RNA–Protein interactions for RNA: ENST00000555240.1

CASC1-208, Transcript of cancer susceptibility 1, humanhuman

TSL 5

Gene CASC1, Length 467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC1-208ENST00000555240 ZNF330Q9Y3S2 320 aaPredicted RBP6.39□□□□□ -1.39
CASC1-208ENST00000555240 MAP4K5Q9Y4K4 846 aa6.39□□□□□ -1.39
CASC1-208ENST00000555240 CAPN5O15484 640 aaPredicted RBP6.38□□□□□ -1.39
CASC1-208ENST00000555240 GRM5P41594 1212 aa6.38□□□□□ -1.39
CASC1-208ENST00000555240 SMCPP49901 116 aaPredicted RBP6.38□□□□□ -1.39
CASC1-208ENST00000555240 WDR4P57081 412 aaKnown RBP6.38□□□□□ -1.39
CASC1-208ENST00000555240 INSM1Q01101 510 aaPredicted RBP6.38□□□□□ -1.39
CASC1-208ENST00000555240 MCM6Q14566 821 aa6.38□□□□□ -1.39
CASC1-208ENST00000555240 NBPF20Q3BBV1 942 aa6.38□□□□□ -1.39
CASC1-208ENST00000555240 OCSTAMPQ9BR26 566 aa6.38□□□□□ -1.39
CASC1-208ENST00000555240 TBC1D2BQ9UPU7 963 aa6.38□□□□□ -1.39
CASC1-208ENST00000555240 FBXO45P0C2W1 286 aa6.37□□□□□ -1.39
CASC1-208ENST00000555240 FLIIQ13045 1269 aa6.37□□□□□ -1.39
CASC1-208ENST00000555240 NR1H3Q13133 447 aa6.37□□□□□ -1.39
CASC1-208ENST00000555240 KCTD15Q96SI1 283 aaPredicted RBP6.37□□□□□ -1.39
CASC1-208ENST00000555240 PCDHB9Q9Y5E1 797 aa6.37□□□□□ -1.39
CASC1-208ENST00000555240 ABL2P42684 1182 aa6.36□□□□□ -1.39
CASC1-208ENST00000555240 RAB15P59190 212 aa6.36□□□□□ -1.39
CASC1-208ENST00000555240 CCDC116Q8IYX3 515 aa6.36□□□□□ -1.39
CASC1-208ENST00000555240 ZNF592Q92610 1267 aa6.36□□□□□ -1.39
CASC1-208ENST00000555240 GDPD2Q9HCC8 539 aa6.36□□□□□ -1.39
CASC1-208ENST00000555240 RAD21O60216 631 aa6.35□□□□□ -1.39
CASC1-208ENST00000555240 ZIC2O95409 532 aaPredicted RBP6.35□□□□□ -1.39
CASC1-208ENST00000555240 NR3C2P08235 984 aa6.35□□□□□ -1.39
CASC1-208ENST00000555240 DHX9Q08211 1270 aaKnown RBP6.35□□□□□ -1.39
CASC1-208ENST00000555240 EMILIN1Q9Y6C2 1016 aa6.35□□□□□ -1.39
CASC1-208ENST00000555240 TIMP2P16035 220 aa6.34□□□□□ -1.39
CASC1-208ENST00000555240 UBTFP17480 764 aaKnown RBP6.34□□□□□ -1.39
CASC1-208ENST00000555240 WWC1Q8IX03 1113 aa6.34□□□□□ -1.39
CASC1-208ENST00000555240 ITPKCQ96DU7 683 aa6.34□□□□□ -1.39
CASC1-208ENST00000555240 ATP13A2Q9NQ11 1180 aa6.34□□□□□ -1.39
CASC1-208ENST00000555240 PGPEP1Q9NXJ5 209 aa6.34□□□□□ -1.39
CASC1-208ENST00000555240 GPR37L1O60883 481 aa6.33□□□□□ -1.4
CASC1-208ENST00000555240 SNRPBP14678 240 aaKnown RBP6.33□□□□□ -1.4
CASC1-208ENST00000555240 MCCD1P59942 119 aaPredicted RBP6.33□□□□□ -1.4
CASC1-208ENST00000555240 PPP1R26Q5T8A7 1209 aaPredicted RBP6.33□□□□□ -1.4
CASC1-208ENST00000555240 ZFAND3Q9H8U3 227 aa6.33□□□□□ -1.4
CASC1-208ENST00000555240 UPP2O95045 317 aa6.32□□□□□ -1.4
CASC1-208ENST00000555240 BMP1P13497 986 aa6.32□□□□□ -1.4
CASC1-208ENST00000555240 EIF4G2P78344 907 aaKnown RBP eCLIP6.32□□□□□ -1.4
CASC1-208ENST00000555240 INTS6LQ5JSJ4 861 aaKnown RBP6.32□□□□□ -1.4
CASC1-208ENST00000555240 TRIM52Q96A61 297 aa6.32□□□□□ -1.4
CASC1-208ENST00000555240 KLF16Q9BXK1 252 aaPredicted RBP6.32□□□□□ -1.4
CASC1-208ENST00000555240 SENP2Q9HC62 589 aa6.32□□□□□ -1.4
CASC1-208ENST00000555240 TERTO14746 1132 aaKnown RBP6.31□□□□□ -1.4
CASC1-208ENST00000555240 GIGYF1O75420 1035 aaPredicted RBP6.31□□□□□ -1.4
CASC1-208ENST00000555240 VAC14Q08AM6 782 aa6.31□□□□□ -1.4
CASC1-208ENST00000555240 IRF5Q13568 498 aa6.31□□□□□ -1.4
CASC1-208ENST00000555240 SCARF1Q14162 830 aa6.31□□□□□ -1.4
CASC1-208ENST00000555240 WASHC4Q2M389 1173 aa6.31□□□□□ -1.4
CASC1-208ENST00000555240 RNF20Q5VTR2 975 aa6.31□□□□□ -1.4
CASC1-208ENST00000555240 SEPT12Q8IYM1 358 aa6.31□□□□□ -1.4
CASC1-208ENST00000555240 COG6Q9Y2V7 657 aa6.31□□□□□ -1.4
CASC1-208ENST00000555240 MRPL14Q6P1L8 145 aaKnown RBP6.3□□□□□ -1.4
CASC1-208ENST00000555240 KIFC2Q96AC6 838 aa6.3□□□□□ -1.4
CASC1-208ENST00000555240 ESPNB1AK53 854 aa6.29□□□□□ -1.4
CASC1-208ENST00000555240 ERVH48-1M5A8F1 160 aa6.29□□□□□ -1.4
CASC1-208ENST00000555240 POM121Q96HA1 1249 aa6.29□□□□□ -1.4
CASC1-208ENST00000555240 BMP2P12643 396 aa6.28□□□□□ -1.4
CASC1-208ENST00000555240 SEMA3FQ13275 785 aa6.28□□□□□ -1.4
CASC1-208ENST00000555240 C6orf118Q5T5N4 469 aa6.28□□□□□ -1.4
CASC1-208ENST00000555240 TRIM46Q7Z4K8 759 aa6.28□□□□□ -1.4
CASC1-208ENST00000555240 CCDC125Q86Z20 511 aa6.28□□□□□ -1.4
CASC1-208ENST00000555240 MEIOBQ8N635 442 aa6.28□□□□□ -1.4
CASC1-208ENST00000555240 ZNF784Q8NCA9 323 aaPredicted RBP6.28□□□□□ -1.4
CASC1-208ENST00000555240 ZFP42Q96MM3 310 aa6.28□□□□□ -1.4
CASC1-208ENST00000555240 PURBQ96QR8 312 aaKnown RBP6.28□□□□□ -1.4
CASC1-208ENST00000555240 TSEN34Q9BSV6 310 aaKnown RBP6.28□□□□□ -1.4
CASC1-208ENST00000555240 ESF1Q9H501 851 aaKnown RBP6.28□□□□□ -1.4
CASC1-208ENST00000555240 TMPRSS4Q9NRS4 437 aa6.28□□□□□ -1.4
CASC1-208ENST00000555240 LORP23490 312 aaPredicted RBP6.27□□□□□ -1.41
CASC1-208ENST00000555240 CBLBQ13191 982 aa6.27□□□□□ -1.41
CASC1-208ENST00000555240 LINC00528Q8N1L1 170 aa6.27□□□□□ -1.41
CASC1-208ENST00000555240 TRIM47Q96LD4 638 aa6.27□□□□□ -1.41
CASC1-208ENST00000555240 CEP126Q9P2H0 1117 aa6.27□□□□□ -1.41
CASC1-208ENST00000555240 SLFNL1Q499Z3 407 aa6.26□□□□□ -1.41
CASC1-208ENST00000555240 CYLDQ9NQC7 956 aa6.26□□□□□ -1.41
CASC1-208ENST00000555240 PCDHB11Q9Y5F2 797 aa6.26□□□□□ -1.41
CASC1-208ENST00000555240 SOX11P35716 441 aa6.25□□□□□ -1.41
CASC1-208ENST00000555240 Q6ZVU0 165 aa6.25□□□□□ -1.41
CASC1-208ENST00000555240 RELBQ01201 579 aa6.24□□□□□ -1.41
CASC1-208ENST00000555240 RNF135Q8IUD6 432 aa6.24□□□□□ -1.41
CASC1-208ENST00000555240 CLUAP1Q96AJ1 413 aa6.24□□□□□ -1.41
CASC1-208ENST00000555240 AGBL1Q96MI9 1066 aa6.24□□□□□ -1.41
CASC1-208ENST00000555240 ADH1AP07327 375 aa6.23□□□□□ -1.41
CASC1-208ENST00000555240 CC2D2BQ6DHV5 1058 aa6.23□□□□□ -1.41
CASC1-208ENST00000555240 MAN1A2O60476 641 aa6.22□□□□□ -1.41
CASC1-208ENST00000555240 LILRA1O75019 489 aa6.22□□□□□ -1.41
CASC1-208ENST00000555240 MYCP01106 439 aaPredicted RBP6.22□□□□□ -1.41
CASC1-208ENST00000555240 ADD1P35611 737 aaKnown RBP6.22□□□□□ -1.41
CASC1-208ENST00000555240 PROSER2Q86WR7 435 aaPredicted RBP6.22□□□□□ -1.41
CASC1-208ENST00000555240 DOLKQ9UPQ8 538 aa6.22□□□□□ -1.41
CASC1-208ENST00000555240 ATP5J2-PTCD1G3V325 749 aa6.21□□□□□ -1.42
CASC1-208ENST00000555240 GMPRP36959 345 aa6.21□□□□□ -1.42
CASC1-208ENST00000555240 ERVK-9P63128 1117 aa6.21□□□□□ -1.42
CASC1-208ENST00000555240 ZNF395Q9H8N7 513 aaPredicted RBP6.21□□□□□ -1.42
CASC1-208ENST00000555240 POLMQ9NP87 494 aaPredicted RBP6.21□□□□□ -1.42
CASC1-208ENST00000555240 FAM181BA6NEQ2 426 aa6.2□□□□□ -1.42
CASC1-208ENST00000555240 TTLL8A6PVC2 850 aa6.2□□□□□ -1.42
CASC1-208ENST00000555240 SPINT1O43278 529 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms