RNA–Protein interactions for RNA: ENST00000556462.1

LINC01550-206, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 2 BASIC

Gene LINC01550, Length 2,098 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-206ENST00000556462 PNNQ9H307 717 aaKnown RBP14.29□□□□□ -0.12
LINC01550-206ENST00000556462 RRP7AQ9Y3A4 280 aaKnown RBP14.29□□□□□ -0.12
LINC01550-206ENST00000556462 GTF3C3Q9Y5Q9 886 aa14.29□□□□□ -0.12
LINC01550-206ENST00000556462 PRKAR2BP31323 418 aa14.29□□□□□ -0.12
LINC01550-206ENST00000556462 ARHGEF25Q86VW2 580 aa14.29□□□□□ -0.12
LINC01550-206ENST00000556462 WWC1Q8IX03 1113 aa14.29□□□□□ -0.12
LINC01550-206ENST00000556462 TNS3Q68CZ2 1445 aa14.28□□□□□ -0.12
LINC01550-206ENST00000556462 NEUROD2Q15784 382 aa14.28□□□□□ -0.12
LINC01550-206ENST00000556462 IP6K1Q92551 441 aa14.28□□□□□ -0.12
LINC01550-206ENST00000556462 PLEKHG5O94827 1062 aa14.27□□□□□ -0.13
LINC01550-206ENST00000556462 TMPOP42166 694 aaKnown RBP14.27□□□□□ -0.13
LINC01550-206ENST00000556462 GOLGA2Q08379 1002 aa14.27□□□□□ -0.13
LINC01550-206ENST00000556462 CCDC27Q2M243 656 aa14.27□□□□□ -0.13
LINC01550-206ENST00000556462 PHACTR3Q96KR7 559 aa14.27□□□□□ -0.13
LINC01550-206ENST00000556462 RTL1A6NKG5 1358 aa14.27□□□□□ -0.13
LINC01550-206ENST00000556462 MED1Q15648 1581 aaPredicted RBP14.27□□□□□ -0.13
LINC01550-206ENST00000556462 MAPK8IP3Q9UPT6 1336 aa14.26□□□□□ -0.13
LINC01550-206ENST00000556462 SULT6B1Q6IMI4 303 aa14.26□□□□□ -0.13
LINC01550-206ENST00000556462 AEBP1Q8IUX7 1158 aa14.26□□□□□ -0.13
LINC01550-206ENST00000556462 EYA1Q99502 592 aa14.26□□□□□ -0.13
LINC01550-206ENST00000556462 SPINK5Q9NQ38 1064 aaPredicted RBP14.26□□□□□ -0.13
LINC01550-206ENST00000556462 ARHGEF10O15013 1369 aa14.25□□□□□ -0.13
LINC01550-206ENST00000556462 CABLES1Q8TDN4 633 aa14.25□□□□□ -0.13
LINC01550-206ENST00000556462 SLFN5Q08AF3 891 aa14.24□□□□□ -0.13
LINC01550-206ENST00000556462 TRMT2AQ8IZ69 625 aaKnown RBP14.24□□□□□ -0.13
LINC01550-206ENST00000556462 SUPT16HQ9Y5B9 1047 aaKnown RBP14.24□□□□□ -0.13
LINC01550-206ENST00000556462 RGPD1P0DJD0 1748 aa14.24□□□□□ -0.13
LINC01550-206ENST00000556462 IGSF1Q8N6C5 1336 aa14.24□□□□□ -0.13
LINC01550-206ENST00000556462 DUSP27Q5VZP5 1158 aa14.24□□□□□ -0.13
LINC01550-206ENST00000556462 TRIM35Q9UPQ4 493 aa14.24□□□□□ -0.13
LINC01550-206ENST00000556462 LTN1O94822 1766 aa14.23□□□□□ -0.13
LINC01550-206ENST00000556462 PHRF1Q9P1Y6 1649 aaKnown RBP14.23□□□□□ -0.13
LINC01550-206ENST00000556462 ZC3H6P61129 1189 aaKnown RBP14.23□□□□□ -0.13
LINC01550-206ENST00000556462 KDRP35968 1356 aa14.23□□□□□ -0.13
LINC01550-206ENST00000556462 ZBTB7CA1YPR0 619 aa14.22□□□□□ -0.13
LINC01550-206ENST00000556462 RIPK4P57078 832 aa14.22□□□□□ -0.13
LINC01550-206ENST00000556462 WDR63Q8IWG1 891 aa14.22□□□□□ -0.13
LINC01550-206ENST00000556462 AXIN2Q9Y2T1 843 aa14.22□□□□□ -0.13
LINC01550-206ENST00000556462 NEFMP07197 916 aa14.22□□□□□ -0.13
LINC01550-206ENST00000556462 LTV1Q96GA3 475 aaPredicted RBP14.22□□□□□ -0.13
LINC01550-206ENST00000556462 NHSL1Q5SYE7 1610 aa14.22□□□□□ -0.13
LINC01550-206ENST00000556462 NFE2L2Q16236 605 aa14.21□□□□□ -0.13
LINC01550-206ENST00000556462 E9PSI1 815 aa14.21□□□□□ -0.14
LINC01550-206ENST00000556462 PELP1Q8IZL8 1130 aaKnown RBP14.2□□□□□ -0.14
LINC01550-206ENST00000556462 NBPF6Q5VWK0 638 aa14.19□□□□□ -0.14
LINC01550-206ENST00000556462 NBPF4Q96M43 638 aa14.19□□□□□ -0.14
LINC01550-206ENST00000556462 CRYBG1Q9Y4K1 1723 aa14.19□□□□□ -0.14
LINC01550-206ENST00000556462 ROBO1Q9Y6N7 1651 aa14.19□□□□□ -0.14
LINC01550-206ENST00000556462 CPDO75976 1380 aa14.18□□□□□ -0.14
LINC01550-206ENST00000556462 ANKRD24Q8TF21 1146 aa14.18□□□□□ -0.14
LINC01550-206ENST00000556462 RNF123Q5XPI4 1314 aa14.17□□□□□ -0.14
LINC01550-206ENST00000556462 TOM1O60784 492 aa14.17□□□□□ -0.14
LINC01550-206ENST00000556462 LRRC59Q96AG4 307 aaKnown RBP14.17□□□□□ -0.14
LINC01550-206ENST00000556462 KIAA0232Q92628 1395 aa14.16□□□□□ -0.14
LINC01550-206ENST00000556462 USHBP1Q8N6Y0 703 aa14.16□□□□□ -0.14
LINC01550-206ENST00000556462 RCAN3Q9UKA8 241 aa14.16□□□□□ -0.14
LINC01550-206ENST00000556462 ERBB3P21860 1342 aa14.16□□□□□ -0.14
LINC01550-206ENST00000556462 AHDC1Q5TGY3 1603 aaPredicted RBP14.16□□□□□ -0.14
LINC01550-206ENST00000556462 CHRNA2Q15822 529 aa14.16□□□□□ -0.14
LINC01550-206ENST00000556462 MTHFSDQ2M296 383 aaKnown RBP14.15□□□□□ -0.14
LINC01550-206ENST00000556462 COL18A1P39060 1754 aa14.15□□□□□ -0.14
LINC01550-206ENST00000556462 IL16Q14005 1332 aa14.15□□□□□ -0.14
LINC01550-206ENST00000556462 NCAPD2Q15021 1401 aa14.13□□□□□ -0.15
LINC01550-206ENST00000556462 FAM83GA6ND36 823 aa14.13□□□□□ -0.15
LINC01550-206ENST00000556462 FKBP8Q14318 412 aa14.13□□□□□ -0.15
LINC01550-206ENST00000556462 THUMPD2Q9BTF0 503 aaKnown RBP14.13□□□□□ -0.15
LINC01550-206ENST00000556462 PIP4K2BP78356 416 aa14.13□□□□□ -0.15
LINC01550-206ENST00000556462 LMOD3Q0VAK6 560 aa14.13□□□□□ -0.15
LINC01550-206ENST00000556462 MYH16Q9H6N6 1097 aa14.13□□□□□ -0.15
LINC01550-206ENST00000556462 ABCC6O95255 1503 aa14.12□□□□□ -0.15
LINC01550-206ENST00000556462 NEFLP07196 543 aa14.12□□□□□ -0.15
LINC01550-206ENST00000556462 RGPD5Q99666 1765 aa14.12□□□□□ -0.15
LINC01550-206ENST00000556462 UBAP1LF5GYI3 381 aa14.11□□□□□ -0.15
LINC01550-206ENST00000556462 HAP1P54257 671 aaPredicted RBP14.11□□□□□ -0.15
LINC01550-206ENST00000556462 DCTN1Q14203 1278 aa14.11□□□□□ -0.15
LINC01550-206ENST00000556462 PRDM11Q9NQV5 511 aa14.11□□□□□ -0.15
LINC01550-206ENST00000556462 RGPD2P0DJD1 1756 aa14.11□□□□□ -0.15
LINC01550-206ENST00000556462 GAS2L2Q8NHY3 880 aa14.11□□□□□ -0.15
LINC01550-206ENST00000556462 TSR2Q969E8 191 aaKnown RBP14.11□□□□□ -0.15
LINC01550-206ENST00000556462 DLG5Q8TDM6 1919 aa14.11□□□□□ -0.15
LINC01550-206ENST00000556462 FANCIQ9NVI1 1328 aa14.1□□□□□ -0.15
LINC01550-206ENST00000556462 ABCA3Q99758 1704 aa14.1□□□□□ -0.15
LINC01550-206ENST00000556462 ZNF853P0CG23 659 aa14.1□□□□□ -0.15
LINC01550-206ENST00000556462 IRX6P78412 446 aaPredicted RBP14.1□□□□□ -0.15
LINC01550-206ENST00000556462 CALD1Q05682 793 aaKnown RBP14.1□□□□□ -0.15
LINC01550-206ENST00000556462 CERKQ8TCT0 537 aa14.09□□□□□ -0.15
LINC01550-206ENST00000556462 CAMTA1Q9Y6Y1 1673 aa14.09□□□□□ -0.15
LINC01550-206ENST00000556462 RRP1P56182 461 aaKnown RBP14.08□□□□□ -0.15
LINC01550-206ENST00000556462 MCM10Q7L590 875 aa14.08□□□□□ -0.15
LINC01550-206ENST00000556462 IFT57Q9NWB7 429 aa14.08□□□□□ -0.15
LINC01550-206ENST00000556462 NLRP2Q9NX02 1062 aa14.08□□□□□ -0.15
LINC01550-206ENST00000556462 LMO7Q8WWI1 1683 aa14.08□□□□□ -0.15
LINC01550-206ENST00000556462 COL16A1Q07092 1604 aaPredicted RBP14.08□□□□□ -0.16
LINC01550-206ENST00000556462 HTATSF1O43719 755 aaKnown RBP14.08□□□□□ -0.16
LINC01550-206ENST00000556462 CFAP44Q96MT7 982 aa14.08□□□□□ -0.16
LINC01550-206ENST00000556462 CSB-PGBD3P0DP91 1061 aa14.07□□□□□ -0.16
LINC01550-206ENST00000556462 GNAI1P63096 354 aa14.07□□□□□ -0.16
LINC01550-206ENST00000556462 GNAT3A8MTJ3 354 aa14.06□□□□□ -0.16
LINC01550-206ENST00000556462 EXOSC9Q06265 439 aaKnown RBP14.06□□□□□ -0.16
LINC01550-206ENST00000556462 LAS1LQ9Y4W2 734 aaKnown RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms