RNA–Protein interactions for RNA: ENST00000555737.5

RCCD1-204, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 3,157 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-204ENST00000555737 MIS18AQ9NYP9 233 aa21.94■■□□□ 1.1
RCCD1-204ENST00000555737 POLKQ9UBT6 870 aa21.94■■□□□ 1.1
RCCD1-204ENST00000555737 NME9Q86XW9 330 aa21.94■■□□□ 1.1
RCCD1-204ENST00000555737 ALDH1L2Q3SY69 923 aa21.93■■□□□ 1.1
RCCD1-204ENST00000555737 KIF1BO60333 1816 aa21.92■■□□□ 1.1
RCCD1-204ENST00000555737 FCHSD2O94868 740 aa21.92■■□□□ 1.1
RCCD1-204ENST00000555737 CIZ1Q9ULV3 898 aaPredicted RBP21.92■■□□□ 1.1
RCCD1-204ENST00000555737 R3HCC1Q9Y3T6 440 aaKnown RBP21.92■■□□□ 1.1
RCCD1-204ENST00000555737 NFE2L2Q16236 605 aa21.91■■□□□ 1.1
RCCD1-204ENST00000555737 ZMYND15Q9H091 742 aa21.91■■□□□ 1.1
RCCD1-204ENST00000555737 QRICH2Q9H0J4 1663 aa21.91■■□□□ 1.1
RCCD1-204ENST00000555737 SHROOM2Q13796 1616 aa21.91■■□□□ 1.1
RCCD1-204ENST00000555737 PLEKHM2Q8IWE5 1019 aa21.91■■□□□ 1.1
RCCD1-204ENST00000555737 NECTIN2Q92692 538 aa21.91■■□□□ 1.1
RCCD1-204ENST00000555737 DTNBO60941 627 aa21.9■■□□□ 1.1
RCCD1-204ENST00000555737 XPCQ01831 940 aaPredicted RBP21.9■■□□□ 1.1
RCCD1-204ENST00000555737 FAM13BQ9NYF5 915 aa21.9■■□□□ 1.1
RCCD1-204ENST00000555737 AK9Q5TCS8 1911 aa21.9■■□□□ 1.1
RCCD1-204ENST00000555737 MLECQ14165 292 aa21.9■■□□□ 1.1
RCCD1-204ENST00000555737 ZMYM3Q14202 1370 aa21.89■■□□□ 1.1
RCCD1-204ENST00000555737 GNAI1P63096 354 aa21.89■■□□□ 1.09
RCCD1-204ENST00000555737 MCM10Q7L590 875 aa21.89■■□□□ 1.09
RCCD1-204ENST00000555737 TULP4Q9NRJ4 1543 aa21.88■■□□□ 1.09
RCCD1-204ENST00000555737 IL16Q14005 1332 aa21.88■■□□□ 1.09
RCCD1-204ENST00000555737 PRIM1P49642 420 aaKnown RBP21.87■■□□□ 1.09
RCCD1-204ENST00000555737 ZSCAN23Q3MJ62 389 aa21.87■■□□□ 1.09
RCCD1-204ENST00000555737 PPRC1Q5VV67 1664 aaKnown RBP21.87■■□□□ 1.09
RCCD1-204ENST00000555737 EFCAB6Q5THR3 1501 aa21.86■■□□□ 1.09
RCCD1-204ENST00000555737 NSD2O96028 1365 aa21.86■■□□□ 1.09
RCCD1-204ENST00000555737 SYCE3A1L190 88 aa21.86■■□□□ 1.09
RCCD1-204ENST00000555737 AEBP1Q8IUX7 1158 aa21.86■■□□□ 1.09
RCCD1-204ENST00000555737 RBSNQ9H1K0 784 aa21.86■■□□□ 1.09
RCCD1-204ENST00000555737 SDSP20132 328 aa21.86■■□□□ 1.09
RCCD1-204ENST00000555737 F6X3S4 739 aa21.85■■□□□ 1.09
RCCD1-204ENST00000555737 CCDC173Q0VFZ6 552 aa21.85■■□□□ 1.09
RCCD1-204ENST00000555737 KLHL40Q2TBA0 621 aa21.85■■□□□ 1.09
RCCD1-204ENST00000555737 GDPD2Q9HCC8 539 aa21.85■■□□□ 1.09
RCCD1-204ENST00000555737 MEIS3Q99687 375 aa21.84■■□□□ 1.09
RCCD1-204ENST00000555737 RPGRIP1LQ68CZ1 1315 aa21.84■■□□□ 1.09
RCCD1-204ENST00000555737 NSFL1CQ9UNZ2 370 aaKnown RBP21.84■■□□□ 1.09
RCCD1-204ENST00000555737 NEK4P51957 841 aa21.83■■□□□ 1.09
RCCD1-204ENST00000555737 TTC22Q5TAA0 569 aa21.83■■□□□ 1.09
RCCD1-204ENST00000555737 ZSCAN30Q86W11 494 aa21.83■■□□□ 1.09
RCCD1-204ENST00000555737 RRP9O43818 475 aaKnown RBP21.83■■□□□ 1.09
RCCD1-204ENST00000555737 RABEP1Q15276 862 aa21.83■■□□□ 1.09
RCCD1-204ENST00000555737 ADGRB1O14514 1584 aa21.83■■□□□ 1.08
RCCD1-204ENST00000555737 API5Q9BZZ5 524 aaKnown RBP21.83■■□□□ 1.08
RCCD1-204ENST00000555737 ASXL2Q76L83 1435 aa21.82■■□□□ 1.08
RCCD1-204ENST00000555737 INTS3Q68E01 1043 aaKnown RBP21.82■■□□□ 1.08
RCCD1-204ENST00000555737 RILPL2Q969X0 211 aa21.82■■□□□ 1.08
RCCD1-204ENST00000555737 CHMP4BQ9H444 224 aaKnown RBP21.82■■□□□ 1.08
RCCD1-204ENST00000555737 EXOC6BQ9Y2D4 811 aa21.82■■□□□ 1.08
RCCD1-204ENST00000555737 NCOA3Q9Y6Q9 1424 aa21.82■■□□□ 1.08
RCCD1-204ENST00000555737 PTMAP06454 111 aaKnown RBP21.82■■□□□ 1.08
RCCD1-204ENST00000555737 CASC1Q6TDU7 716 aa21.82■■□□□ 1.08
RCCD1-204ENST00000555737 USP26Q9BXU7 913 aa21.82■■□□□ 1.08
RCCD1-204ENST00000555737 PODXL2Q9NZ53 605 aa21.81■■□□□ 1.08
RCCD1-204ENST00000555737 KIAA1210Q9ULL0 1709 aa21.81■■□□□ 1.08
RCCD1-204ENST00000555737 ST18O60284 1047 aa21.81■■□□□ 1.08
RCCD1-204ENST00000555737 SULT6B1Q6IMI4 303 aa21.81■■□□□ 1.08
RCCD1-204ENST00000555737 LARP6Q9BRS8 491 aaKnown RBP21.81■■□□□ 1.08
RCCD1-204ENST00000555737 TRIM6-TRIM34B2RNG4 842 aa21.81■■□□□ 1.08
RCCD1-204ENST00000555737 PLCB2Q00722 1185 aa21.81■■□□□ 1.08
RCCD1-204ENST00000555737 MROH1Q8NDA8 1641 aa21.8■■□□□ 1.08
RCCD1-204ENST00000555737 LMBRD1Q9NUN5 540 aa21.8■■□□□ 1.08
RCCD1-204ENST00000555737 ISY1Q9ULR0 285 aaKnown RBP21.8■■□□□ 1.08
RCCD1-204ENST00000555737 TXNDC2Q86VQ3 553 aa21.79■■□□□ 1.08
RCCD1-204ENST00000555737 NUCB2P80303 420 aa21.79■■□□□ 1.08
RCCD1-204ENST00000555737 NRXN1Q9ULB1 1477 aa21.79■■□□□ 1.08
RCCD1-204ENST00000555737 IFT57Q9NWB7 429 aa21.79■■□□□ 1.08
RCCD1-204ENST00000555737 ADGRB3O60242 1522 aa21.78■■□□□ 1.08
RCCD1-204ENST00000555737 DEPDC5O75140 1603 aa21.78■■□□□ 1.08
RCCD1-204ENST00000555737 SLC4A2P04920 1241 aa21.78■■□□□ 1.08
RCCD1-204ENST00000555737 GPT2Q8TD30 523 aa21.78■■□□□ 1.08
RCCD1-204ENST00000555737 UPF3BQ9BZI7 483 aaKnown RBP21.78■■□□□ 1.08
RCCD1-204ENST00000555737 GLI2P10070 1586 aa21.78■■□□□ 1.08
RCCD1-204ENST00000555737 PLPPR3Q6T4P5 718 aa21.78■■□□□ 1.08
RCCD1-204ENST00000555737 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.77■■□□□ 1.08
RCCD1-204ENST00000555737 CFAP44Q96MT7 982 aa21.77■■□□□ 1.08
RCCD1-204ENST00000555737 DCTPP1Q9H773 170 aa21.77■■□□□ 1.08
RCCD1-204ENST00000555737 VWDEQ8N2E2 1590 aa21.77■■□□□ 1.08
RCCD1-204ENST00000555737 DNTTIP2Q5QJE6 756 aaKnown RBP21.77■■□□□ 1.07
RCCD1-204ENST00000555737 COG3Q96JB2 828 aa21.76■■□□□ 1.07
RCCD1-204ENST00000555737 ANO2Q9NQ90 1003 aa21.76■■□□□ 1.07
RCCD1-204ENST00000555737 MAP4K4O95819 1239 aaPredicted RBP21.76■■□□□ 1.07
RCCD1-204ENST00000555737 PTMSP20962 102 aa21.76■■□□□ 1.07
RCCD1-204ENST00000555737 ABCC4O15439 1325 aa21.76■■□□□ 1.07
RCCD1-204ENST00000555737 TMEM63CQ9P1W3 806 aa21.75■■□□□ 1.07
RCCD1-204ENST00000555737 INO80Q9ULG1 1556 aaPredicted RBP21.75■■□□□ 1.07
RCCD1-204ENST00000555737 IL13P35225 146 aa21.74■■□□□ 1.07
RCCD1-204ENST00000555737 CEP85Q6P2H3 762 aa21.74■■□□□ 1.07
RCCD1-204ENST00000555737 ARHGAP45Q92619 1136 aa21.73■■□□□ 1.07
RCCD1-204ENST00000555737 LRRC7Q96NW7 1537 aa21.73■■□□□ 1.07
RCCD1-204ENST00000555737 ZDHHC9Q9Y397 364 aa21.73■■□□□ 1.07
RCCD1-204ENST00000555737 G2E3Q7L622 706 aa21.73■■□□□ 1.07
RCCD1-204ENST00000555737 ADGRB2O60241 1585 aa21.72■■□□□ 1.07
RCCD1-204ENST00000555737 FOXO3O43524 673 aa21.72■■□□□ 1.07
RCCD1-204ENST00000555737 ZNF830Q96NB3 372 aaPredicted RBP21.72■■□□□ 1.07
RCCD1-204ENST00000555737 ZNF428Q96B54 188 aa21.71■■□□□ 1.07
RCCD1-204ENST00000555737 COL3A1P02461 1466 aaPredicted RBP21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms