16
CHD8-212ENST00000557329 NNTQ13423 1086 aa7.78□□□□□ -1.16
CHD8-212ENST00000557329 ERICH6Q7L0X2 663 aa7.78□□□□□ -1.16
CHD8-212ENST00000557329 TLL2Q9Y6L7 1015 aa7.78□□□□□ -1.16
CHD8-212ENST00000557329 ERBB4Q15303 1308 aa7.78□□□□□ -1.16
CHD8-212ENST00000557329 FBXO45P0C2W1 286 aa7.77□□□□□ -1.17
CHD8-212ENST00000557329 CCDC116Q8IYX3 515 aa7.77□□□□□ -1.17
CHD8-212ENST00000557329 ZFP42Q96MM3 310 aa7.77□□□□□ -1.17
CHD8-212ENST00000557329 KCTD15Q96SI1 283 aaPredicted RBP7.77□□□□□ -1.17
CHD8-212ENST00000557329 TBC1D2BQ9UPU7 963 aa7.77□□□□□ -1.17
CHD8-212ENST00000557329 GRM5P41594 1212 aa7.76□□□□□ -1.17
CHD8-212ENST00000557329 VEGFBP49765 207 aa7.76□□□□□ -1.17
CHD8-212ENST00000557329 PCDHB9Q9Y5E1 797 aa7.76□□□□□ -1.17
CHD8-212ENST00000557329 LOC100996750A0A140TA64 210 aa7.75□□□□□ -1.17
CHD8-212ENST00000557329 FSHRP23945 695 aa7.75□□□□□ -1.17
CHD8-212ENST00000557329 ABL2P42684 1182 aa7.75□□□□□ -1.17
CHD8-212ENST00000557329 OCSTAMPQ9BR26 566 aa7.75□□□□□ -1.17
CHD8-212ENST00000557329 KRTAP4-6Q9BYQ5 205 aa7.75□□□□□ -1.17
CHD8-212ENST00000557329 GDPD2Q9HCC8 539 aa7.75□□□□□ -1.17
CHD8-212ENST00000557329 COG6Q9Y2V7 657 aa7.75□□□□□ -1.17
CHD8-212ENST00000557329 VSIG8P0DPA2 414 aa7.74□□□□□ -1.17
CHD8-212ENST00000557329 MRPL14Q6P1L8 145 aaKnown RBP7.74□□□□□ -1.17
CHD8-212ENST00000557329 ESPNB1AK53 854 aa7.73□□□□□ -1.17
CHD8-212ENST00000557329 UPP2O95045 317 aa7.73□□□□□ -1.17
CHD8-212ENST00000557329 A6NJR5 290 aa7.72□□□□□ -1.17
CHD8-212ENST00000557329 WDR4P57081 412 aaKnown RBP7.72□□□□□ -1.17
CHD8-212ENST00000557329 SEMA3FQ13275 785 aa7.72□□□□□ -1.17
CHD8-212ENST00000557329 SCARF1Q14162 830 aa7.72□□□□□ -1.17
CHD8-212ENST00000557329 GPR37L1O60883 481 aa7.71□□□□□ -1.18
CHD8-212ENST00000557329 ESF1Q9H501 851 aaKnown RBP7.71□□□□□ -1.18
CHD8-212ENST00000557329 TIMP2P16035 220 aa7.7□□□□□ -1.18
CHD8-212ENST00000557329 IRF5Q13568 498 aa7.7□□□□□ -1.18
CHD8-212ENST00000557329 INTS6LQ5JSJ4 861 aaKnown RBP7.7□□□□□ -1.18
CHD8-212ENST00000557329 SIRT1Q96EB6 747 aa7.7□□□□□ -1.18
CHD8-212ENST00000557329 KLF16Q9BXK1 252 aaPredicted RBP7.7□□□□□ -1.18
CHD8-212ENST00000557329 GTF3C3Q9Y5Q9 886 aa7.7□□□□□ -1.18
CHD8-212ENST00000557329 RB1CC1Q8TDY2 1594 aa7.7□□□□□ -1.18
CHD8-212ENST00000557329 LZTS3O60299 673 aaPredicted RBP7.69□□□□□ -1.18
CHD8-212ENST00000557329 ZIC2O95409 532 aaPredicted RBP7.69□□□□□ -1.18
CHD8-212ENST00000557329 PPP1R26Q5T8A7 1209 aaPredicted RBP7.69□□□□□ -1.18
CHD8-212ENST00000557329 MAP7D1Q3KQU3 841 aa7.68□□□□□ -1.18
CHD8-212ENST00000557329 SLFNL1Q499Z3 407 aa7.68□□□□□ -1.18
CHD8-212ENST00000557329 PURBQ96QR8 312 aaKnown RBP7.68□□□□□ -1.18
CHD8-212ENST00000557329 TSEN34Q9BSV6 310 aaKnown RBP7.68□□□□□ -1.18
CHD8-212ENST00000557329 CEP126Q9P2H0 1117 aa7.68□□□□□ -1.18
CHD8-212ENST00000557329 NR3C2P08235 984 aa7.67□□□□□ -1.18
CHD8-212ENST00000557329 VAC14Q08AM6 782 aa7.67□□□□□ -1.18
CHD8-212ENST00000557329 PROSER2Q86WR7 435 aaPredicted RBP7.67□□□□□ -1.18
CHD8-212ENST00000557329 Q6ZVU0 165 aa7.66□□□□□ -1.18
CHD8-212ENST00000557329 NFATC2IPQ8NCF5 419 aa7.66□□□□□ -1.18
CHD8-212ENST00000557329 ITPKCQ96DU7 683 aa7.66□□□□□ -1.18
CHD8-212ENST00000557329 ERVH48-1M5A8F1 160 aa7.65□□□□□ -1.18
CHD8-212ENST00000557329 GIGYF1O75420 1035 aaPredicted RBP7.65□□□□□ -1.18
CHD8-212ENST00000557329 MYCP01106 439 aaPredicted RBP7.65□□□□□ -1.18
CHD8-212ENST00000557329 KCNMA1Q12791 1236 aa7.65□□□□□ -1.18
CHD8-212ENST00000557329 MEIOBQ8N635 442 aa7.65□□□□□ -1.18
CHD8-212ENST00000557329 SOBPA7XYQ1 873 aa7.64□□□□□ -1.19
CHD8-212ENST00000557329 USP4Q13107 963 aa7.64□□□□□ -1.19
CHD8-212ENST00000557329 CC2D2BQ6DHV5 1058 aa7.64□□□□□ -1.19
CHD8-212ENST00000557329 CYP2U1Q7Z449 544 aa7.63□□□□□ -1.19
CHD8-212ENST00000557329 RNF135Q8IUD6 432 aa7.63□□□□□ -1.19
CHD8-212ENST00000557329 ALG2Q9H553 416 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms