RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.51■■□□□ 1.19
TUBB3-213ENST00000557262 TMC1Q8TDI8 760 aa22.51■■□□□ 1.19
TUBB3-213ENST00000557262 LRP5O75197 1615 aa22.5■■□□□ 1.19
TUBB3-213ENST00000557262 CDCA7Q9BWT1 371 aaPredicted RBP22.5■■□□□ 1.19
TUBB3-213ENST00000557262 CSB-PGBD3P0DP91 1061 aa22.49■■□□□ 1.19
TUBB3-213ENST00000557262 HDGFL2Q7Z4V5 671 aaPredicted RBP22.49■■□□□ 1.19
TUBB3-213ENST00000557262 PUS7Q96PZ0 661 aaKnown RBP22.49■■□□□ 1.19
TUBB3-213ENST00000557262 SLC12A5Q9H2X9 1139 aa22.49■■□□□ 1.19
TUBB3-213ENST00000557262 PARP4Q9UKK3 1724 aaKnown RBP22.48■■□□□ 1.19
TUBB3-213ENST00000557262 TRIM26Q12899 539 aaPredicted RBP22.48■■□□□ 1.19
TUBB3-213ENST00000557262 CARD10Q9BWT7 1032 aa22.48■■□□□ 1.19
TUBB3-213ENST00000557262 USP31Q70CQ4 1352 aa22.47■■□□□ 1.19
TUBB3-213ENST00000557262 NME9Q86XW9 330 aa22.46■■□□□ 1.19
TUBB3-213ENST00000557262 TERF2IPQ9NYB0 399 aa22.46■■□□□ 1.19
TUBB3-213ENST00000557262 NBPF14Q5TI25 921 aa22.45■■□□□ 1.18
TUBB3-213ENST00000557262 OVOS2A0A0G2JMS6 1433 aa22.45■■□□□ 1.18
TUBB3-213ENST00000557262 OVOS2A0A0J9YW53 1432 aa22.45■■□□□ 1.18
TUBB3-213ENST00000557262 OVOS2Q6IE36 1432 aa22.45■■□□□ 1.18
TUBB3-213ENST00000557262 CD163L1Q9NR16 1453 aa22.45■■□□□ 1.18
TUBB3-213ENST00000557262 NFAT5O94916 1531 aa22.43■■□□□ 1.18
TUBB3-213ENST00000557262 SLC24A1O60721 1099 aa22.43■■□□□ 1.18
TUBB3-213ENST00000557262 MARCH10Q8NA82 808 aaPredicted RBP22.43■■□□□ 1.18
TUBB3-213ENST00000557262 MON2Q7Z3U7 1717 aa22.43■■□□□ 1.18
TUBB3-213ENST00000557262 ST20-MTHFSA0A0A6YYL1 179 aa22.42■■□□□ 1.18
TUBB3-213ENST00000557262 EXOC5O00471 708 aa22.42■■□□□ 1.18
TUBB3-213ENST00000557262 RGPD5Q99666 1765 aa22.41■■□□□ 1.18
TUBB3-213ENST00000557262 PLSCR1O15162 318 aa22.41■■□□□ 1.18
TUBB3-213ENST00000557262 TESK2Q96S53 571 aa22.41■■□□□ 1.18
TUBB3-213ENST00000557262 BCL11BQ9C0K0 894 aaPredicted RBP22.41■■□□□ 1.18
TUBB3-213ENST00000557262 LRRC37A3O60309 1634 aa22.41■■□□□ 1.18
TUBB3-213ENST00000557262 CCDC7Q96M83 1385 aa22.4■■□□□ 1.18
TUBB3-213ENST00000557262 RREB1Q92766 1687 aa22.4■■□□□ 1.18
TUBB3-213ENST00000557262 PEAK1Q9H792 1746 aa22.4■■□□□ 1.18
TUBB3-213ENST00000557262 EDC4Q6P2E9 1401 aaKnown RBP22.4■■□□□ 1.18
TUBB3-213ENST00000557262 ABCC6O95255 1503 aa22.38■■□□□ 1.17
TUBB3-213ENST00000557262 A0A1W2PP64 1363 aa22.38■■□□□ 1.17
TUBB3-213ENST00000557262 NLRP2Q9NX02 1062 aa22.37■■□□□ 1.17
TUBB3-213ENST00000557262 BCL9O00512 1426 aa22.37■■□□□ 1.17
TUBB3-213ENST00000557262 NUP188Q5SRE5 1749 aa22.37■■□□□ 1.17
TUBB3-213ENST00000557262 WNK3Q9BYP7 1800 aa22.36■■□□□ 1.17
TUBB3-213ENST00000557262 PTF1AQ7RTS3 328 aa22.36■■□□□ 1.17
TUBB3-213ENST00000557262 ERBB3P21860 1342 aa22.35■■□□□ 1.17
TUBB3-213ENST00000557262 NINLQ9Y2I6 1382 aa22.35■■□□□ 1.17
TUBB3-213ENST00000557262 SBF2Q86WG5 1849 aa22.34■■□□□ 1.17
TUBB3-213ENST00000557262 USP54Q70EL1 1684 aa22.34■■□□□ 1.17
TUBB3-213ENST00000557262 ANKRD24Q8TF21 1146 aa22.34■■□□□ 1.17
TUBB3-213ENST00000557262 IL2RBP14784 551 aa22.31■■□□□ 1.16
TUBB3-213ENST00000557262 PROM2Q8N271 834 aa22.31■■□□□ 1.16
TUBB3-213ENST00000557262 IP6K1Q92551 441 aa22.31■■□□□ 1.16
TUBB3-213ENST00000557262 COG3Q96JB2 828 aa22.3■■□□□ 1.16
TUBB3-213ENST00000557262 TMF1P82094 1093 aa22.29■■□□□ 1.16
TUBB3-213ENST00000557262 RGPD3A6NKT7 1758 aaPredicted RBP22.28■■□□□ 1.16
TUBB3-213ENST00000557262 RGPD4Q7Z3J3 1758 aa22.28■■□□□ 1.16
TUBB3-213ENST00000557262 SPON1Q9HCB6 807 aa22.28■■□□□ 1.16
TUBB3-213ENST00000557262 LTN1O94822 1766 aa22.27■■□□□ 1.16
TUBB3-213ENST00000557262 KCNQ2O43526 872 aa22.27■■□□□ 1.16
TUBB3-213ENST00000557262 TNS2Q63HR2 1409 aa22.27■■□□□ 1.16
TUBB3-213ENST00000557262 TXNRD1Q16881 649 aa22.26■■□□□ 1.15
TUBB3-213ENST00000557262 LTV1Q96GA3 475 aaPredicted RBP22.25■■□□□ 1.15
TUBB3-213ENST00000557262 ANKRD36BQ8N2N9 1353 aa22.25■■□□□ 1.15
TUBB3-213ENST00000557262 USP47Q96K76 1375 aa22.25■■□□□ 1.15
TUBB3-213ENST00000557262 ACSBG1Q96GR2 724 aa22.24■■□□□ 1.15
TUBB3-213ENST00000557262 ANO8Q9HCE9 1232 aaPredicted RBP22.24■■□□□ 1.15
TUBB3-213ENST00000557262 FBLN1P23142 703 aa22.23■■□□□ 1.15
TUBB3-213ENST00000557262 AMPHP49418 695 aa22.23■■□□□ 1.15
TUBB3-213ENST00000557262 CDCA8Q53HL2 280 aa22.23■■□□□ 1.15
TUBB3-213ENST00000557262 TIMELESSQ9UNS1 1208 aa22.23■■□□□ 1.15
TUBB3-213ENST00000557262 MAP3K19Q56UN5 1328 aa22.23■■□□□ 1.15
TUBB3-213ENST00000557262 FYB1O15117 783 aa22.22■■□□□ 1.15
TUBB3-213ENST00000557262 HOXC9P31274 260 aa22.22■■□□□ 1.15
TUBB3-213ENST00000557262 PPP1R1BQ9UD71 204 aaPredicted RBP22.21■■□□□ 1.15
TUBB3-213ENST00000557262 STK32BQ9NY57 414 aa22.2■■□□□ 1.14
TUBB3-213ENST00000557262 SLC15A2Q16348 729 aa22.19■■□□□ 1.14
TUBB3-213ENST00000557262 DDX54Q8TDD1 881 aaKnown RBP22.19■■□□□ 1.14
TUBB3-213ENST00000557262 GGNBP2Q9H3C7 697 aa22.19■■□□□ 1.14
TUBB3-213ENST00000557262 RRS1Q15050 365 aaKnown RBP22.16■■□□□ 1.14
TUBB3-213ENST00000557262 PDGFDQ9GZP0 370 aaPredicted RBP22.16■■□□□ 1.14
TUBB3-213ENST00000557262 NHSQ6T4R5 1651 aa22.15■■□□□ 1.14
TUBB3-213ENST00000557262 CLSPNQ9HAW4 1339 aa22.14■■□□□ 1.14
TUBB3-213ENST00000557262 PCGF6Q9BYE7 350 aa22.14■■□□□ 1.13
TUBB3-213ENST00000557262 ZBTB7AO95365 584 aa22.13■■□□□ 1.13
TUBB3-213ENST00000557262 ZCRB1Q8TBF4 217 aaKnown RBP22.13■■□□□ 1.13
TUBB3-213ENST00000557262 RTL1A6NKG5 1358 aa22.12■■□□□ 1.13
TUBB3-213ENST00000557262 CASZ1Q86V15 1759 aa22.12■■□□□ 1.13
TUBB3-213ENST00000557262 FAM208AQ9UK61 1670 aaKnown RBP22.12■■□□□ 1.13
TUBB3-213ENST00000557262 KAT6BQ8WYB5 2073 aa22.11■■□□□ 1.13
TUBB3-213ENST00000557262 NBPF6Q5VWK0 638 aa22.11■■□□□ 1.13
TUBB3-213ENST00000557262 NBPF4Q96M43 638 aa22.11■■□□□ 1.13
TUBB3-213ENST00000557262 CARD14Q9BXL6 1004 aa22.11■■□□□ 1.13
TUBB3-213ENST00000557262 ATF5Q9Y2D1 282 aaPredicted RBP22.11■■□□□ 1.13
TUBB3-213ENST00000557262 DCAF8L1A6NGE4 600 aa22.09■■□□□ 1.13
TUBB3-213ENST00000557262 PTGER2P43116 358 aa22.09■■□□□ 1.13
TUBB3-213ENST00000557262 PRIM1P49642 420 aaKnown RBP22.09■■□□□ 1.13
TUBB3-213ENST00000557262 LRRC4BQ9NT99 713 aa22.08■■□□□ 1.13
TUBB3-213ENST00000557262 BTAF1O14981 1849 aa22.08■■□□□ 1.12
TUBB3-213ENST00000557262 CGNL1Q0VF96 1302 aa22.07■■□□□ 1.12
TUBB3-213ENST00000557262 HSP90AB2PQ58FF8 381 aa22.07■■□□□ 1.12
TUBB3-213ENST00000557262 SLC27A3Q5K4L6 730 aa22.07■■□□□ 1.12
TUBB3-213ENST00000557262 SYTL4Q96C24 671 aaPredicted RBP22.07■■□□□ 1.12
TUBB3-213ENST00000557262 MTFR1LQ9H019 292 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms