RNA–Protein interactions for RNA: ENST00000556639.5

EFCAB11-212, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 5

Gene EFCAB11, Length 2,326 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-212ENST00000556639 FLT4P35916 1363 aa18.18■□□□□ 0.5
EFCAB11-212ENST00000556639 NFAT5O94916 1531 aa18.18■□□□□ 0.5
EFCAB11-212ENST00000556639 PHF23Q9BUL5 403 aaPredicted RBP18.18■□□□□ 0.5
EFCAB11-212ENST00000556639 MAPK8IP3Q9UPT6 1336 aa18.18■□□□□ 0.5
EFCAB11-212ENST00000556639 GCP02774 474 aa18.17■□□□□ 0.5
EFCAB11-212ENST00000556639 LTV1Q96GA3 475 aaPredicted RBP18.17■□□□□ 0.5
EFCAB11-212ENST00000556639 SULT6B1Q6IMI4 303 aa18.17■□□□□ 0.5
EFCAB11-212ENST00000556639 NPHP3Q7Z494 1330 aa18.16■□□□□ 0.5
EFCAB11-212ENST00000556639 LTN1O94822 1766 aa18.16■□□□□ 0.5
EFCAB11-212ENST00000556639 ALS2Q96Q42 1657 aa18.16■□□□□ 0.5
EFCAB11-212ENST00000556639 CABLES1Q8TDN4 633 aa18.16■□□□□ 0.5
EFCAB11-212ENST00000556639 TRIM35Q9UPQ4 493 aa18.16■□□□□ 0.5
EFCAB11-212ENST00000556639 PXDNQ92626 1479 aa18.15■□□□□ 0.5
EFCAB11-212ENST00000556639 RIPK4P57078 832 aa18.15■□□□□ 0.5
EFCAB11-212ENST00000556639 TRMT2AQ8IZ69 625 aaKnown RBP18.15■□□□□ 0.5
EFCAB11-212ENST00000556639 EYA1Q99502 592 aa18.14■□□□□ 0.49
EFCAB11-212ENST00000556639 NEFLP07196 543 aa18.14■□□□□ 0.49
EFCAB11-212ENST00000556639 NGEFQ8N5V2 710 aa18.14■□□□□ 0.49
EFCAB11-212ENST00000556639 USP19O94966 1318 aa18.13■□□□□ 0.49
EFCAB11-212ENST00000556639 RGPD1P0DJD0 1748 aa18.13■□□□□ 0.49
EFCAB11-212ENST00000556639 MED1Q15648 1581 aaPredicted RBP18.13■□□□□ 0.49
EFCAB11-212ENST00000556639 KCNH5Q8NCM2 988 aa18.13■□□□□ 0.49
EFCAB11-212ENST00000556639 RCAN3Q9UKA8 241 aa18.13■□□□□ 0.49
EFCAB11-212ENST00000556639 CCDC27Q2M243 656 aa18.12■□□□□ 0.49
EFCAB11-212ENST00000556639 PNNQ9H307 717 aaKnown RBP18.12■□□□□ 0.49
EFCAB11-212ENST00000556639 SLIT3O75094 1523 aa18.12■□□□□ 0.49
EFCAB11-212ENST00000556639 ZC3H6P61129 1189 aaKnown RBP18.12■□□□□ 0.49
EFCAB11-212ENST00000556639 ARHGEF25Q86VW2 580 aa18.11■□□□□ 0.49
EFCAB11-212ENST00000556639 IP6K1Q92551 441 aa18.11■□□□□ 0.49
EFCAB11-212ENST00000556639 SPATA31A3Q5VYP0 1347 aa18.11■□□□□ 0.49
EFCAB11-212ENST00000556639 LTBP4Q8N2S1 1624 aa18.11■□□□□ 0.49
EFCAB11-212ENST00000556639 E9PSI1 815 aa18.11■□□□□ 0.49
EFCAB11-212ENST00000556639 TNS3Q68CZ2 1445 aa18.1■□□□□ 0.49
EFCAB11-212ENST00000556639 NFE2L2Q16236 605 aa18.1■□□□□ 0.49
EFCAB11-212ENST00000556639 USHBP1Q8N6Y0 703 aa18.1■□□□□ 0.49
EFCAB11-212ENST00000556639 THUMPD2Q9BTF0 503 aaKnown RBP18.1■□□□□ 0.49
EFCAB11-212ENST00000556639 AXIN2Q9Y2T1 843 aa18.1■□□□□ 0.49
EFCAB11-212ENST00000556639 WDR63Q8IWG1 891 aa18.09■□□□□ 0.49
EFCAB11-212ENST00000556639 KIF24Q5T7B8 1368 aa18.09■□□□□ 0.49
EFCAB11-212ENST00000556639 NEFMP07197 916 aa18.09■□□□□ 0.49
EFCAB11-212ENST00000556639 RNF123Q5XPI4 1314 aa18.08■□□□□ 0.49
EFCAB11-212ENST00000556639 IGSF1Q8N6C5 1336 aa18.08■□□□□ 0.48
EFCAB11-212ENST00000556639 SOS2Q07890 1332 aaPredicted RBP18.07■□□□□ 0.48
EFCAB11-212ENST00000556639 ARHGEF10O15013 1369 aa18.07■□□□□ 0.48
EFCAB11-212ENST00000556639 FAM83GA6ND36 823 aa18.07■□□□□ 0.48
EFCAB11-212ENST00000556639 LRRC59Q96AG4 307 aaKnown RBP18.07■□□□□ 0.48
EFCAB11-212ENST00000556639 RTL1A6NKG5 1358 aa18.07■□□□□ 0.48
EFCAB11-212ENST00000556639 NCBP3Q53F19 620 aaKnown RBP18.06■□□□□ 0.48
EFCAB11-212ENST00000556639 TSR2Q969E8 191 aaKnown RBP18.06■□□□□ 0.48
EFCAB11-212ENST00000556639 DLG5Q8TDM6 1919 aa18.06■□□□□ 0.48
EFCAB11-212ENST00000556639 DCTN1Q14203 1278 aa18.06■□□□□ 0.48
EFCAB11-212ENST00000556639 NBPF6Q5VWK0 638 aa18.06■□□□□ 0.48
EFCAB11-212ENST00000556639 NBPF4Q96M43 638 aa18.06■□□□□ 0.48
EFCAB11-212ENST00000556639 RGPD2P0DJD1 1756 aa18.05■□□□□ 0.48
EFCAB11-212ENST00000556639 PLIN1O60240 522 aa18.05■□□□□ 0.48
EFCAB11-212ENST00000556639 KDRP35968 1356 aa18.05■□□□□ 0.48
EFCAB11-212ENST00000556639 PHRF1Q9P1Y6 1649 aaKnown RBP18.04■□□□□ 0.48
EFCAB11-212ENST00000556639 RGPD5Q99666 1765 aa18.04■□□□□ 0.48
EFCAB11-212ENST00000556639 RRP1P56182 461 aaKnown RBP18.04■□□□□ 0.48
EFCAB11-212ENST00000556639 CHRNA2Q15822 529 aa18.04■□□□□ 0.48
EFCAB11-212ENST00000556639 MTHFSDQ2M296 383 aaKnown RBP18.03■□□□□ 0.48
EFCAB11-212ENST00000556639 CRYBG1Q9Y4K1 1723 aa18.02■□□□□ 0.48
EFCAB11-212ENST00000556639 ANKRD24Q8TF21 1146 aa18.02■□□□□ 0.48
EFCAB11-212ENST00000556639 LAS1LQ9Y4W2 734 aaKnown RBP18.01■□□□□ 0.47
EFCAB11-212ENST00000556639 NHSL1Q5SYE7 1610 aa18.01■□□□□ 0.47
EFCAB11-212ENST00000556639 FANCIQ9NVI1 1328 aa18.01■□□□□ 0.47
EFCAB11-212ENST00000556639 BCAR3O75815 825 aa18■□□□□ 0.47
EFCAB11-212ENST00000556639 KIAA0232Q92628 1395 aa18■□□□□ 0.47
EFCAB11-212ENST00000556639 ROBO1Q9Y6N7 1651 aa18■□□□□ 0.47
EFCAB11-212ENST00000556639 MCM10Q7L590 875 aa17.99■□□□□ 0.47
EFCAB11-212ENST00000556639 MYH16Q9H6N6 1097 aa17.99■□□□□ 0.47
EFCAB11-212ENST00000556639 EXOSC9Q06265 439 aaKnown RBP17.98■□□□□ 0.47
EFCAB11-212ENST00000556639 COL18A1P39060 1754 aa17.97■□□□□ 0.47
EFCAB11-212ENST00000556639 IL16Q14005 1332 aa17.97■□□□□ 0.47
EFCAB11-212ENST00000556639 C20orf194Q5TEA3 1177 aa17.97■□□□□ 0.47
EFCAB11-212ENST00000556639 ERBB3P21860 1342 aa17.96■□□□□ 0.47
EFCAB11-212ENST00000556639 AEBP2Q6ZN18 517 aaPredicted RBP17.96■□□□□ 0.47
EFCAB11-212ENST00000556639 PIP4K2BP78356 416 aa17.94■□□□□ 0.46
EFCAB11-212ENST00000556639 BCL2L13Q9BXK5 485 aa17.94■□□□□ 0.46
EFCAB11-212ENST00000556639 HAP1P54257 671 aaPredicted RBP17.94■□□□□ 0.46
EFCAB11-212ENST00000556639 LMOD3Q0VAK6 560 aa17.94■□□□□ 0.46
EFCAB11-212ENST00000556639 ZNF853P0CG23 659 aa17.93■□□□□ 0.46
EFCAB11-212ENST00000556639 MBIPQ9NS73 344 aa17.93■□□□□ 0.46
EFCAB11-212ENST00000556639 RARSP54136 660 aaKnown RBP17.93■□□□□ 0.46
EFCAB11-212ENST00000556639 EXOC6Q8TAG9 804 aa17.93■□□□□ 0.46
EFCAB11-212ENST00000556639 CPDO75976 1380 aa17.92■□□□□ 0.46
EFCAB11-212ENST00000556639 PRDM11Q9NQV5 511 aa17.92■□□□□ 0.46
EFCAB11-212ENST00000556639 NLRP2Q9NX02 1062 aa17.92■□□□□ 0.46
EFCAB11-212ENST00000556639 ABCA3Q99758 1704 aa17.92■□□□□ 0.46
EFCAB11-212ENST00000556639 GAS2L2Q8NHY3 880 aa17.92■□□□□ 0.46
EFCAB11-212ENST00000556639 MIS18AQ9NYP9 233 aa17.92■□□□□ 0.46
EFCAB11-212ENST00000556639 IFT57Q9NWB7 429 aa17.91■□□□□ 0.46
EFCAB11-212ENST00000556639 CSB-PGBD3P0DP91 1061 aa17.9■□□□□ 0.46
EFCAB11-212ENST00000556639 GNAI1P63096 354 aa17.9■□□□□ 0.46
EFCAB11-212ENST00000556639 CFAP44Q96MT7 982 aa17.9■□□□□ 0.46
EFCAB11-212ENST00000556639 ELL2O00472 640 aaPredicted RBP17.9■□□□□ 0.46
EFCAB11-212ENST00000556639 NCAPD2Q15021 1401 aa17.9■□□□□ 0.46
EFCAB11-212ENST00000556639 TSPYL6Q8N831 410 aa17.9■□□□□ 0.46
EFCAB11-212ENST00000556639 CAMTA1Q9Y6Y1 1673 aa17.89■□□□□ 0.45
EFCAB11-212ENST00000556639 CRB1P82279 1406 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms