RNA–Protein interactions for RNA: ENST00000555314.1

TMEM253-205, Transcript of transmembrane protein 253, humanhuman

TSL 3

Gene TMEM253, Length 605 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-205ENST00000555314 TOM1L2Q6ZVM7 507 aa18.03■□□□□ 0.48
TMEM253-205ENST00000555314 KCNH5Q8NCM2 988 aa18.03■□□□□ 0.48
TMEM253-205ENST00000555314 PPP1R1BQ9UD71 204 aaPredicted RBP18.03■□□□□ 0.48
TMEM253-205ENST00000555314 DCAF8L1A6NGE4 600 aa18.02■□□□□ 0.48
TMEM253-205ENST00000555314 ARHGEF25Q86VW2 580 aa18.02■□□□□ 0.48
TMEM253-205ENST00000555314 NUP188Q5SRE5 1749 aa18.01■□□□□ 0.47
TMEM253-205ENST00000555314 YY1P25490 414 aa18.01■□□□□ 0.47
TMEM253-205ENST00000555314 CARD10Q9BWT7 1032 aa18.01■□□□□ 0.47
TMEM253-205ENST00000555314 TTC21AQ8NDW8 1320 aa17.99■□□□□ 0.47
TMEM253-205ENST00000555314 CPSF1Q10570 1443 aaKnown RBP17.99■□□□□ 0.47
TMEM253-205ENST00000555314 PEAK1Q9H792 1746 aa17.99■□□□□ 0.47
TMEM253-205ENST00000555314 AXIN2Q9Y2T1 843 aa17.99■□□□□ 0.47
TMEM253-205ENST00000555314 TTC21BQ7Z4L5 1316 aa17.98■□□□□ 0.47
TMEM253-205ENST00000555314 MARCH10Q8NA82 808 aaPredicted RBP17.98■□□□□ 0.47
TMEM253-205ENST00000555314 RGPD3A6NKT7 1758 aaPredicted RBP17.98■□□□□ 0.47
TMEM253-205ENST00000555314 RGPD4Q7Z3J3 1758 aa17.98■□□□□ 0.47
TMEM253-205ENST00000555314 L3MBTL2Q969R5 705 aa17.97■□□□□ 0.47
TMEM253-205ENST00000555314 ZBTB7CA1YPR0 619 aa17.96■□□□□ 0.47
TMEM253-205ENST00000555314 PROM2Q8N271 834 aa17.96■□□□□ 0.47
TMEM253-205ENST00000555314 ANO8Q9HCE9 1232 aaPredicted RBP17.96■□□□□ 0.47
TMEM253-205ENST00000555314 CCDC7Q96M83 1385 aa17.95■□□□□ 0.46
TMEM253-205ENST00000555314 EXOC5O00471 708 aa17.94■□□□□ 0.46
TMEM253-205ENST00000555314 LRRC37A3O60309 1634 aa17.94■□□□□ 0.46
TMEM253-205ENST00000555314 ABCC6O95255 1503 aa17.93■□□□□ 0.46
TMEM253-205ENST00000555314 CSB-PGBD3P0DP91 1061 aa17.93■□□□□ 0.46
TMEM253-205ENST00000555314 COL18A1P39060 1754 aa17.93■□□□□ 0.46
TMEM253-205ENST00000555314 TXNRD1Q16881 649 aa17.92■□□□□ 0.46
TMEM253-205ENST00000555314 PTF1AQ7RTS3 328 aa17.92■□□□□ 0.46
TMEM253-205ENST00000555314 QRICH2Q9H0J4 1663 aa17.92■□□□□ 0.46
TMEM253-205ENST00000555314 PIK3C2AO00443 1686 aa17.91■□□□□ 0.46
TMEM253-205ENST00000555314 PTGER2P43116 358 aa17.91■□□□□ 0.46
TMEM253-205ENST00000555314 STK32BQ9NY57 414 aa17.91■□□□□ 0.46
TMEM253-205ENST00000555314 SBNO2Q9Y2G9 1366 aa17.91■□□□□ 0.46
TMEM253-205ENST00000555314 TRPM1Q7Z4N2 1603 aa17.9■□□□□ 0.46
TMEM253-205ENST00000555314 ROCK2O75116 1388 aaKnown RBP17.9■□□□□ 0.46
TMEM253-205ENST00000555314 USP31Q70CQ4 1352 aa17.9■□□□□ 0.46
TMEM253-205ENST00000555314 SLC15A2Q16348 729 aa17.89■□□□□ 0.45
TMEM253-205ENST00000555314 KTN1Q86UP2 1357 aaKnown RBP17.89■□□□□ 0.45
TMEM253-205ENST00000555314 TNS2Q63HR2 1409 aa17.89■□□□□ 0.45
TMEM253-205ENST00000555314 NFAT5O94916 1531 aa17.88■□□□□ 0.45
TMEM253-205ENST00000555314 SBF2Q86WG5 1849 aa17.87■□□□□ 0.45
TMEM253-205ENST00000555314 MTFR1LQ9H019 292 aa17.87■□□□□ 0.45
TMEM253-205ENST00000555314 ZBTB7AO95365 584 aa17.86■□□□□ 0.45
TMEM253-205ENST00000555314 PDGFDQ9GZP0 370 aaPredicted RBP17.86■□□□□ 0.45
TMEM253-205ENST00000555314 ERBB3P21860 1342 aa17.86■□□□□ 0.45
TMEM253-205ENST00000555314 CASZ1Q86V15 1759 aa17.86■□□□□ 0.45
TMEM253-205ENST00000555314 SGIP1Q9BQI5 828 aa17.85■□□□□ 0.45
TMEM253-205ENST00000555314 SOX12O15370 315 aa17.84■□□□□ 0.45
TMEM253-205ENST00000555314 IL2RBP14784 551 aa17.83■□□□□ 0.44
TMEM253-205ENST00000555314 PUS7Q96PZ0 661 aaKnown RBP17.83■□□□□ 0.44
TMEM253-205ENST00000555314 SYT17Q9BSW7 474 aa17.83■□□□□ 0.44
TMEM253-205ENST00000555314 ATF5Q9Y2D1 282 aaPredicted RBP17.83■□□□□ 0.44
TMEM253-205ENST00000555314 MAP3K5Q99683 1374 aa17.82■□□□□ 0.44
TMEM253-205ENST00000555314 NLRP2Q9NX02 1062 aa17.82■□□□□ 0.44
TMEM253-205ENST00000555314 SIN3AQ96ST3 1273 aa17.81■□□□□ 0.44
TMEM253-205ENST00000555314 WNK3Q9BYP7 1800 aa17.81■□□□□ 0.44
TMEM253-205ENST00000555314 MAPK8IP2Q13387 824 aaPredicted RBP17.8■□□□□ 0.44
TMEM253-205ENST00000555314 HDGFL2Q7Z4V5 671 aaPredicted RBP17.8■□□□□ 0.44
TMEM253-205ENST00000555314 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.8■□□□□ 0.44
TMEM253-205ENST00000555314 FHDC1Q9C0D6 1143 aaPredicted RBP17.8■□□□□ 0.44
TMEM253-205ENST00000555314 AKAP12Q02952 1782 aa17.79■□□□□ 0.44
TMEM253-205ENST00000555314 TERF2IPQ9NYB0 399 aa17.79■□□□□ 0.44
TMEM253-205ENST00000555314 NME9Q86XW9 330 aa17.78■□□□□ 0.44
TMEM253-205ENST00000555314 SLC16A10Q8TF71 515 aa17.78■□□□□ 0.44
TMEM253-205ENST00000555314 EDC4Q6P2E9 1401 aaKnown RBP17.78■□□□□ 0.44
TMEM253-205ENST00000555314 CD163L1Q9NR16 1453 aa17.77■□□□□ 0.44
TMEM253-205ENST00000555314 SLC27A3Q5K4L6 730 aa17.77■□□□□ 0.44
TMEM253-205ENST00000555314 ZNF784Q8NCA9 323 aaPredicted RBP17.77■□□□□ 0.44
TMEM253-205ENST00000555314 ANKRD24Q8TF21 1146 aa17.77■□□□□ 0.44
TMEM253-205ENST00000555314 ARXQ96QS3 562 aa17.77■□□□□ 0.44
TMEM253-205ENST00000555314 UTRNP46939 3433 aa17.76■□□□□ 0.43
TMEM253-205ENST00000555314 ZBTB22O15209 634 aa17.76■□□□□ 0.43
TMEM253-205ENST00000555314 NEUROD1Q13562 356 aa17.76■□□□□ 0.43
TMEM253-205ENST00000555314 IP6K1Q92551 441 aa17.76■□□□□ 0.43
TMEM253-205ENST00000555314 ACSBG1Q96GR2 724 aa17.76■□□□□ 0.43
TMEM253-205ENST00000555314 CARD11Q9BXL7 1154 aa17.76■□□□□ 0.43
TMEM253-205ENST00000555314 USP54Q70EL1 1684 aa17.76■□□□□ 0.43
TMEM253-205ENST00000555314 NHSQ6T4R5 1651 aa17.75■□□□□ 0.43
TMEM253-205ENST00000555314 SLC24A1O60721 1099 aa17.75■□□□□ 0.43
TMEM253-205ENST00000555314 TMC1Q8TDI8 760 aa17.74■□□□□ 0.43
TMEM253-205ENST00000555314 SLC12A5Q9H2X9 1139 aa17.74■□□□□ 0.43
TMEM253-205ENST00000555314 MON2Q7Z3U7 1717 aa17.74■□□□□ 0.43
TMEM253-205ENST00000555314 MYOM1P52179 1685 aa17.74■□□□□ 0.43
TMEM253-205ENST00000555314 AKT1S1Q96B36 256 aa17.73■□□□□ 0.43
TMEM253-205ENST00000555314 LRRC4BQ9NT99 713 aa17.73■□□□□ 0.43
TMEM253-205ENST00000555314 PAPPAQ13219 1627 aa17.72■□□□□ 0.43
TMEM253-205ENST00000555314 RGPD5Q99666 1765 aa17.71■□□□□ 0.43
TMEM253-205ENST00000555314 ZNF827Q17R98 1081 aa17.71■□□□□ 0.43
TMEM253-205ENST00000555314 A0A1W2PP64 1363 aa17.7■□□□□ 0.42
TMEM253-205ENST00000555314 HMGB2P26583 209 aaKnown RBP17.69■□□□□ 0.42
TMEM253-205ENST00000555314 POLD1P28340 1107 aa17.69■□□□□ 0.42
TMEM253-205ENST00000555314 ANKRD36BQ8N2N9 1353 aa17.67■□□□□ 0.42
TMEM253-205ENST00000555314 DDX54Q8TDD1 881 aaKnown RBP17.67■□□□□ 0.42
TMEM253-205ENST00000555314 COG3Q96JB2 828 aa17.67■□□□□ 0.42
TMEM253-205ENST00000555314 CGNL1Q0VF96 1302 aa17.66■□□□□ 0.42
TMEM253-205ENST00000555314 PNPLA7Q6ZV29 1317 aa17.66■□□□□ 0.42
TMEM253-205ENST00000555314 PRIM1P49642 420 aaKnown RBP17.65■□□□□ 0.42
TMEM253-205ENST00000555314 ZCRB1Q8TBF4 217 aaKnown RBP17.65■□□□□ 0.42
TMEM253-205ENST00000555314 TFCP2L1Q9NZI6 479 aa17.65■□□□□ 0.42
TMEM253-205ENST00000555314 MAP3K19Q56UN5 1328 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms