RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 KCNH5Q8NCM2 988 aa14.48□□□□□ -0.09
SNX6-208ENST00000556712 POLR3GLQ9BT43 218 aa14.48□□□□□ -0.09
SNX6-208ENST00000556712 EVA1CP58658 441 aa14.47□□□□□ -0.09
SNX6-208ENST00000556712 CDCA8Q53HL2 280 aa14.47□□□□□ -0.09
SNX6-208ENST00000556712 ARHGEF25Q86VW2 580 aa14.47□□□□□ -0.09
SNX6-208ENST00000556712 ABCC6O95255 1503 aa14.46□□□□□ -0.09
SNX6-208ENST00000556712 ONECUT3O60422 494 aaPredicted RBP14.46□□□□□ -0.09
SNX6-208ENST00000556712 AXIN2Q9Y2T1 843 aa14.46□□□□□ -0.09
SNX6-208ENST00000556712 CRB1P82279 1406 aa14.46□□□□□ -0.09
SNX6-208ENST00000556712 NSD3Q9BZ95 1437 aa14.46□□□□□ -0.09
SNX6-208ENST00000556712 EP400Q96L91 3159 aa14.46□□□□□ -0.1
SNX6-208ENST00000556712 LRRC37A3O60309 1634 aa14.45□□□□□ -0.1
SNX6-208ENST00000556712 PARP4Q9UKK3 1724 aaKnown RBP14.45□□□□□ -0.1
SNX6-208ENST00000556712 FAM182BQ5T319 152 aa14.43□□□□□ -0.1
SNX6-208ENST00000556712 KRT27Q7Z3Y8 459 aa14.43□□□□□ -0.1
SNX6-208ENST00000556712 GGNBP2Q9H3C7 697 aa14.43□□□□□ -0.1
SNX6-208ENST00000556712 ANKRD26Q9UPS8 1709 aa14.42□□□□□ -0.1
SNX6-208ENST00000556712 FBLN1P23142 703 aa14.42□□□□□ -0.1
SNX6-208ENST00000556712 COG3Q96JB2 828 aa14.42□□□□□ -0.1
SNX6-208ENST00000556712 CARD14Q9BXL6 1004 aa14.42□□□□□ -0.1
SNX6-208ENST00000556712 WDR17Q8IZU2 1322 aa14.41□□□□□ -0.1
SNX6-208ENST00000556712 C11orf95C9JLR9 678 aaPredicted RBP14.41□□□□□ -0.1
SNX6-208ENST00000556712 TOM1L2Q6ZVM7 507 aa14.41□□□□□ -0.1
SNX6-208ENST00000556712 TCP11L2Q8N4U5 519 aa14.41□□□□□ -0.1
SNX6-208ENST00000556712 RGPD1P0DJD0 1748 aa14.41□□□□□ -0.1
SNX6-208ENST00000556712 PEAK1Q9H792 1746 aa14.41□□□□□ -0.1
SNX6-208ENST00000556712 TNS1Q9HBL0 1735 aaKnown RBP14.41□□□□□ -0.1
SNX6-208ENST00000556712 RGPD2P0DJD1 1756 aa14.4□□□□□ -0.1
SNX6-208ENST00000556712 FYB1O15117 783 aa14.4□□□□□ -0.1
SNX6-208ENST00000556712 BARGINQ6ZT62 677 aa14.4□□□□□ -0.1
SNX6-208ENST00000556712 FAM208AQ9UK61 1670 aaKnown RBP14.39□□□□□ -0.11
SNX6-208ENST00000556712 CSB-PGBD3P0DP91 1061 aa14.39□□□□□ -0.11
SNX6-208ENST00000556712 BLMP54132 1417 aaPredicted RBP14.39□□□□□ -0.11
SNX6-208ENST00000556712 ERBB3P21860 1342 aa14.39□□□□□ -0.11
SNX6-208ENST00000556712 MAP3K19Q56UN5 1328 aa14.39□□□□□ -0.11
SNX6-208ENST00000556712 RRS1Q15050 365 aaKnown RBP14.37□□□□□ -0.11
SNX6-208ENST00000556712 THRAP3Q9Y2W1 955 aaKnown RBP14.37□□□□□ -0.11
SNX6-208ENST00000556712 DISP2A7MBM2 1401 aa14.37□□□□□ -0.11
SNX6-208ENST00000556712 ANKRD24Q8TF21 1146 aa14.36□□□□□ -0.11
SNX6-208ENST00000556712 KIF7Q2M1P5 1343 aa14.36□□□□□ -0.11
SNX6-208ENST00000556712 LTV1Q96GA3 475 aaPredicted RBP14.35□□□□□ -0.11
SNX6-208ENST00000556712 RTL1A6NKG5 1358 aa14.34□□□□□ -0.11
SNX6-208ENST00000556712 HOXC9P31274 260 aa14.34□□□□□ -0.11
SNX6-208ENST00000556712 AMPHP49418 695 aa14.34□□□□□ -0.11
SNX6-208ENST00000556712 IP6K1Q92551 441 aa14.34□□□□□ -0.11
SNX6-208ENST00000556712 CARD10Q9BWT7 1032 aa14.34□□□□□ -0.11
SNX6-208ENST00000556712 MAP2P11137 1827 aaKnown RBP14.34□□□□□ -0.11
SNX6-208ENST00000556712 CCDC7Q96M83 1385 aa14.34□□□□□ -0.11
SNX6-208ENST00000556712 PDE3BQ13370 1112 aa14.33□□□□□ -0.12
SNX6-208ENST00000556712 DEFB132Q7Z7B7 95 aa14.33□□□□□ -0.12
SNX6-208ENST00000556712 PANK3Q9H999 370 aa14.33□□□□□ -0.12
SNX6-208ENST00000556712 NLRP2Q9NX02 1062 aa14.33□□□□□ -0.12
SNX6-208ENST00000556712 SBF2Q86WG5 1849 aa14.33□□□□□ -0.12
SNX6-208ENST00000556712 CGNL1Q0VF96 1302 aa14.32□□□□□ -0.12
SNX6-208ENST00000556712 TNS2Q63HR2 1409 aa14.32□□□□□ -0.12
SNX6-208ENST00000556712 CCDC125Q86Z20 511 aa14.31□□□□□ -0.12
SNX6-208ENST00000556712 EMILIN1Q9Y6C2 1016 aa14.31□□□□□ -0.12
SNX6-208ENST00000556712 OVOS2A0A0G2JMS6 1433 aa14.31□□□□□ -0.12
SNX6-208ENST00000556712 SHANK3Q9BYB0 1731 aa14.3□□□□□ -0.12
SNX6-208ENST00000556712 SF3B2Q13435 895 aaKnown RBP14.3□□□□□ -0.12
SNX6-208ENST00000556712 DDB1Q16531 1140 aa14.3□□□□□ -0.12
SNX6-208ENST00000556712 FLT4P35916 1363 aa14.3□□□□□ -0.12
SNX6-208ENST00000556712 TRIM37O94972 964 aa14.29□□□□□ -0.12
SNX6-208ENST00000556712 FAM196AQ6ZSG2 479 aa14.29□□□□□ -0.12
SNX6-208ENST00000556712 MEGF6O75095 1541 aa14.28□□□□□ -0.12
SNX6-208ENST00000556712 TNNT2P45379 298 aaPredicted RBP14.28□□□□□ -0.12
SNX6-208ENST00000556712 HSP90AB2PQ58FF8 381 aa14.28□□□□□ -0.12
SNX6-208ENST00000556712 SMG6Q86US8 1419 aaKnown RBP14.28□□□□□ -0.12
SNX6-208ENST00000556712 RREB1Q92766 1687 aa14.27□□□□□ -0.12
SNX6-208ENST00000556712 INSRP06213 1382 aa14.27□□□□□ -0.12
SNX6-208ENST00000556712 WASHC2AQ641Q2 1341 aa14.27□□□□□ -0.12
SNX6-208ENST00000556712 IL2RBP14784 551 aa14.27□□□□□ -0.13
SNX6-208ENST00000556712 USHBP1Q8N6Y0 703 aa14.27□□□□□ -0.13
SNX6-208ENST00000556712 MARCH10Q8NA82 808 aaPredicted RBP14.27□□□□□ -0.13
SNX6-208ENST00000556712 CDCA7Q9BWT1 371 aaPredicted RBP14.27□□□□□ -0.13
SNX6-208ENST00000556712 NSD2O96028 1365 aa14.26□□□□□ -0.13
SNX6-208ENST00000556712 PPM1GO15355 546 aaPredicted RBP14.26□□□□□ -0.13
SNX6-208ENST00000556712 BAG6P46379 1132 aa14.26□□□□□ -0.13
SNX6-208ENST00000556712 EN1Q05925 392 aaPredicted RBP14.26□□□□□ -0.13
SNX6-208ENST00000556712 NUP188Q5SRE5 1749 aa14.26□□□□□ -0.13
SNX6-208ENST00000556712 NHSQ6T4R5 1651 aa14.26□□□□□ -0.13
SNX6-208ENST00000556712 KIF24Q5T7B8 1368 aa14.25□□□□□ -0.13
SNX6-208ENST00000556712 DOT1LQ8TEK3 1739 aa14.24□□□□□ -0.13
SNX6-208ENST00000556712 EXOC5O00471 708 aa14.24□□□□□ -0.13
SNX6-208ENST00000556712 NBPF6Q5VWK0 638 aa14.24□□□□□ -0.13
SNX6-208ENST00000556712 PTF1AQ7RTS3 328 aa14.24□□□□□ -0.13
SNX6-208ENST00000556712 NBPF4Q96M43 638 aa14.24□□□□□ -0.13
SNX6-208ENST00000556712 KNSTRNQ9Y448 316 aa14.24□□□□□ -0.13
SNX6-208ENST00000556712 APBA3O96018 575 aa14.23□□□□□ -0.13
SNX6-208ENST00000556712 EZH2Q15910 746 aaKnown RBP14.23□□□□□ -0.13
SNX6-208ENST00000556712 POLKQ9UBT6 870 aa14.23□□□□□ -0.13
SNX6-208ENST00000556712 RGPD3A6NKT7 1758 aaPredicted RBP14.23□□□□□ -0.13
SNX6-208ENST00000556712 RGPD4Q7Z3J3 1758 aa14.23□□□□□ -0.13
SNX6-208ENST00000556712 AMER1Q5JTC6 1135 aaPredicted RBP14.22□□□□□ -0.13
SNX6-208ENST00000556712 MORC1Q86VD1 984 aa14.22□□□□□ -0.13
SNX6-208ENST00000556712 PKD1L3Q7Z443 1732 aa14.21□□□□□ -0.13
SNX6-208ENST00000556712 BTAF1O14981 1849 aa14.21□□□□□ -0.13
SNX6-208ENST00000556712 BCL9O00512 1426 aa14.21□□□□□ -0.13
SNX6-208ENST00000556712 CNGB1Q14028 1251 aaPredicted RBP14.2□□□□□ -0.14
SNX6-208ENST00000556712 ACSBG1Q96GR2 724 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms