RNA–Protein interactions for RNA: ENST00000556011.5

PSEN1-215, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 442 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-215ENST00000556011 METP08581 1390 aa12.96□□□□□ -0.33
PSEN1-215ENST00000556011 ARHGEF5Q12774 1597 aa12.96□□□□□ -0.33
PSEN1-215ENST00000556011 FMN2Q9NZ56 1722 aa12.96□□□□□ -0.34
PSEN1-215ENST00000556011 TUBGCP6Q96RT7 1819 aa12.95□□□□□ -0.34
PSEN1-215ENST00000556011 PNPLA7Q6ZV29 1317 aa12.95□□□□□ -0.34
PSEN1-215ENST00000556011 SLC52A1Q9NWF4 448 aa12.95□□□□□ -0.34
PSEN1-215ENST00000556011 CACNA1GO43497 2377 aa12.94□□□□□ -0.34
PSEN1-215ENST00000556011 CCDC144AA2RUR9 1427 aa12.94□□□□□ -0.34
PSEN1-215ENST00000556011 PLEKHG2Q9H7P9 1386 aa12.94□□□□□ -0.34
PSEN1-215ENST00000556011 PARP4Q9UKK3 1724 aaKnown RBP12.93□□□□□ -0.34
PSEN1-215ENST00000556011 NRXN3Q9Y4C0 1643 aa12.93□□□□□ -0.34
PSEN1-215ENST00000556011 C9orf131Q5VYM1 1079 aa12.93□□□□□ -0.34
PSEN1-215ENST00000556011 ATP7BP35670 1465 aa12.91□□□□□ -0.34
PSEN1-215ENST00000556011 NUTM2FA1L443 756 aa12.91□□□□□ -0.34
PSEN1-215ENST00000556011 CCDC141Q6ZP82 1450 aa12.91□□□□□ -0.34
PSEN1-215ENST00000556011 ARHGAP27Q6ZUM4 889 aa12.9□□□□□ -0.34
PSEN1-215ENST00000556011 HFM1A2PYH4 1435 aa12.89□□□□□ -0.35
PSEN1-215ENST00000556011 RANBP2P49792 3224 aaKnown RBP12.89□□□□□ -0.35
PSEN1-215ENST00000556011 MSL1Q68DK7 614 aa12.89□□□□□ -0.35
PSEN1-215ENST00000556011 AKT1S1Q96B36 256 aa12.89□□□□□ -0.35
PSEN1-215ENST00000556011 COLQQ9Y215 455 aaPredicted RBP12.89□□□□□ -0.35
PSEN1-215ENST00000556011 UNC79Q9P2D8 2635 aa12.88□□□□□ -0.35
PSEN1-215ENST00000556011 BRCA2P51587 3418 aa12.88□□□□□ -0.35
PSEN1-215ENST00000556011 CCNB3Q8WWL7 1395 aa12.88□□□□□ -0.35
PSEN1-215ENST00000556011 CEP290O15078 2479 aa12.87□□□□□ -0.35
PSEN1-215ENST00000556011 VEGFAP15692 232 aaPredicted RBP12.86□□□□□ -0.35
PSEN1-215ENST00000556011 TCP11L2Q8N4U5 519 aa12.86□□□□□ -0.35
PSEN1-215ENST00000556011 ARHGEF10O15013 1369 aa12.85□□□□□ -0.35
PSEN1-215ENST00000556011 BEGAINQ9BUH8 593 aa12.85□□□□□ -0.35
PSEN1-215ENST00000556011 PRDM11Q9NQV5 511 aa12.85□□□□□ -0.35
PSEN1-215ENST00000556011 LRRC4BQ9NT99 713 aa12.85□□□□□ -0.35
PSEN1-215ENST00000556011 LTBP1Q14766 1721 aa12.84□□□□□ -0.35
PSEN1-215ENST00000556011 CCDC18Q5T9S5 1454 aa12.84□□□□□ -0.35
PSEN1-215ENST00000556011 ROBO2Q9HCK4 1378 aa12.83□□□□□ -0.36
PSEN1-215ENST00000556011 TFCP2L1Q9NZI6 479 aa12.83□□□□□ -0.36
PSEN1-215ENST00000556011 PSME1Q06323 249 aa12.82□□□□□ -0.36
PSEN1-215ENST00000556011 CHRNA2Q15822 529 aa12.82□□□□□ -0.36
PSEN1-215ENST00000556011 KIF1AQ12756 1690 aa12.82□□□□□ -0.36
PSEN1-215ENST00000556011 WDR33Q9C0J8 1336 aaKnown RBP12.82□□□□□ -0.36
PSEN1-215ENST00000556011 MUC3AQ02505 3323 aa12.81□□□□□ -0.36
PSEN1-215ENST00000556011 COL26A1Q96A83 441 aa12.81□□□□□ -0.36
PSEN1-215ENST00000556011 PIEZO1Q92508 2521 aa12.8□□□□□ -0.36
PSEN1-215ENST00000556011 MSH5O43196 834 aa12.8□□□□□ -0.36
PSEN1-215ENST00000556011 LARP1Q6PKG0 1096 aaKnown RBP12.8□□□□□ -0.36
PSEN1-215ENST00000556011 CDC42BPGQ6DT37 1551 aa12.8□□□□□ -0.36
PSEN1-215ENST00000556011 LRRC37A3O60309 1634 aa12.8□□□□□ -0.36
PSEN1-215ENST00000556011 SBNO1A3KN83 1393 aa12.8□□□□□ -0.36
PSEN1-215ENST00000556011 SSH2Q76I76 1423 aa12.79□□□□□ -0.36
PSEN1-215ENST00000556011 EVA1CP58658 441 aa12.78□□□□□ -0.36
PSEN1-215ENST00000556011 MARCH10Q8NA82 808 aaPredicted RBP12.78□□□□□ -0.36
PSEN1-215ENST00000556011 RNF181Q9P0P0 153 aa12.78□□□□□ -0.36
PSEN1-215ENST00000556011 BCS1LQ9Y276 419 aa12.78□□□□□ -0.36
PSEN1-215ENST00000556011 AKAP12Q02952 1782 aa12.77□□□□□ -0.36
PSEN1-215ENST00000556011 DEFB115Q30KQ5 88 aa12.77□□□□□ -0.37
PSEN1-215ENST00000556011 TTC28Q96AY4 2481 aa12.77□□□□□ -0.37
PSEN1-215ENST00000556011 LAMB4A4D0S4 1761 aa12.76□□□□□ -0.37
PSEN1-215ENST00000556011 TMEM88BA6NKF7 163 aa12.76□□□□□ -0.37
PSEN1-215ENST00000556011 RASSF10A6NK89 507 aa12.75□□□□□ -0.37
PSEN1-215ENST00000556011 SUPT5HO00267 1087 aaKnown RBP12.75□□□□□ -0.37
PSEN1-215ENST00000556011 BRD4O60885 1362 aaPredicted RBP12.75□□□□□ -0.37
PSEN1-215ENST00000556011 TSPY4P0CV99 314 aa12.75□□□□□ -0.37
PSEN1-215ENST00000556011 TSPY10P0CW01 314 aa12.75□□□□□ -0.37
PSEN1-215ENST00000556011 DDB1Q16531 1140 aa12.75□□□□□ -0.37
PSEN1-215ENST00000556011 CHADLQ6NUI6 762 aa12.75□□□□□ -0.37
PSEN1-215ENST00000556011 THSD7BQ9C0I4 1608 aa12.75□□□□□ -0.37
PSEN1-215ENST00000556011 LAMA2P24043 3122 aaKnown RBP12.75□□□□□ -0.37
PSEN1-215ENST00000556011 SBF1O95248 1867 aa12.74□□□□□ -0.37
PSEN1-215ENST00000556011 BCL9O00512 1426 aa12.74□□□□□ -0.37
PSEN1-215ENST00000556011 THRAP3Q9Y2W1 955 aaKnown RBP12.74□□□□□ -0.37
PSEN1-215ENST00000556011 BAHCC1Q9P281 2608 aa12.74□□□□□ -0.37
PSEN1-215ENST00000556011 CRYBG1Q9Y4K1 1723 aa12.74□□□□□ -0.37
PSEN1-215ENST00000556011 KIAA0232Q92628 1395 aa12.73□□□□□ -0.37
PSEN1-215ENST00000556011 PASKQ96RG2 1323 aa12.73□□□□□ -0.37
PSEN1-215ENST00000556011 COL23A1Q86Y22 540 aaPredicted RBP12.73□□□□□ -0.37
PSEN1-215ENST00000556011 HIRIP3Q9BW71 556 aaPredicted RBP12.73□□□□□ -0.37
PSEN1-215ENST00000556011 RGPD8O14715 1765 aaPredicted RBP12.72□□□□□ -0.37
PSEN1-215ENST00000556011 N4BP2Q86UW6 1770 aaPredicted RBP12.72□□□□□ -0.37
PSEN1-215ENST00000556011 RSPH4AQ5TD94 716 aa12.72□□□□□ -0.37
PSEN1-215ENST00000556011 KNDC1Q76NI1 1749 aa12.71□□□□□ -0.37
PSEN1-215ENST00000556011 POTECB2RU33 542 aa12.71□□□□□ -0.37
PSEN1-215ENST00000556011 PRR36Q9H6K5 1346 aa12.7□□□□□ -0.38
PSEN1-215ENST00000556011 LAMA3Q16787 3333 aa12.7□□□□□ -0.38
PSEN1-215ENST00000556011 PIK3C2AO00443 1686 aa12.7□□□□□ -0.38
PSEN1-215ENST00000556011 SPATA31E1Q6ZUB1 1445 aa12.7□□□□□ -0.38
PSEN1-215ENST00000556011 KANK1Q14678 1352 aa12.69□□□□□ -0.38
PSEN1-215ENST00000556011 POTEIP0CG38 1075 aa12.69□□□□□ -0.38
PSEN1-215ENST00000556011 POTEJP0CG39 1038 aa12.69□□□□□ -0.38
PSEN1-215ENST00000556011 BTAF1O14981 1849 aa12.69□□□□□ -0.38
PSEN1-215ENST00000556011 NHSQ6T4R5 1651 aa12.68□□□□□ -0.38
PSEN1-215ENST00000556011 GLTPD2A6NH11 291 aa12.68□□□□□ -0.38
PSEN1-215ENST00000556011 PPEF1O14829 653 aaPredicted RBP12.68□□□□□ -0.38
PSEN1-215ENST00000556011 CCDC24Q8N4L8 307 aa12.68□□□□□ -0.38
PSEN1-215ENST00000556011 KCNQ4P56696 695 aa12.67□□□□□ -0.38
PSEN1-215ENST00000556011 KIAA1551Q9HCM1 1747 aa12.67□□□□□ -0.38
PSEN1-215ENST00000556011 KAT6BQ8WYB5 2073 aa12.66□□□□□ -0.38
PSEN1-215ENST00000556011 ERBB4Q15303 1308 aa12.66□□□□□ -0.38
PSEN1-215ENST00000556011 NAIPQ13075 1403 aa12.66□□□□□ -0.38
PSEN1-215ENST00000556011 GPR101Q96P66 508 aaPredicted RBP12.66□□□□□ -0.38
PSEN1-215ENST00000556011 PHF8Q9UPP1 1060 aa12.66□□□□□ -0.38
PSEN1-215ENST00000556011 ALS2Q96Q42 1657 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms