RNA–Protein interactions for RNA: ENST00000556790.1

LGMN-213, Transcript of legumain, humanhuman

TSL 2

Gene LGMN, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGMN-213ENST00000556790 ARHGEF25Q86VW2 580 aa8.97□□□□□ -0.97
LGMN-213ENST00000556790 TCP11L2Q8N4U5 519 aa8.97□□□□□ -0.97
LGMN-213ENST00000556790 USP47Q96K76 1375 aa8.97□□□□□ -0.97
LGMN-213ENST00000556790 PARP4Q9UKK3 1724 aaKnown RBP8.97□□□□□ -0.97
LGMN-213ENST00000556790 RGPD2P0DJD1 1756 aa8.96□□□□□ -0.97
LGMN-213ENST00000556790 ZNF692Q9BU19 519 aaPredicted RBP8.96□□□□□ -0.98
LGMN-213ENST00000556790 AATKQ6ZMQ8 1374 aa8.96□□□□□ -0.98
LGMN-213ENST00000556790 CRB1P82279 1406 aa8.96□□□□□ -0.98
LGMN-213ENST00000556790 APBA3O96018 575 aa8.95□□□□□ -0.98
LGMN-213ENST00000556790 CSB-PGBD3P0DP91 1061 aa8.95□□□□□ -0.98
LGMN-213ENST00000556790 PDE3BQ13370 1112 aa8.95□□□□□ -0.98
LGMN-213ENST00000556790 HDGFL2Q7Z4V5 671 aaPredicted RBP8.95□□□□□ -0.98
LGMN-213ENST00000556790 CCDC125Q86Z20 511 aa8.95□□□□□ -0.98
LGMN-213ENST00000556790 LTV1Q96GA3 475 aaPredicted RBP8.95□□□□□ -0.98
LGMN-213ENST00000556790 SBF2Q86WG5 1849 aa8.95□□□□□ -0.98
LGMN-213ENST00000556790 TTC21AQ8NDW8 1320 aa8.95□□□□□ -0.98
LGMN-213ENST00000556790 MYOM1P52179 1685 aa8.94□□□□□ -0.98
LGMN-213ENST00000556790 PEAK1Q9H792 1746 aa8.94□□□□□ -0.98
LGMN-213ENST00000556790 BAG6P46379 1132 aa8.94□□□□□ -0.98
LGMN-213ENST00000556790 R3HDM1Q15032 1099 aaKnown RBP8.94□□□□□ -0.98
LGMN-213ENST00000556790 BARGINQ6ZT62 677 aa8.94□□□□□ -0.98
LGMN-213ENST00000556790 POLR3GLQ9BT43 218 aa8.94□□□□□ -0.98
LGMN-213ENST00000556790 WDR17Q8IZU2 1322 aa8.94□□□□□ -0.98
LGMN-213ENST00000556790 USP54Q70EL1 1684 aa8.94□□□□□ -0.98
LGMN-213ENST00000556790 MARCH10Q8NA82 808 aaPredicted RBP8.93□□□□□ -0.98
LGMN-213ENST00000556790 GGNBP2Q9H3C7 697 aa8.93□□□□□ -0.98
LGMN-213ENST00000556790 BRD4O60885 1362 aaPredicted RBP8.93□□□□□ -0.98
LGMN-213ENST00000556790 USP31Q70CQ4 1352 aa8.93□□□□□ -0.98
LGMN-213ENST00000556790 OVOS2A0A0J9YW53 1432 aa8.93□□□□□ -0.98
LGMN-213ENST00000556790 OVOS2Q6IE36 1432 aa8.93□□□□□ -0.98
LGMN-213ENST00000556790 EDC4Q6P2E9 1401 aaKnown RBP8.93□□□□□ -0.98
LGMN-213ENST00000556790 NUP188Q5SRE5 1749 aa8.93□□□□□ -0.98
LGMN-213ENST00000556790 RREB1Q92766 1687 aa8.92□□□□□ -0.98
LGMN-213ENST00000556790 RRS1Q15050 365 aaKnown RBP8.92□□□□□ -0.98
LGMN-213ENST00000556790 DDB1Q16531 1140 aa8.92□□□□□ -0.98
LGMN-213ENST00000556790 FAM196AQ6ZSG2 479 aa8.92□□□□□ -0.98
LGMN-213ENST00000556790 KCNH5Q8NCM2 988 aa8.92□□□□□ -0.98
LGMN-213ENST00000556790 CCER1Q8TC90 406 aaPredicted RBP8.92□□□□□ -0.98
LGMN-213ENST00000556790 ANKRD24Q8TF21 1146 aa8.92□□□□□ -0.98
LGMN-213ENST00000556790 ACSBG1Q96GR2 724 aa8.92□□□□□ -0.98
LGMN-213ENST00000556790 CAMKK2Q96RR4 588 aa8.92□□□□□ -0.98
LGMN-213ENST00000556790 NLRP2Q9NX02 1062 aa8.92□□□□□ -0.98
LGMN-213ENST00000556790 DISP2A7MBM2 1401 aa8.91□□□□□ -0.98
LGMN-213ENST00000556790 KCNQ2O43526 872 aa8.91□□□□□ -0.98
LGMN-213ENST00000556790 USHBP1Q8N6Y0 703 aa8.91□□□□□ -0.98
LGMN-213ENST00000556790 CARD14Q9BXL6 1004 aa8.91□□□□□ -0.98
LGMN-213ENST00000556790 TERF2IPQ9NYB0 399 aa8.91□□□□□ -0.98
LGMN-213ENST00000556790 KIF20BQ96Q89 1820 aa8.91□□□□□ -0.98
LGMN-213ENST00000556790 MAP3K19Q56UN5 1328 aa8.9□□□□□ -0.98
LGMN-213ENST00000556790 TMF1P82094 1093 aa8.9□□□□□ -0.98
LGMN-213ENST00000556790 CARD10Q9BWT7 1032 aa8.9□□□□□ -0.98
LGMN-213ENST00000556790 THRAP3Q9Y2W1 955 aaKnown RBP8.9□□□□□ -0.98
LGMN-213ENST00000556790 KAT6BQ8WYB5 2073 aa8.9□□□□□ -0.99
LGMN-213ENST00000556790 ANKRD36BQ8N2N9 1353 aa8.89□□□□□ -0.99
LGMN-213ENST00000556790 ERBB3P21860 1342 aa8.89□□□□□ -0.99
LGMN-213ENST00000556790 FYB1O15117 783 aa8.89□□□□□ -0.99
LGMN-213ENST00000556790 HSPA5P11021 654 aaKnown RBP8.89□□□□□ -0.99
LGMN-213ENST00000556790 PDGFDQ9GZP0 370 aaPredicted RBP8.89□□□□□ -0.99
LGMN-213ENST00000556790 OVOS2A0A0G2JMS6 1433 aa8.88□□□□□ -0.99
LGMN-213ENST00000556790 C11orf95C9JLR9 678 aaPredicted RBP8.88□□□□□ -0.99
LGMN-213ENST00000556790 HOXC9P31274 260 aa8.88□□□□□ -0.99
LGMN-213ENST00000556790 COG3Q96JB2 828 aa8.88□□□□□ -0.99
LGMN-213ENST00000556790 ANO8Q9HCE9 1232 aaPredicted RBP8.88□□□□□ -0.99
LGMN-213ENST00000556790 UTRNP46939 3433 aa8.88□□□□□ -0.99
LGMN-213ENST00000556790 NSD3Q9BZ95 1437 aa8.88□□□□□ -0.99
LGMN-213ENST00000556790 FAM208AQ9UK61 1670 aaKnown RBP8.88□□□□□ -0.99
LGMN-213ENST00000556790 PROM2Q8N271 834 aa8.87□□□□□ -0.99
LGMN-213ENST00000556790 IP6K1Q92551 441 aa8.87□□□□□ -0.99
LGMN-213ENST00000556790 SHANK3Q9BYB0 1731 aa8.87□□□□□ -0.99
LGMN-213ENST00000556790 TNS2Q63HR2 1409 aa8.87□□□□□ -0.99
LGMN-213ENST00000556790 EXOC5O00471 708 aa8.86□□□□□ -0.99
LGMN-213ENST00000556790 TNNT2P45379 298 aaPredicted RBP8.86□□□□□ -0.99
LGMN-213ENST00000556790 AMPHP49418 695 aa8.86□□□□□ -0.99
LGMN-213ENST00000556790 KCNQ4P56696 695 aa8.86□□□□□ -0.99
LGMN-213ENST00000556790 DDX54Q8TDD1 881 aaKnown RBP8.86□□□□□ -0.99
LGMN-213ENST00000556790 EMILIN1Q9Y6C2 1016 aa8.86□□□□□ -0.99
LGMN-213ENST00000556790 MEGF6O75095 1541 aa8.85□□□□□ -0.99
LGMN-213ENST00000556790 BTAF1O14981 1849 aa8.85□□□□□ -0.99
LGMN-213ENST00000556790 IL2RBP14784 551 aa8.85□□□□□ -0.99
LGMN-213ENST00000556790 HSP90AB2PQ58FF8 381 aa8.85□□□□□ -0.99
LGMN-213ENST00000556790 NBPF6Q5VWK0 638 aa8.85□□□□□ -0.99
LGMN-213ENST00000556790 NBPF4Q96M43 638 aa8.85□□□□□ -0.99
LGMN-213ENST00000556790 PUS7Q96PZ0 661 aaKnown RBP8.85□□□□□ -0.99
LGMN-213ENST00000556790 DOT1LQ8TEK3 1739 aa8.85□□□□□ -0.99
LGMN-213ENST00000556790 CCDC7Q96M83 1385 aa8.85□□□□□ -0.99
LGMN-213ENST00000556790 ABCC6O95255 1503 aa8.85□□□□□ -0.99
LGMN-213ENST00000556790 NHSQ6T4R5 1651 aa8.85□□□□□ -0.99
LGMN-213ENST00000556790 LRP5O75197 1615 aa8.84□□□□□ -0.99
LGMN-213ENST00000556790 PPM1GO15355 546 aaPredicted RBP8.84□□□□□ -0.99
LGMN-213ENST00000556790 BCL11BQ9C0K0 894 aaPredicted RBP8.84□□□□□ -0.99
LGMN-213ENST00000556790 MAP2P11137 1827 aaKnown RBP8.84□□□□□ -0.99
LGMN-213ENST00000556790 GOLGB1Q14789 3259 aaKnown RBP8.84□□□□□ -0.99
LGMN-213ENST00000556790 NINLQ9Y2I6 1382 aa8.84□□□□□ -0.99
LGMN-213ENST00000556790 CNGB1Q14028 1251 aaPredicted RBP8.83□□□□□ -1
LGMN-213ENST00000556790 TXNRD1Q16881 649 aa8.82□□□□□ -1
LGMN-213ENST00000556790 SYTL4Q96C24 671 aaPredicted RBP8.82□□□□□ -1
LGMN-213ENST00000556790 CASZ1Q86V15 1759 aa8.81□□□□□ -1
LGMN-213ENST00000556790 ZBTB7AO95365 584 aa8.81□□□□□ -1
LGMN-213ENST00000556790 EIF4G2P78344 907 aaKnown RBP eCLIP8.81□□□□□ -1
LGMN-213ENST00000556790 CDCA7Q9BWT1 371 aaPredicted RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms