RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 NBPF1Q3BBV0 1214 aa9.66□□□□□ -0.86
PSEN1-216ENST00000556066 DEFB132Q7Z7B7 95 aa9.66□□□□□ -0.86
PSEN1-216ENST00000556066 NUDT16Q96DE0 195 aaKnown RBP9.66□□□□□ -0.86
PSEN1-216ENST00000556066 CDK19Q9BWU1 502 aa9.66□□□□□ -0.86
PSEN1-216ENST00000556066 A0A0G2JS52 829 aa9.65□□□□□ -0.86
PSEN1-216ENST00000556066 FAM83GA6ND36 823 aa9.65□□□□□ -0.86
PSEN1-216ENST00000556066 MAP3K13O43283 966 aa9.65□□□□□ -0.86
PSEN1-216ENST00000556066 MYT1Q01538 1121 aa9.65□□□□□ -0.86
PSEN1-216ENST00000556066 ATP7BP35670 1465 aa9.65□□□□□ -0.87
PSEN1-216ENST00000556066 NEUROD1Q13562 356 aa9.64□□□□□ -0.87
PSEN1-216ENST00000556066 VPS72Q15906 364 aa9.64□□□□□ -0.87
PSEN1-216ENST00000556066 BTG4Q9NY30 223 aa9.64□□□□□ -0.87
PSEN1-216ENST00000556066 COL14A1Q05707 1796 aaKnown RBP9.64□□□□□ -0.87
PSEN1-216ENST00000556066 CRYBG1Q9Y4K1 1723 aa9.64□□□□□ -0.87
PSEN1-216ENST00000556066 QRICH2Q9H0J4 1663 aa9.64□□□□□ -0.87
PSEN1-216ENST00000556066 BLMP54132 1417 aaPredicted RBP9.64□□□□□ -0.87
PSEN1-216ENST00000556066 NRAPQ86VF7 1730 aa9.63□□□□□ -0.87
PSEN1-216ENST00000556066 SRPK2P78362 688 aaKnown RBP9.63□□□□□ -0.87
PSEN1-216ENST00000556066 NUTM2GQ5VZR2 741 aa9.63□□□□□ -0.87
PSEN1-216ENST00000556066 SEPT12Q8IYM1 358 aa9.63□□□□□ -0.87
PSEN1-216ENST00000556066 L3MBTL2Q969R5 705 aa9.63□□□□□ -0.87
PSEN1-216ENST00000556066 SIN3AQ96ST3 1273 aa9.63□□□□□ -0.87
PSEN1-216ENST00000556066 TOPAZ1Q8N9V7 1692 aa9.63□□□□□ -0.87
PSEN1-216ENST00000556066 ACEP12821 1306 aa9.62□□□□□ -0.87
PSEN1-216ENST00000556066 PRDM11Q9NQV5 511 aa9.62□□□□□ -0.87
PSEN1-216ENST00000556066 CENPJQ9HC77 1338 aaPredicted RBP9.61□□□□□ -0.87
PSEN1-216ENST00000556066 PHRF1Q9P1Y6 1649 aaKnown RBP9.61□□□□□ -0.87
PSEN1-216ENST00000556066 ONECUT3O60422 494 aaPredicted RBP9.61□□□□□ -0.87
PSEN1-216ENST00000556066 FAM98CQ17RN3 349 aaKnown RBP9.61□□□□□ -0.87
PSEN1-216ENST00000556066 NBPF8Q3BBV2 869 aa9.61□□□□□ -0.87
PSEN1-216ENST00000556066 IER5LQ5T953 404 aa9.61□□□□□ -0.87
PSEN1-216ENST00000556066 TRPM1Q7Z4N2 1603 aa9.6□□□□□ -0.87
PSEN1-216ENST00000556066 ZC3H6P61129 1189 aaKnown RBP9.6□□□□□ -0.87
PSEN1-216ENST00000556066 CHRNA2Q15822 529 aa9.6□□□□□ -0.87
PSEN1-216ENST00000556066 LCE2DQ5TA82 110 aaPredicted RBP9.6□□□□□ -0.87
PSEN1-216ENST00000556066 SGIP1Q9BQI5 828 aa9.6□□□□□ -0.87
PSEN1-216ENST00000556066 CABP2Q9NPB3 220 aa9.6□□□□□ -0.87
PSEN1-216ENST00000556066 KIAA0232Q92628 1395 aa9.6□□□□□ -0.87
PSEN1-216ENST00000556066 PPIP5K1Q6PFW1 1433 aa9.59□□□□□ -0.87
PSEN1-216ENST00000556066 TTLL13PA6NNM8 815 aa9.59□□□□□ -0.87
PSEN1-216ENST00000556066 SF3B2Q13435 895 aaKnown RBP9.59□□□□□ -0.87
PSEN1-216ENST00000556066 KRT27Q7Z3Y8 459 aa9.59□□□□□ -0.87
PSEN1-216ENST00000556066 CDAN1Q8IWY9 1227 aa9.59□□□□□ -0.87
PSEN1-216ENST00000556066 ABTB2Q8N961 1025 aa9.59□□□□□ -0.87
PSEN1-216ENST00000556066 STRN4Q9NRL3 753 aa9.59□□□□□ -0.87
PSEN1-216ENST00000556066 POLR3AO14802 1390 aaPredicted RBP9.59□□□□□ -0.87
PSEN1-216ENST00000556066 PLEKHG3A1L390 1219 aa9.58□□□□□ -0.88
PSEN1-216ENST00000556066 PSDA5PKW4 1024 aaPredicted RBP9.58□□□□□ -0.88
PSEN1-216ENST00000556066 PCDHB13Q9Y5F0 798 aa9.58□□□□□ -0.88
PSEN1-216ENST00000556066 ROCK2O75116 1388 aaKnown RBP9.58□□□□□ -0.88
PSEN1-216ENST00000556066 POTEFA5A3E0 1075 aa9.57□□□□□ -0.88
PSEN1-216ENST00000556066 EVA1CP58658 441 aa9.57□□□□□ -0.88
PSEN1-216ENST00000556066 SPATA31A5Q5VU36 1347 aa9.56□□□□□ -0.88
PSEN1-216ENST00000556066 SPATA31A7Q8IWB4 1347 aa9.56□□□□□ -0.88
PSEN1-216ENST00000556066 LRP5O75197 1615 aa9.56□□□□□ -0.88
PSEN1-216ENST00000556066 NRKQ7Z2Y5 1582 aa9.56□□□□□ -0.88
PSEN1-216ENST00000556066 ZBTB7CA1YPR0 619 aa9.56□□□□□ -0.88
PSEN1-216ENST00000556066 NUBP1P53384 320 aa9.56□□□□□ -0.88
PSEN1-216ENST00000556066 FAM182BQ5T319 152 aa9.56□□□□□ -0.88
PSEN1-216ENST00000556066 RASEFQ8IZ41 740 aa9.56□□□□□ -0.88
PSEN1-216ENST00000556066 CABP1Q9NZU7 370 aa9.56□□□□□ -0.88
PSEN1-216ENST00000556066 USP35Q9P2H5 1018 aa9.56□□□□□ -0.88
PSEN1-216ENST00000556066 TRPC6Q9Y210 931 aa9.56□□□□□ -0.88
PSEN1-216ENST00000556066 EVC2Q86UK5 1308 aa9.56□□□□□ -0.88
PSEN1-216ENST00000556066 NLRP13Q86W25 1043 aa9.55□□□□□ -0.88
PSEN1-216ENST00000556066 SLAIN1Q8ND83 568 aa9.55□□□□□ -0.88
PSEN1-216ENST00000556066 TRIM35Q9UPQ4 493 aa9.55□□□□□ -0.88
PSEN1-216ENST00000556066 COLQQ9Y215 455 aaPredicted RBP9.54□□□□□ -0.88
PSEN1-216ENST00000556066 THSD7AQ9UPZ6 1657 aa9.54□□□□□ -0.88
PSEN1-216ENST00000556066 SPATA31A1Q5TZJ5 1347 aa9.54□□□□□ -0.88
PSEN1-216ENST00000556066 RGPD1P0DJD0 1748 aa9.53□□□□□ -0.88
PSEN1-216ENST00000556066 CAMTA1Q9Y6Y1 1673 aa9.53□□□□□ -0.88
PSEN1-216ENST00000556066 ECM2O94769 699 aaPredicted RBP9.53□□□□□ -0.88
PSEN1-216ENST00000556066 GCP02774 474 aa9.53□□□□□ -0.88
PSEN1-216ENST00000556066 BAG6P46379 1132 aa9.53□□□□□ -0.88
PSEN1-216ENST00000556066 NLRP6P59044 892 aa9.53□□□□□ -0.88
PSEN1-216ENST00000556066 CIZ1Q9ULV3 898 aaPredicted RBP9.53□□□□□ -0.88
PSEN1-216ENST00000556066 USP6P35125 1406 aa9.53□□□□□ -0.88
PSEN1-216ENST00000556066 SSH2Q76I76 1423 aa9.53□□□□□ -0.88
PSEN1-216ENST00000556066 USP19O94966 1318 aa9.53□□□□□ -0.88
PSEN1-216ENST00000556066 AKAP12Q02952 1782 aa9.52□□□□□ -0.88
PSEN1-216ENST00000556066 PIK3C2AO00443 1686 aa9.52□□□□□ -0.89
PSEN1-216ENST00000556066 LMO7Q8WWI1 1683 aa9.52□□□□□ -0.89
PSEN1-216ENST00000556066 PLCG2P16885 1265 aa9.52□□□□□ -0.89
PSEN1-216ENST00000556066 EN1Q05925 392 aaPredicted RBP9.52□□□□□ -0.89
PSEN1-216ENST00000556066 LARP1Q6PKG0 1096 aaKnown RBP9.52□□□□□ -0.89
PSEN1-216ENST00000556066 BRD4O60885 1362 aaPredicted RBP9.51□□□□□ -0.89
PSEN1-216ENST00000556066 CPDO75976 1380 aa9.51□□□□□ -0.89
PSEN1-216ENST00000556066 TONSLQ96HA7 1378 aa9.51□□□□□ -0.89
PSEN1-216ENST00000556066 RGPD5Q99666 1765 aa9.51□□□□□ -0.89
PSEN1-216ENST00000556066 SOX12O15370 315 aa9.51□□□□□ -0.89
PSEN1-216ENST00000556066 PDE3BQ13370 1112 aa9.51□□□□□ -0.89
PSEN1-216ENST00000556066 R3HDM1Q15032 1099 aaKnown RBP9.51□□□□□ -0.89
PSEN1-216ENST00000556066 CARD11Q9BXL7 1154 aa9.51□□□□□ -0.89
PSEN1-216ENST00000556066 TNS1Q9HBL0 1735 aaKnown RBP9.51□□□□□ -0.89
PSEN1-216ENST00000556066 GSE1Q14687 1217 aa9.5□□□□□ -0.89
PSEN1-216ENST00000556066 TCP11L2Q8N4U5 519 aa9.5□□□□□ -0.89
PSEN1-216ENST00000556066 COL5A2P05997 1499 aaPredicted RBP9.49□□□□□ -0.89
PSEN1-216ENST00000556066 SNPHO15079 494 aa9.49□□□□□ -0.89
PSEN1-216ENST00000556066 TRIM37O94972 964 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms