RNA–Protein interactions for RNA: ENST00000556644.5

ATXN3-242, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 372 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-242ENST00000556644 MSL1Q68DK7 614 aa6.64□□□□□ -1.35
ATXN3-242ENST00000556644 TMEM132EQ6IEE7 984 aa6.64□□□□□ -1.35
ATXN3-242ENST00000556644 NUP155O75694 1391 aa6.64□□□□□ -1.35
ATXN3-242ENST00000556644 GPRASP1Q5JY77 1395 aa6.64□□□□□ -1.35
ATXN3-242ENST00000556644 TULP4Q9NRJ4 1543 aa6.64□□□□□ -1.35
ATXN3-242ENST00000556644 ARHGEF28Q8N1W1 1705 aaKnown RBP6.64□□□□□ -1.35
ATXN3-242ENST00000556644 PNPLA7Q6ZV29 1317 aa6.63□□□□□ -1.35
ATXN3-242ENST00000556644 RBM46Q8TBY0 533 aaKnown RBP6.63□□□□□ -1.35
ATXN3-242ENST00000556644 ACIN1Q9UKV3 1341 aaKnown RBP6.63□□□□□ -1.35
ATXN3-242ENST00000556644 ZBTB7CA1YPR0 619 aa6.62□□□□□ -1.35
ATXN3-242ENST00000556644 C16orf71Q8IYS4 520 aaPredicted RBP6.62□□□□□ -1.35
ATXN3-242ENST00000556644 ACSBG1Q96GR2 724 aa6.62□□□□□ -1.35
ATXN3-242ENST00000556644 LRRC4BQ9NT99 713 aa6.62□□□□□ -1.35
ATXN3-242ENST00000556644 THRAP3Q9Y2W1 955 aaKnown RBP6.62□□□□□ -1.35
ATXN3-242ENST00000556644 USP19O94966 1318 aa6.61□□□□□ -1.35
ATXN3-242ENST00000556644 FOXN1O15353 648 aa6.61□□□□□ -1.35
ATXN3-242ENST00000556644 KCNQ4P56696 695 aa6.61□□□□□ -1.35
ATXN3-242ENST00000556644 FAM50AQ14320 339 aaKnown RBP6.61□□□□□ -1.35
ATXN3-242ENST00000556644 SLC16A10Q8TF71 515 aa6.61□□□□□ -1.35
ATXN3-242ENST00000556644 ABHD8Q96I13 439 aa6.61□□□□□ -1.35
ATXN3-242ENST00000556644 COL24A1Q17RW2 1714 aa6.61□□□□□ -1.35
ATXN3-242ENST00000556644 KIAA1210Q9ULL0 1709 aa6.61□□□□□ -1.35
ATXN3-242ENST00000556644 AKT1S1Q96B36 256 aa6.6□□□□□ -1.35
ATXN3-242ENST00000556644 TFCP2L1Q9NZI6 479 aa6.6□□□□□ -1.35
ATXN3-242ENST00000556644 LMO7Q8WWI1 1683 aa6.6□□□□□ -1.35
ATXN3-242ENST00000556644 COL5A2P05997 1499 aaPredicted RBP6.6□□□□□ -1.35
ATXN3-242ENST00000556644 KIF1BO60333 1816 aa6.6□□□□□ -1.35
ATXN3-242ENST00000556644 TUBGCP6Q96RT7 1819 aa6.6□□□□□ -1.35
ATXN3-242ENST00000556644 CRB1P82279 1406 aa6.59□□□□□ -1.35
ATXN3-242ENST00000556644 AKAP12Q02952 1782 aa6.59□□□□□ -1.35
ATXN3-242ENST00000556644 KNDC1Q76NI1 1749 aa6.59□□□□□ -1.35
ATXN3-242ENST00000556644 ABCC11Q96J66 1382 aa6.59□□□□□ -1.35
ATXN3-242ENST00000556644 ADGRF5Q8IZF2 1346 aa6.59□□□□□ -1.35
ATXN3-242ENST00000556644 IGSF1Q8N6C5 1336 aa6.59□□□□□ -1.35
ATXN3-242ENST00000556644 PRR36Q9H6K5 1346 aa6.59□□□□□ -1.35
ATXN3-242ENST00000556644 CCDC85CA6NKD9 419 aa6.59□□□□□ -1.35
ATXN3-242ENST00000556644 FSTL1Q12841 308 aa6.59□□□□□ -1.35
ATXN3-242ENST00000556644 NGDNQ8NEJ9 315 aaKnown RBP6.59□□□□□ -1.35
ATXN3-242ENST00000556644 HIRIP3Q9BW71 556 aaPredicted RBP6.59□□□□□ -1.35
ATXN3-242ENST00000556644 YTHDC2Q9H6S0 1430 aaKnown RBP6.59□□□□□ -1.36
ATXN3-242ENST00000556644 PPLO60437 1756 aa6.58□□□□□ -1.36
ATXN3-242ENST00000556644 BCL9O00512 1426 aa6.58□□□□□ -1.36
ATXN3-242ENST00000556644 ANKARQ7Z5J8 1434 aa6.58□□□□□ -1.36
ATXN3-242ENST00000556644 BRD4O60885 1362 aaPredicted RBP6.57□□□□□ -1.36
ATXN3-242ENST00000556644 TOM1L2Q6ZVM7 507 aa6.57□□□□□ -1.36
ATXN3-242ENST00000556644 SP7Q8TDD2 431 aaPredicted RBP6.57□□□□□ -1.36
ATXN3-242ENST00000556644 CFAP44Q96MT7 982 aa6.57□□□□□ -1.36
ATXN3-242ENST00000556644 PRAM1Q96QH2 718 aa6.57□□□□□ -1.36
ATXN3-242ENST00000556644 CD2APQ9Y5K6 639 aa6.57□□□□□ -1.36
ATXN3-242ENST00000556644 NHSQ6T4R5 1651 aa6.57□□□□□ -1.36
ATXN3-242ENST00000556644 KCPQ6ZWJ8 1503 aa6.56□□□□□ -1.36
ATXN3-242ENST00000556644 WNK3Q9BYP7 1800 aa6.56□□□□□ -1.36
ATXN3-242ENST00000556644 PRDM10Q9NQV6 1147 aa6.56□□□□□ -1.36
ATXN3-242ENST00000556644 MKRN1Q9UHC7 482 aaKnown RBP6.56□□□□□ -1.36
ATXN3-242ENST00000556644 VPS8Q8N3P4 1428 aa6.56□□□□□ -1.36
ATXN3-242ENST00000556644 QSER1Q2KHR3 1735 aa6.56□□□□□ -1.36
ATXN3-242ENST00000556644 BTAF1O14981 1849 aa6.55□□□□□ -1.36
ATXN3-242ENST00000556644 RPGRIP1LQ68CZ1 1315 aa6.55□□□□□ -1.36
ATXN3-242ENST00000556644 LBX1P52954 281 aa6.55□□□□□ -1.36
ATXN3-242ENST00000556644 COL23A1Q86Y22 540 aaPredicted RBP6.55□□□□□ -1.36
ATXN3-242ENST00000556644 SMC1BQ8NDV3 1235 aa6.55□□□□□ -1.36
ATXN3-242ENST00000556644 RRAGCQ9HB90 399 aa6.55□□□□□ -1.36
ATXN3-242ENST00000556644 USP6P35125 1406 aa6.55□□□□□ -1.36
ATXN3-242ENST00000556644 CPDO75976 1380 aa6.55□□□□□ -1.36
ATXN3-242ENST00000556644 ANKRD30BQ9BXX2 1392 aa6.55□□□□□ -1.36
ATXN3-242ENST00000556644 CICQ96RK0 1608 aaPredicted RBP6.54□□□□□ -1.36
ATXN3-242ENST00000556644 MINK1Q8N4C8 1332 aaPredicted RBP6.54□□□□□ -1.36
ATXN3-242ENST00000556644 CTCFP49711 727 aaPredicted RBP6.54□□□□□ -1.36
ATXN3-242ENST00000556644 PDE4DIPQ5VU43 2346 aa6.54□□□□□ -1.36
ATXN3-242ENST00000556644 EXOC5O00471 708 aa6.53□□□□□ -1.36
ATXN3-242ENST00000556644 RGS19P49795 217 aa6.53□□□□□ -1.36
ATXN3-242ENST00000556644 C9orf131Q5VYM1 1079 aa6.53□□□□□ -1.36
ATXN3-242ENST00000556644 ARHGAP27Q6ZUM4 889 aa6.53□□□□□ -1.36
ATXN3-242ENST00000556644 AIDAQ96BJ3 306 aa6.53□□□□□ -1.36
ATXN3-242ENST00000556644 POGKQ9P215 609 aa6.53□□□□□ -1.36
ATXN3-242ENST00000556644 RGL3Q3MIN7 710 aa6.52□□□□□ -1.37
ATXN3-242ENST00000556644 SMIM5Q71RC9 77 aa6.52□□□□□ -1.37
ATXN3-242ENST00000556644 BCS1LQ9Y276 419 aa6.52□□□□□ -1.37
ATXN3-242ENST00000556644 TRPM1Q7Z4N2 1603 aa6.51□□□□□ -1.37
ATXN3-242ENST00000556644 GCP02774 474 aa6.51□□□□□ -1.37
ATXN3-242ENST00000556644 CSB-PGBD3P0DP91 1061 aa6.51□□□□□ -1.37
ATXN3-242ENST00000556644 DSG3P32926 999 aa6.51□□□□□ -1.37
ATXN3-242ENST00000556644 SLC27A3Q5K4L6 730 aa6.51□□□□□ -1.37
ATXN3-242ENST00000556644 ABTB2Q8N961 1025 aa6.51□□□□□ -1.37
ATXN3-242ENST00000556644 CDCA7Q9BWT1 371 aaPredicted RBP6.51□□□□□ -1.37
ATXN3-242ENST00000556644 WDR17Q8IZU2 1322 aa6.5□□□□□ -1.37
ATXN3-242ENST00000556644 KDM2BQ8NHM5 1336 aa6.5□□□□□ -1.37
ATXN3-242ENST00000556644 KAT6BQ8WYB5 2073 aa6.5□□□□□ -1.37
ATXN3-242ENST00000556644 ITGAEP38570 1179 aa6.5□□□□□ -1.37
ATXN3-242ENST00000556644 SIRT1Q96EB6 747 aa6.5□□□□□ -1.37
ATXN3-242ENST00000556644 PLSCR2Q9NRY7 297 aa6.5□□□□□ -1.37
ATXN3-242ENST00000556644 AXIN2Q9Y2T1 843 aa6.5□□□□□ -1.37
ATXN3-242ENST00000556644 PIK3C2GO75747 1445 aa6.5□□□□□ -1.37
ATXN3-242ENST00000556644 PIK3C2AO00443 1686 aa6.49□□□□□ -1.37
ATXN3-242ENST00000556644 PLEKHG2Q9H7P9 1386 aa6.49□□□□□ -1.37
ATXN3-242ENST00000556644 HSPA8P11142 646 aaKnown RBP6.49□□□□□ -1.37
ATXN3-242ENST00000556644 SYTL4Q96C24 671 aaPredicted RBP6.49□□□□□ -1.37
ATXN3-242ENST00000556644 PKD1L3Q7Z443 1732 aa6.49□□□□□ -1.37
ATXN3-242ENST00000556644 C10orf71Q711Q0 1435 aa6.49□□□□□ -1.37
ATXN3-242ENST00000556644 PXDNLA1KZ92 1463 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms