RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 DDX12PQ92771 950 aa10.85□□□□□ -0.67
ATXN3-236ENST00000556220 C8orf37Q96NL8 207 aa10.85□□□□□ -0.67
ATXN3-236ENST00000556220 RGS12O14924 1447 aa10.84□□□□□ -0.67
ATXN3-236ENST00000556220 NOS1P29475 1434 aa10.84□□□□□ -0.67
ATXN3-236ENST00000556220 MYOM3Q5VTT5 1437 aa10.84□□□□□ -0.67
ATXN3-236ENST00000556220 ERBINQ96RT1 1412 aa10.84□□□□□ -0.67
ATXN3-236ENST00000556220 PROX2Q3B8N5 592 aa10.84□□□□□ -0.67
ATXN3-236ENST00000556220 LRRC59Q96AG4 307 aaKnown RBP10.84□□□□□ -0.67
ATXN3-236ENST00000556220 NGLY1Q96IV0 654 aa10.84□□□□□ -0.67
ATXN3-236ENST00000556220 AHDC1Q5TGY3 1603 aaPredicted RBP10.84□□□□□ -0.67
ATXN3-236ENST00000556220 LAPTM4BQ86VI4 370 aa10.83□□□□□ -0.68
ATXN3-236ENST00000556220 KDM5AP29375 1690 aaKnown RBP10.82□□□□□ -0.68
ATXN3-236ENST00000556220 ATAD2Q6PL18 1390 aa10.82□□□□□ -0.68
ATXN3-236ENST00000556220 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.82□□□□□ -0.68
ATXN3-236ENST00000556220 ZFYVE9O95405 1425 aa10.82□□□□□ -0.68
ATXN3-236ENST00000556220 SETD5Q9C0A6 1442 aa10.82□□□□□ -0.68
ATXN3-236ENST00000556220 LMTK2Q8IWU2 1503 aa10.81□□□□□ -0.68
ATXN3-236ENST00000556220 SHPRHQ149N8 1683 aa10.81□□□□□ -0.68
ATXN3-236ENST00000556220 RIMS2Q9UQ26 1411 aa10.81□□□□□ -0.68
ATXN3-236ENST00000556220 PIK3R4Q99570 1358 aa10.8□□□□□ -0.68
ATXN3-236ENST00000556220 EN1Q05925 392 aaPredicted RBP10.8□□□□□ -0.68
ATXN3-236ENST00000556220 NBR1Q14596 966 aa10.8□□□□□ -0.68
ATXN3-236ENST00000556220 KANK4Q5T7N3 995 aaPredicted RBP10.8□□□□□ -0.68
ATXN3-236ENST00000556220 CCDC125Q86Z20 511 aa10.8□□□□□ -0.68
ATXN3-236ENST00000556220 KIAA1468Q9P260 1216 aa10.8□□□□□ -0.68
ATXN3-236ENST00000556220 AMOTL2Q9Y2J4 779 aa10.8□□□□□ -0.68
ATXN3-236ENST00000556220 ABCC5O15440 1437 aa10.8□□□□□ -0.68
ATXN3-236ENST00000556220 ADGRB3O60242 1522 aa10.79□□□□□ -0.68
ATXN3-236ENST00000556220 DIP2AQ14689 1571 aa10.79□□□□□ -0.68
ATXN3-236ENST00000556220 CHD2O14647 1828 aaKnown RBP10.79□□□□□ -0.68
ATXN3-236ENST00000556220 ADAMTS13Q76LX8 1427 aa10.78□□□□□ -0.68
ATXN3-236ENST00000556220 ADAMTS2O95450 1211 aa10.78□□□□□ -0.68
ATXN3-236ENST00000556220 ANKK1Q8NFD2 765 aa10.78□□□□□ -0.68
ATXN3-236ENST00000556220 TRPC5Q9UL62 973 aaPredicted RBP10.78□□□□□ -0.68
ATXN3-236ENST00000556220 TRIM6-TRIM34B2RNG4 842 aa10.77□□□□□ -0.69
ATXN3-236ENST00000556220 DDX17Q92841 729 aaKnown RBP10.77□□□□□ -0.69
ATXN3-236ENST00000556220 USP21Q9UK80 565 aa10.77□□□□□ -0.69
ATXN3-236ENST00000556220 CHIC2Q9UKJ5 165 aa10.77□□□□□ -0.69
ATXN3-236ENST00000556220 PNPLA6Q8IY17 1366 aa10.77□□□□□ -0.69
ATXN3-236ENST00000556220 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.76□□□□□ -0.69
ATXN3-236ENST00000556220 MAP3K7O43318 606 aa10.76□□□□□ -0.69
ATXN3-236ENST00000556220 FNBP4Q8N3X1 1017 aaPredicted RBP10.76□□□□□ -0.69
ATXN3-236ENST00000556220 DCCP43146 1447 aa10.75□□□□□ -0.69
ATXN3-236ENST00000556220 SETBP1Q9Y6X0 1596 aa10.75□□□□□ -0.69
ATXN3-236ENST00000556220 IFFO2Q5TF58 517 aa10.75□□□□□ -0.69
ATXN3-236ENST00000556220 ANKRD30AQ9BXX3 1397 aa10.75□□□□□ -0.69
ATXN3-236ENST00000556220 EP400Q96L91 3159 aa10.75□□□□□ -0.69
ATXN3-236ENST00000556220 PTPRUQ92729 1446 aa10.75□□□□□ -0.69
ATXN3-236ENST00000556220 ASXL1Q8IXJ9 1541 aa10.74□□□□□ -0.69
ATXN3-236ENST00000556220 TSR1Q2NL82 804 aaKnown RBP10.74□□□□□ -0.69
ATXN3-236ENST00000556220 ZFRQ96KR1 1074 aaKnown RBP10.74□□□□□ -0.69
ATXN3-236ENST00000556220 MST1RQ04912 1400 aa10.74□□□□□ -0.69
ATXN3-236ENST00000556220 RPRD2Q5VT52 1461 aaKnown RBP10.73□□□□□ -0.69
ATXN3-236ENST00000556220 SOWAHBA6NEL2 793 aa10.72□□□□□ -0.69
ATXN3-236ENST00000556220 FAM98CQ17RN3 349 aaKnown RBP10.72□□□□□ -0.69
ATXN3-236ENST00000556220 PACS2Q86VP3 889 aa10.72□□□□□ -0.69
ATXN3-236ENST00000556220 DAPK1P53355 1430 aa10.72□□□□□ -0.69
ATXN3-236ENST00000556220 GRXCR2A6NFK2 248 aa10.71□□□□□ -0.69
ATXN3-236ENST00000556220 ATRNO75882 1429 aa10.71□□□□□ -0.69
ATXN3-236ENST00000556220 SOS2Q07890 1332 aaPredicted RBP10.7□□□□□ -0.7
ATXN3-236ENST00000556220 SEPT9Q9UHD8 586 aaPredicted RBP10.7□□□□□ -0.7
ATXN3-236ENST00000556220 BCAMP50895 628 aa10.69□□□□□ -0.7
ATXN3-236ENST00000556220 NYAP1Q6ZVC0 841 aa10.69□□□□□ -0.7
ATXN3-236ENST00000556220 GJD4Q96KN9 370 aaPredicted RBP10.69□□□□□ -0.7
ATXN3-236ENST00000556220 TSKSQ9UJT2 592 aa10.69□□□□□ -0.7
ATXN3-236ENST00000556220 TMEM131LA2VDJ0 1609 aa10.69□□□□□ -0.7
ATXN3-236ENST00000556220 PTCH1Q13635 1447 aa10.68□□□□□ -0.7
ATXN3-236ENST00000556220 VPS8Q8N3P4 1428 aa10.68□□□□□ -0.7
ATXN3-236ENST00000556220 OSBPP22059 807 aa10.68□□□□□ -0.7
ATXN3-236ENST00000556220 PRSS12P56730 875 aa10.68□□□□□ -0.7
ATXN3-236ENST00000556220 TSHZ2Q9NRE2 1034 aa10.68□□□□□ -0.7
ATXN3-236ENST00000556220 PRIM1P49642 420 aaKnown RBP10.67□□□□□ -0.7
ATXN3-236ENST00000556220 DEFB132Q7Z7B7 95 aa10.67□□□□□ -0.7
ATXN3-236ENST00000556220 CDCA7LQ96GN5 454 aa10.67□□□□□ -0.7
ATXN3-236ENST00000556220 ORAI2Q96SN7 254 aa10.67□□□□□ -0.7
ATXN3-236ENST00000556220 TRPM2O94759 1503 aa10.67□□□□□ -0.7
ATXN3-236ENST00000556220 C1orf167Q5SNV9 1468 aa10.66□□□□□ -0.7
ATXN3-236ENST00000556220 BLMP54132 1417 aaPredicted RBP10.66□□□□□ -0.7
ATXN3-236ENST00000556220 ANKRD50Q9ULJ7 1429 aa10.66□□□□□ -0.7
ATXN3-236ENST00000556220 NHSL1Q5SYE7 1610 aa10.66□□□□□ -0.7
ATXN3-236ENST00000556220 METP08581 1390 aa10.65□□□□□ -0.7
ATXN3-236ENST00000556220 ARHGEF1Q92888 912 aaKnown RBP10.65□□□□□ -0.7
ATXN3-236ENST00000556220 BCL9LQ86UU0 1499 aa10.65□□□□□ -0.7
ATXN3-236ENST00000556220 ADGRL3Q9HAR2 1447 aa10.65□□□□□ -0.7
ATXN3-236ENST00000556220 MYO5BQ9ULV0 1848 aa10.64□□□□□ -0.71
ATXN3-236ENST00000556220 SF3B2Q13435 895 aaKnown RBP10.64□□□□□ -0.71
ATXN3-236ENST00000556220 LRCH3Q96II8 777 aa10.64□□□□□ -0.71
ATXN3-236ENST00000556220 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.64□□□□□ -0.71
ATXN3-236ENST00000556220 PTPN23Q9H3S7 1636 aa10.64□□□□□ -0.71
ATXN3-236ENST00000556220 RGS20O76081 388 aa10.63□□□□□ -0.71
ATXN3-236ENST00000556220 ITGBL1O95965 494 aaPredicted RBP10.63□□□□□ -0.71
ATXN3-236ENST00000556220 WBP1LQ9NX94 342 aa10.63□□□□□ -0.71
ATXN3-236ENST00000556220 CROCC2H7BZ55 1655 aa10.63□□□□□ -0.71
ATXN3-236ENST00000556220 GCC2Q8IWJ2 1684 aa10.63□□□□□ -0.71
ATXN3-236ENST00000556220 ADGRL2O95490 1459 aa10.62□□□□□ -0.71
ATXN3-236ENST00000556220 HRCP23327 699 aa10.62□□□□□ -0.71
ATXN3-236ENST00000556220 UNC5CLQ8IV45 518 aa10.62□□□□□ -0.71
ATXN3-236ENST00000556220 RBM27Q9P2N5 1060 aaKnown RBP10.62□□□□□ -0.71
ATXN3-236ENST00000556220 TSR3Q9UJK0 312 aaKnown RBP10.62□□□□□ -0.71
ATXN3-236ENST00000556220 ZNF326Q5BKZ1 582 aaKnown RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms