RNA–Protein interactions for RNA: ENST00000556846.1

PCNX1-213, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 506 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-213ENST00000556846 ZC3H6P61129 1189 aaKnown RBP10.26□□□□□ -0.77
PCNX1-213ENST00000556846 SF3B2Q13435 895 aaKnown RBP10.26□□□□□ -0.77
PCNX1-213ENST00000556846 ABTB2Q8N961 1025 aa10.26□□□□□ -0.77
PCNX1-213ENST00000556846 USP32Q8NFA0 1604 aa10.25□□□□□ -0.77
PCNX1-213ENST00000556846 ST18O60284 1047 aa10.25□□□□□ -0.77
PCNX1-213ENST00000556846 EVA1CP58658 441 aa10.25□□□□□ -0.77
PCNX1-213ENST00000556846 FAM98CQ17RN3 349 aaKnown RBP10.25□□□□□ -0.77
PCNX1-213ENST00000556846 RASEFQ8IZ41 740 aa10.25□□□□□ -0.77
PCNX1-213ENST00000556846 CHRNA2Q15822 529 aa10.24□□□□□ -0.77
PCNX1-213ENST00000556846 KRT27Q7Z3Y8 459 aa10.24□□□□□ -0.77
PCNX1-213ENST00000556846 NLRP13Q86W25 1043 aa10.24□□□□□ -0.77
PCNX1-213ENST00000556846 STRN4Q9NRL3 753 aa10.24□□□□□ -0.77
PCNX1-213ENST00000556846 CABP1Q9NZU7 370 aa10.24□□□□□ -0.77
PCNX1-213ENST00000556846 ROCK2O75116 1388 aaKnown RBP10.24□□□□□ -0.77
PCNX1-213ENST00000556846 ATP7BP35670 1465 aa10.23□□□□□ -0.77
PCNX1-213ENST00000556846 ZBTB7CA1YPR0 619 aa10.23□□□□□ -0.77
PCNX1-213ENST00000556846 ONECUT3O60422 494 aaPredicted RBP10.23□□□□□ -0.77
PCNX1-213ENST00000556846 IER5LQ5T953 404 aa10.23□□□□□ -0.77
PCNX1-213ENST00000556846 EVC2Q86UK5 1308 aa10.23□□□□□ -0.77
PCNX1-213ENST00000556846 SEC24BO95487 1268 aa10.22□□□□□ -0.77
PCNX1-213ENST00000556846 SGIP1Q9BQI5 828 aa10.22□□□□□ -0.77
PCNX1-213ENST00000556846 USP35Q9P2H5 1018 aa10.22□□□□□ -0.77
PCNX1-213ENST00000556846 POLR3AO14802 1390 aaPredicted RBP10.22□□□□□ -0.77
PCNX1-213ENST00000556846 KIAA0232Q92628 1395 aa10.22□□□□□ -0.77
PCNX1-213ENST00000556846 PPIP5K1Q6PFW1 1433 aa10.22□□□□□ -0.77
PCNX1-213ENST00000556846 ARHGEF28Q8N1W1 1705 aaKnown RBP10.21□□□□□ -0.77
PCNX1-213ENST00000556846 MARF1Q9Y4F3 1742 aaKnown RBP10.21□□□□□ -0.77
PCNX1-213ENST00000556846 GCP02774 474 aa10.2□□□□□ -0.78
PCNX1-213ENST00000556846 GLI3P10071 1580 aa10.2□□□□□ -0.78
PCNX1-213ENST00000556846 NLRP6P59044 892 aa10.2□□□□□ -0.78
PCNX1-213ENST00000556846 TRIM26Q12899 539 aaPredicted RBP10.2□□□□□ -0.78
PCNX1-213ENST00000556846 SPATA31A5Q5VU36 1347 aa10.2□□□□□ -0.78
PCNX1-213ENST00000556846 SPATA31A7Q8IWB4 1347 aa10.2□□□□□ -0.78
PCNX1-213ENST00000556846 TONSLQ96HA7 1378 aa10.2□□□□□ -0.78
PCNX1-213ENST00000556846 CARD11Q9BXL7 1154 aa10.2□□□□□ -0.78
PCNX1-213ENST00000556846 KIAA1210Q9ULL0 1709 aa10.2□□□□□ -0.78
PCNX1-213ENST00000556846 BLMP54132 1417 aaPredicted RBP10.19□□□□□ -0.78
PCNX1-213ENST00000556846 DEFB132Q7Z7B7 95 aa10.19□□□□□ -0.78
PCNX1-213ENST00000556846 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.19□□□□□ -0.78
PCNX1-213ENST00000556846 TRPM3Q9HCF6 1732 aaPredicted RBP10.19□□□□□ -0.78
PCNX1-213ENST00000556846 FAM182BQ5T319 152 aa10.18□□□□□ -0.78
PCNX1-213ENST00000556846 TRIM35Q9UPQ4 493 aa10.18□□□□□ -0.78
PCNX1-213ENST00000556846 BRD4O60885 1362 aaPredicted RBP10.17□□□□□ -0.78
PCNX1-213ENST00000556846 SPATA31A1Q5TZJ5 1347 aa10.17□□□□□ -0.78
PCNX1-213ENST00000556846 ITSN1Q15811 1721 aa10.17□□□□□ -0.78
PCNX1-213ENST00000556846 BAG6P46379 1132 aa10.17□□□□□ -0.78
PCNX1-213ENST00000556846 PDE3BQ13370 1112 aa10.17□□□□□ -0.78
PCNX1-213ENST00000556846 PLCH1Q4KWH8 1693 aa10.17□□□□□ -0.78
PCNX1-213ENST00000556846 ALS2Q96Q42 1657 aa10.17□□□□□ -0.78
PCNX1-213ENST00000556846 COL14A1Q05707 1796 aaKnown RBP10.16□□□□□ -0.78
PCNX1-213ENST00000556846 NWD2Q9ULI1 1742 aa10.16□□□□□ -0.78
PCNX1-213ENST00000556846 SOX12O15370 315 aa10.16□□□□□ -0.78
PCNX1-213ENST00000556846 LARP1Q6PKG0 1096 aaKnown RBP10.16□□□□□ -0.78
PCNX1-213ENST00000556846 MIER1Q8N108 512 aa10.16□□□□□ -0.78
PCNX1-213ENST00000556846 TMC1Q8TDI8 760 aa10.16□□□□□ -0.78
PCNX1-213ENST00000556846 ABCA3Q99758 1704 aa10.16□□□□□ -0.78
PCNX1-213ENST00000556846 USP19O94966 1318 aa10.15□□□□□ -0.78
PCNX1-213ENST00000556846 TCP11L2Q8N4U5 519 aa10.15□□□□□ -0.78
PCNX1-213ENST00000556846 USP6P35125 1406 aa10.15□□□□□ -0.79
PCNX1-213ENST00000556846 TTC21BQ7Z4L5 1316 aa10.14□□□□□ -0.79
PCNX1-213ENST00000556846 FAM196AQ6ZSG2 479 aa10.14□□□□□ -0.79
PCNX1-213ENST00000556846 BARGINQ6ZT62 677 aa10.14□□□□□ -0.79
PCNX1-213ENST00000556846 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.14□□□□□ -0.79
PCNX1-213ENST00000556846 KCNH5Q8NCM2 988 aa10.14□□□□□ -0.79
PCNX1-213ENST00000556846 CPDO75976 1380 aa10.14□□□□□ -0.79
PCNX1-213ENST00000556846 KTN1Q86UP2 1357 aaKnown RBP10.14□□□□□ -0.79
PCNX1-213ENST00000556846 QRICH2Q9H0J4 1663 aa10.13□□□□□ -0.79
PCNX1-213ENST00000556846 CSB-PGBD3P0DP91 1061 aa10.13□□□□□ -0.79
PCNX1-213ENST00000556846 EN1Q05925 392 aaPredicted RBP10.13□□□□□ -0.79
PCNX1-213ENST00000556846 TOM1L2Q6ZVM7 507 aa10.13□□□□□ -0.79
PCNX1-213ENST00000556846 HDGFL2Q7Z4V5 671 aaPredicted RBP10.13□□□□□ -0.79
PCNX1-213ENST00000556846 PCDHB13Q9Y5F0 798 aa10.13□□□□□ -0.79
PCNX1-213ENST00000556846 SSH2Q76I76 1423 aa10.13□□□□□ -0.79
PCNX1-213ENST00000556846 TOPAZ1Q8N9V7 1692 aa10.12□□□□□ -0.79
PCNX1-213ENST00000556846 TRPM1Q7Z4N2 1603 aa10.12□□□□□ -0.79
PCNX1-213ENST00000556846 TRIM37O94972 964 aa10.12□□□□□ -0.79
PCNX1-213ENST00000556846 SLAIN1Q8ND83 568 aa10.12□□□□□ -0.79
PCNX1-213ENST00000556846 THRAP3Q9Y2W1 955 aaKnown RBP10.12□□□□□ -0.79
PCNX1-213ENST00000556846 TTC21AQ8NDW8 1320 aa10.11□□□□□ -0.79
PCNX1-213ENST00000556846 APBA3O96018 575 aa10.11□□□□□ -0.79
PCNX1-213ENST00000556846 SLC12A5Q9H2X9 1139 aa10.11□□□□□ -0.79
PCNX1-213ENST00000556846 TERF2IPQ9NYB0 399 aa10.11□□□□□ -0.79
PCNX1-213ENST00000556846 CAMTA1Q9Y6Y1 1673 aa10.11□□□□□ -0.79
PCNX1-213ENST00000556846 NRAPQ86VF7 1730 aa10.1□□□□□ -0.79
PCNX1-213ENST00000556846 SLC24A1O60721 1099 aa10.1□□□□□ -0.79
PCNX1-213ENST00000556846 AATKQ6ZMQ8 1374 aa10.1□□□□□ -0.79
PCNX1-213ENST00000556846 PHRF1Q9P1Y6 1649 aaKnown RBP10.1□□□□□ -0.79
PCNX1-213ENST00000556846 BRWD3Q6RI45 1802 aa10.1□□□□□ -0.79
PCNX1-213ENST00000556846 CRB1P82279 1406 aa10.09□□□□□ -0.79
PCNX1-213ENST00000556846 ST20-MTHFSA0A0A6YYL1 179 aa10.09□□□□□ -0.79
PCNX1-213ENST00000556846 PSDA5PKW4 1024 aaPredicted RBP10.09□□□□□ -0.79
PCNX1-213ENST00000556846 EZH2Q15910 746 aaKnown RBP10.09□□□□□ -0.79
PCNX1-213ENST00000556846 ARHGEF25Q86VW2 580 aa10.09□□□□□ -0.79
PCNX1-213ENST00000556846 PCGF6Q9BYE7 350 aa10.09□□□□□ -0.79
PCNX1-213ENST00000556846 AXIN2Q9Y2T1 843 aa10.09□□□□□ -0.79
PCNX1-213ENST00000556846 CRYBG1Q9Y4K1 1723 aa10.09□□□□□ -0.79
PCNX1-213ENST00000556846 NRKQ7Z2Y5 1582 aa10.09□□□□□ -0.79
PCNX1-213ENST00000556846 CPSF1Q10570 1443 aaKnown RBP10.08□□□□□ -0.8
PCNX1-213ENST00000556846 C11orf95C9JLR9 678 aaPredicted RBP10.08□□□□□ -0.8
PCNX1-213ENST00000556846 NUBP1P53384 320 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms