RNA–Protein interactions for RNA: ENST00000555627.1

SIX1-204, Transcript of SIX homeobox 1, humanhuman

TSL 5

Gene SIX1, Length 461 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-204ENST00000555627 ZBED9Q6R2W3 1325 aa12.88□□□□□ -0.35
SIX1-204ENST00000555627 TNS3Q68CZ2 1445 aa12.88□□□□□ -0.35
SIX1-204ENST00000555627 MTHFSP49914 203 aa12.88□□□□□ -0.35
SIX1-204ENST00000555627 HNRNPUQ00839 825 aaKnown RBP eCLIP12.88□□□□□ -0.35
SIX1-204ENST00000555627 POTEHQ6S545 545 aa12.88□□□□□ -0.35
SIX1-204ENST00000555627 ZNF784Q8NCA9 323 aaPredicted RBP12.88□□□□□ -0.35
SIX1-204ENST00000555627 NGDNQ8NEJ9 315 aaKnown RBP12.88□□□□□ -0.35
SIX1-204ENST00000555627 ABCC6O95255 1503 aa12.88□□□□□ -0.35
SIX1-204ENST00000555627 USP19O94966 1318 aa12.87□□□□□ -0.35
SIX1-204ENST00000555627 FBLN1P23142 703 aa12.86□□□□□ -0.35
SIX1-204ENST00000555627 ESCO1Q5FWF5 840 aa12.86□□□□□ -0.35
SIX1-204ENST00000555627 CADPS2Q86UW7 1296 aa12.86□□□□□ -0.35
SIX1-204ENST00000555627 COG3Q96JB2 828 aa12.86□□□□□ -0.35
SIX1-204ENST00000555627 POLKQ9UBT6 870 aa12.86□□□□□ -0.35
SIX1-204ENST00000555627 TRPC5Q9UL62 973 aaPredicted RBP12.86□□□□□ -0.35
SIX1-204ENST00000555627 EMILIN1Q9Y6C2 1016 aa12.86□□□□□ -0.35
SIX1-204ENST00000555627 SBNO1A3KN83 1393 aa12.85□□□□□ -0.35
SIX1-204ENST00000555627 CENPBP07199 599 aaPredicted RBP12.85□□□□□ -0.35
SIX1-204ENST00000555627 LRRC37A3O60309 1634 aa12.84□□□□□ -0.35
SIX1-204ENST00000555627 ATF3P18847 181 aa12.84□□□□□ -0.35
SIX1-204ENST00000555627 USP21Q9UK80 565 aa12.84□□□□□ -0.35
SIX1-204ENST00000555627 ADAMTS8Q9UP79 889 aa12.84□□□□□ -0.35
SIX1-204ENST00000555627 ATRNO75882 1429 aa12.84□□□□□ -0.35
SIX1-204ENST00000555627 RTL1A6NKG5 1358 aa12.83□□□□□ -0.36
SIX1-204ENST00000555627 SF3B2Q13435 895 aaKnown RBP12.83□□□□□ -0.36
SIX1-204ENST00000555627 BRINP3Q76B58 766 aa12.83□□□□□ -0.36
SIX1-204ENST00000555627 WNK3Q9BYP7 1800 aa12.83□□□□□ -0.36
SIX1-204ENST00000555627 ADAMTS2O95450 1211 aa12.82□□□□□ -0.36
SIX1-204ENST00000555627 RRS1Q15050 365 aaKnown RBP12.82□□□□□ -0.36
SIX1-204ENST00000555627 MAP3K19Q56UN5 1328 aa12.82□□□□□ -0.36
SIX1-204ENST00000555627 FLT4P35916 1363 aa12.81□□□□□ -0.36
SIX1-204ENST00000555627 KIF24Q5T7B8 1368 aa12.81□□□□□ -0.36
SIX1-204ENST00000555627 NCAPD2Q15021 1401 aa12.81□□□□□ -0.36
SIX1-204ENST00000555627 FOXO3O43524 673 aa12.81□□□□□ -0.36
SIX1-204ENST00000555627 XPCQ01831 940 aaPredicted RBP12.81□□□□□ -0.36
SIX1-204ENST00000555627 WDR43Q15061 677 aaKnown RBP eCLIP12.81□□□□□ -0.36
SIX1-204ENST00000555627 DDX17Q92841 729 aaKnown RBP12.81□□□□□ -0.36
SIX1-204ENST00000555627 MAPK8IP2Q13387 824 aaPredicted RBP12.8□□□□□ -0.36
SIX1-204ENST00000555627 CFAP53Q96M91 514 aa12.8□□□□□ -0.36
SIX1-204ENST00000555627 NPHP3Q7Z494 1330 aa12.8□□□□□ -0.36
SIX1-204ENST00000555627 ZNF521Q96K83 1311 aa12.8□□□□□ -0.36
SIX1-204ENST00000555627 PLCH1Q4KWH8 1693 aa12.8□□□□□ -0.36
SIX1-204ENST00000555627 DCAF8L1A6NGE4 600 aa12.78□□□□□ -0.36
SIX1-204ENST00000555627 IL13P35225 146 aa12.78□□□□□ -0.36
SIX1-204ENST00000555627 NLRP6P59044 892 aa12.78□□□□□ -0.36
SIX1-204ENST00000555627 R3HDM1Q15032 1099 aaKnown RBP12.78□□□□□ -0.36
SIX1-204ENST00000555627 NUTM2GQ5VZR2 741 aa12.78□□□□□ -0.36
SIX1-204ENST00000555627 KRT28Q7Z3Y7 464 aa12.78□□□□□ -0.36
SIX1-204ENST00000555627 CCDC146Q8IYE0 955 aa12.78□□□□□ -0.36
SIX1-204ENST00000555627 PKD1L3Q7Z443 1732 aa12.78□□□□□ -0.36
SIX1-204ENST00000555627 NRAPQ86VF7 1730 aa12.78□□□□□ -0.36
SIX1-204ENST00000555627 SHANK3Q9BYB0 1731 aa12.78□□□□□ -0.36
SIX1-204ENST00000555627 SOS2Q07890 1332 aaPredicted RBP12.78□□□□□ -0.36
SIX1-204ENST00000555627 SLC34A2O95436 690 aa12.77□□□□□ -0.37
SIX1-204ENST00000555627 ABTB2Q8N961 1025 aa12.77□□□□□ -0.37
SIX1-204ENST00000555627 LRRC59Q96AG4 307 aaKnown RBP12.77□□□□□ -0.37
SIX1-204ENST00000555627 SPATA31A3Q5VYP0 1347 aa12.77□□□□□ -0.37
SIX1-204ENST00000555627 ARHGEF10O15013 1369 aa12.77□□□□□ -0.37
SIX1-204ENST00000555627 DIAPH1O60610 1272 aaKnown RBP12.76□□□□□ -0.37
SIX1-204ENST00000555627 PAK3O75914 559 aaPredicted RBP12.76□□□□□ -0.37
SIX1-204ENST00000555627 PSME1Q06323 249 aa12.76□□□□□ -0.37
SIX1-204ENST00000555627 KDRP35968 1356 aa12.76□□□□□ -0.37
SIX1-204ENST00000555627 ADAMTS7Q9UKP4 1686 aa12.76□□□□□ -0.37
SIX1-204ENST00000555627 SIPA1L3O60292 1781 aaPredicted RBP12.75□□□□□ -0.37
SIX1-204ENST00000555627 EIF4A2Q14240 407 aaKnown RBP12.75□□□□□ -0.37
SIX1-204ENST00000555627 FNBP4Q8N3X1 1017 aaPredicted RBP12.75□□□□□ -0.37
SIX1-204ENST00000555627 PLEKHF1Q96S99 279 aa12.75□□□□□ -0.37
SIX1-204ENST00000555627 RSPH6AQ9H0K4 717 aa12.75□□□□□ -0.37
SIX1-204ENST00000555627 UTRNP46939 3433 aa12.75□□□□□ -0.37
SIX1-204ENST00000555627 COL14A1Q05707 1796 aaKnown RBP12.74□□□□□ -0.37
SIX1-204ENST00000555627 PARP4Q9UKK3 1724 aaKnown RBP12.74□□□□□ -0.37
SIX1-204ENST00000555627 SOX12O15370 315 aa12.74□□□□□ -0.37
SIX1-204ENST00000555627 IGSF1Q8N6C5 1336 aa12.73□□□□□ -0.37
SIX1-204ENST00000555627 HOXC9P31274 260 aa12.73□□□□□ -0.37
SIX1-204ENST00000555627 HSP90AB2PQ58FF8 381 aa12.73□□□□□ -0.37
SIX1-204ENST00000555627 CPDO75976 1380 aa12.72□□□□□ -0.37
SIX1-204ENST00000555627 PPM1GO15355 546 aaPredicted RBP12.72□□□□□ -0.37
SIX1-204ENST00000555627 U2AF1L5P0DN76 240 aaPredicted RBP12.72□□□□□ -0.37
SIX1-204ENST00000555627 U2AF1Q01081 240 aaKnown RBP eCLIP12.72□□□□□ -0.37
SIX1-204ENST00000555627 RUNDC1Q96C34 613 aa12.72□□□□□ -0.37
SIX1-204ENST00000555627 APAF1O14727 1248 aa12.71□□□□□ -0.37
SIX1-204ENST00000555627 U2SURPO15042 1029 aaKnown RBP12.71□□□□□ -0.37
SIX1-204ENST00000555627 BAG6P46379 1132 aa12.71□□□□□ -0.37
SIX1-204ENST00000555627 ARHGEF25Q86VW2 580 aa12.71□□□□□ -0.37
SIX1-204ENST00000555627 SCN11AQ9UI33 1791 aa12.71□□□□□ -0.38
SIX1-204ENST00000555627 NWD2Q9ULI1 1742 aa12.71□□□□□ -0.38
SIX1-204ENST00000555627 AEBP1Q8IUX7 1158 aa12.7□□□□□ -0.38
SIX1-204ENST00000555627 GJD4Q96KN9 370 aaPredicted RBP12.7□□□□□ -0.38
SIX1-204ENST00000555627 NUDCQ9Y266 331 aa12.7□□□□□ -0.38
SIX1-204ENST00000555627 KDM3BQ7LBC6 1761 aa12.7□□□□□ -0.38
SIX1-204ENST00000555627 GCP02774 474 aa12.69□□□□□ -0.38
SIX1-204ENST00000555627 TCP11L2Q8N4U5 519 aa12.69□□□□□ -0.38
SIX1-204ENST00000555627 KCNH5Q8NCM2 988 aa12.69□□□□□ -0.38
SIX1-204ENST00000555627 COL5A2P05997 1499 aaPredicted RBP12.68□□□□□ -0.38
SIX1-204ENST00000555627 PRKAR2BP31323 418 aa12.68□□□□□ -0.38
SIX1-204ENST00000555627 NCBP3Q53F19 620 aaKnown RBP12.68□□□□□ -0.38
SIX1-204ENST00000555627 IP6K1Q92551 441 aa12.68□□□□□ -0.38
SIX1-204ENST00000555627 BRWD3Q6RI45 1802 aa12.67□□□□□ -0.38
SIX1-204ENST00000555627 FCHSD2O94868 740 aa12.67□□□□□ -0.38
SIX1-204ENST00000555627 HMOX1P09601 288 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms