RNA–Protein interactions for RNA: ENST00000556886.1

LINC00871-204, long intergenic non-protein coding RNA 871, humanhuman

TSL 3 BASIC

Gene LINC00871, Length 866 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00871-204ENST00000556886 KCTD15Q96SI1 283 aaPredicted RBP11.87□□□□□ -0.51
LINC00871-204ENST00000556886 CDV3Q9UKY7 258 aaKnown RBP11.87□□□□□ -0.51
LINC00871-204ENST00000556886 ZNF777Q9ULD5 760 aaPredicted RBP11.87□□□□□ -0.51
LINC00871-204ENST00000556886 SMPD1P17405 629 aa11.86□□□□□ -0.51
LINC00871-204ENST00000556886 FSHRP23945 695 aa11.86□□□□□ -0.51
LINC00871-204ENST00000556886 SOX11P35716 441 aa11.86□□□□□ -0.51
LINC00871-204ENST00000556886 SEMA3FQ13275 785 aa11.86□□□□□ -0.51
LINC00871-204ENST00000556886 NBPF20Q3BBV1 942 aa11.86□□□□□ -0.51
LINC00871-204ENST00000556886 ALG2Q9H553 416 aa11.86□□□□□ -0.51
LINC00871-204ENST00000556886 MCCD1P59942 119 aaPredicted RBP11.85□□□□□ -0.51
LINC00871-204ENST00000556886 ZNF592Q92610 1267 aa11.85□□□□□ -0.51
LINC00871-204ENST00000556886 WASF2Q9Y6W5 498 aa11.85□□□□□ -0.51
LINC00871-204ENST00000556886 GIGYF1O75420 1035 aaPredicted RBP11.84□□□□□ -0.51
LINC00871-204ENST00000556886 LAPTM4AQ15012 233 aa11.84□□□□□ -0.51
LINC00871-204ENST00000556886 HDGFL1Q5TGJ6 251 aa11.84□□□□□ -0.51
LINC00871-204ENST00000556886 CEP126Q9P2H0 1117 aa11.84□□□□□ -0.51
LINC00871-204ENST00000556886 NRG2O14511 850 aaPredicted RBP11.83□□□□□ -0.52
LINC00871-204ENST00000556886 INTS6LQ5JSJ4 861 aaKnown RBP11.83□□□□□ -0.52
LINC00871-204ENST00000556886 GLMNQ92990 594 aa11.83□□□□□ -0.52
LINC00871-204ENST00000556886 FAM187AA6NFU0 413 aa11.82□□□□□ -0.52
LINC00871-204ENST00000556886 ESPNB1AK53 854 aa11.82□□□□□ -0.52
LINC00871-204ENST00000556886 NR3C2P08235 984 aa11.82□□□□□ -0.52
LINC00871-204ENST00000556886 RAB15P59190 212 aa11.82□□□□□ -0.52
LINC00871-204ENST00000556886 NR5A1Q13285 461 aa11.82□□□□□ -0.52
LINC00871-204ENST00000556886 NNTQ13423 1086 aa11.82□□□□□ -0.52
LINC00871-204ENST00000556886 ARID3CA6NKF2 412 aa11.8□□□□□ -0.52
LINC00871-204ENST00000556886 HPS1Q92902 700 aa11.8□□□□□ -0.52
LINC00871-204ENST00000556886 CALR3Q96L12 384 aaKnown RBP11.79□□□□□ -0.52
LINC00871-204ENST00000556886 SEPT12Q8IYM1 358 aa11.78□□□□□ -0.52
LINC00871-204ENST00000556886 CCDC116Q8IYX3 515 aa11.78□□□□□ -0.52
LINC00871-204ENST00000556886 PIK3CDO00329 1044 aa11.77□□□□□ -0.53
LINC00871-204ENST00000556886 SLFNL1Q499Z3 407 aa11.77□□□□□ -0.53
LINC00871-204ENST00000556886 PHTF2Q8N3S3 785 aa11.77□□□□□ -0.53
LINC00871-204ENST00000556886 ERVH48-1M5A8F1 160 aa11.76□□□□□ -0.53
LINC00871-204ENST00000556886 PKDCCQ504Y2 493 aa11.76□□□□□ -0.53
LINC00871-204ENST00000556886 UCN2Q96RP3 112 aa11.76□□□□□ -0.53
LINC00871-204ENST00000556886 PPP1R26Q5T8A7 1209 aaPredicted RBP11.75□□□□□ -0.53
LINC00871-204ENST00000556886 RNF20Q5VTR2 975 aa11.75□□□□□ -0.53
LINC00871-204ENST00000556886 RNF135Q8IUD6 432 aa11.75□□□□□ -0.53
LINC00871-204ENST00000556886 CCDC85AQ96PX6 553 aaPredicted RBP11.75□□□□□ -0.53
LINC00871-204ENST00000556886 SUPT5HO00267 1087 aaKnown RBP11.74□□□□□ -0.53
LINC00871-204ENST00000556886 DGAT1O75907 488 aa11.74□□□□□ -0.53
LINC00871-204ENST00000556886 KLF16Q9BXK1 252 aaPredicted RBP11.74□□□□□ -0.53
LINC00871-204ENST00000556886 C1orf115Q9H7X2 142 aa11.74□□□□□ -0.53
LINC00871-204ENST00000556886 TMPRSS4Q9NRS4 437 aa11.74□□□□□ -0.53
LINC00871-204ENST00000556886 WDR4P57081 412 aaKnown RBP11.73□□□□□ -0.53
LINC00871-204ENST00000556886 DHX9Q08211 1270 aaKnown RBP11.73□□□□□ -0.53
LINC00871-204ENST00000556886 TSGA10IPQ3SY00 556 aa11.73□□□□□ -0.53
LINC00871-204ENST00000556886 AVPP01185 164 aa11.72□□□□□ -0.53
LINC00871-204ENST00000556886 ITPKCQ96DU7 683 aa11.72□□□□□ -0.53
LINC00871-204ENST00000556886 PCDHB11Q9Y5F2 797 aa11.72□□□□□ -0.53
LINC00871-204ENST00000556886 EMILIN1Q9Y6C2 1016 aa11.72□□□□□ -0.53
LINC00871-204ENST00000556886 ZIC2O95409 532 aaPredicted RBP11.71□□□□□ -0.53
LINC00871-204ENST00000556886 TIMP2P16035 220 aa11.71□□□□□ -0.53
LINC00871-204ENST00000556886 ZFAND3Q9H8U3 227 aa11.71□□□□□ -0.53
LINC00871-204ENST00000556886 CHIC2Q9UKJ5 165 aa11.71□□□□□ -0.53
LINC00871-204ENST00000556886 SKIP12755 728 aa11.7□□□□□ -0.54
LINC00871-204ENST00000556886 TBC1D9Q6ZT07 1266 aa11.7□□□□□ -0.54
LINC00871-204ENST00000556886 PLPP7Q8NBV4 271 aa11.7□□□□□ -0.54
LINC00871-204ENST00000556886 ZNF784Q8NCA9 323 aaPredicted RBP11.7□□□□□ -0.54
LINC00871-204ENST00000556886 CDCA7Q9BWT1 371 aaPredicted RBP11.7□□□□□ -0.54
LINC00871-204ENST00000556886 CCDC125Q86Z20 511 aa11.69□□□□□ -0.54
LINC00871-204ENST00000556886 PGPEP1Q9NXJ5 209 aa11.69□□□□□ -0.54
LINC00871-204ENST00000556886 DOLKQ9UPQ8 538 aa11.69□□□□□ -0.54
LINC00871-204ENST00000556886 TRAF7Q6Q0C0 670 aa11.68□□□□□ -0.54
LINC00871-204ENST00000556886 NFATC2IPQ8NCF5 419 aa11.68□□□□□ -0.54
LINC00871-204ENST00000556886 CYLDQ9NQC7 956 aa11.68□□□□□ -0.54
LINC00871-204ENST00000556886 SCTRP47872 440 aa11.67□□□□□ -0.54
LINC00871-204ENST00000556886 MYT1Q01538 1121 aa11.67□□□□□ -0.54
LINC00871-204ENST00000556886 CAPN5O15484 640 aaPredicted RBP11.66□□□□□ -0.54
LINC00871-204ENST00000556886 ATP9BO43861 1147 aa11.66□□□□□ -0.54
LINC00871-204ENST00000556886 LILRA1O75019 489 aa11.66□□□□□ -0.54
LINC00871-204ENST00000556886 OXLD1Q5BKU9 147 aa11.66□□□□□ -0.54
LINC00871-204ENST00000556886 PPP1R12CQ9BZL4 782 aa11.66□□□□□ -0.54
LINC00871-204ENST00000556886 TFIP11Q9UBB9 837 aaKnown RBP11.66□□□□□ -0.54
LINC00871-204ENST00000556886 PALM3A6NDB9 673 aaPredicted RBP11.65□□□□□ -0.54
LINC00871-204ENST00000556886 USP17L5A8MUK1 530 aa11.65□□□□□ -0.54
LINC00871-204ENST00000556886 CBLBQ13191 982 aa11.65□□□□□ -0.54
LINC00871-204ENST00000556886 CTC1Q2NKJ3 1217 aa11.65□□□□□ -0.54
LINC00871-204ENST00000556886 MAP7D1Q3KQU3 841 aa11.65□□□□□ -0.54
LINC00871-204ENST00000556886 CCDC82Q8N4S0 544 aa11.65□□□□□ -0.54
LINC00871-204ENST00000556886 AXIN1O15169 862 aa11.64□□□□□ -0.55
LINC00871-204ENST00000556886 ST8SIA5O15466 376 aa11.64□□□□□ -0.55
LINC00871-204ENST00000556886 SMCPP49901 116 aaPredicted RBP11.64□□□□□ -0.55
LINC00871-204ENST00000556886 ERVK-9P63128 1117 aa11.64□□□□□ -0.55
LINC00871-204ENST00000556886 DEPDC4Q8N2C3 294 aa11.64□□□□□ -0.55
LINC00871-204ENST00000556886 ADD1P35611 737 aaKnown RBP11.63□□□□□ -0.55
LINC00871-204ENST00000556886 NCOA4Q13772 614 aa11.63□□□□□ -0.55
LINC00871-204ENST00000556886 CC2D2BQ6DHV5 1058 aa11.63□□□□□ -0.55
LINC00871-204ENST00000556886 CRIPAKQ8N1N5 446 aa11.63□□□□□ -0.55
LINC00871-204ENST00000556886 CCDC97Q96F63 343 aaPredicted RBP11.63□□□□□ -0.55
LINC00871-204ENST00000556886 AAASQ9NRG9 546 aa11.63□□□□□ -0.55
LINC00871-204ENST00000556886 MAFBQ9Y5Q3 323 aaPredicted RBP11.63□□□□□ -0.55
LINC00871-204ENST00000556886 USP17L3A6NCW0 530 aa11.62□□□□□ -0.55
LINC00871-204ENST00000556886 USP17L4A6NCW7 530 aa11.62□□□□□ -0.55
LINC00871-204ENST00000556886 LCE2BO14633 110 aa11.62□□□□□ -0.55
LINC00871-204ENST00000556886 USP17L2Q6R6M4 530 aa11.62□□□□□ -0.55
LINC00871-204ENST00000556886 USP17L1Q7RTZ2 530 aa11.62□□□□□ -0.55
LINC00871-204ENST00000556886 CFAP70Q5T0N1 1121 aa11.61□□□□□ -0.55
LINC00871-204ENST00000556886 Q6ZVU0 165 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms