RNA–Protein interactions for RNA: ENST00000555170.1

TRIM9-204, Transcript of tripartite motif containing 9, humanhuman

TSL 4

Gene TRIM9, Length 554 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM9-204ENST00000555170 PAK3O75914 559 aaPredicted RBP11.82□□□□□ -0.52
TRIM9-204ENST00000555170 CHRNA2Q15822 529 aa11.82□□□□□ -0.52
TRIM9-204ENST00000555170 SLIT3O75094 1523 aa11.81□□□□□ -0.52
TRIM9-204ENST00000555170 A0A1W2PP64 1363 aa11.8□□□□□ -0.52
TRIM9-204ENST00000555170 NUTM2GQ5VZR2 741 aa11.8□□□□□ -0.52
TRIM9-204ENST00000555170 BARGINQ6ZT62 677 aa11.8□□□□□ -0.52
TRIM9-204ENST00000555170 BRD4O60885 1362 aaPredicted RBP11.79□□□□□ -0.52
TRIM9-204ENST00000555170 KTN1Q86UP2 1357 aaKnown RBP11.79□□□□□ -0.52
TRIM9-204ENST00000555170 LMO7Q8WWI1 1683 aa11.79□□□□□ -0.52
TRIM9-204ENST00000555170 HSPA5P11021 654 aaKnown RBP11.79□□□□□ -0.52
TRIM9-204ENST00000555170 PUS7Q96PZ0 661 aaKnown RBP11.79□□□□□ -0.52
TRIM9-204ENST00000555170 SLC12A5Q9H2X9 1139 aa11.79□□□□□ -0.52
TRIM9-204ENST00000555170 USP19O94966 1318 aa11.79□□□□□ -0.52
TRIM9-204ENST00000555170 KIF20BQ96Q89 1820 aa11.79□□□□□ -0.52
TRIM9-204ENST00000555170 KIAA0232Q92628 1395 aa11.79□□□□□ -0.52
TRIM9-204ENST00000555170 CHD4Q14839 1912 aa11.78□□□□□ -0.52
TRIM9-204ENST00000555170 CASZ1Q86V15 1759 aa11.78□□□□□ -0.52
TRIM9-204ENST00000555170 PLSCR1O15162 318 aa11.78□□□□□ -0.52
TRIM9-204ENST00000555170 EVA1CP58658 441 aa11.78□□□□□ -0.52
TRIM9-204ENST00000555170 TMF1P82094 1093 aa11.78□□□□□ -0.52
TRIM9-204ENST00000555170 PTF1AQ7RTS3 328 aa11.78□□□□□ -0.52
TRIM9-204ENST00000555170 PROM2Q8N271 834 aa11.78□□□□□ -0.52
TRIM9-204ENST00000555170 TMC1Q8TDI8 760 aa11.78□□□□□ -0.52
TRIM9-204ENST00000555170 ZC3H6P61129 1189 aaKnown RBP11.77□□□□□ -0.53
TRIM9-204ENST00000555170 LARP1Q6PKG0 1096 aaKnown RBP11.77□□□□□ -0.53
TRIM9-204ENST00000555170 ABTB2Q8N961 1025 aa11.77□□□□□ -0.53
TRIM9-204ENST00000555170 BCL11BQ9C0K0 894 aaPredicted RBP11.77□□□□□ -0.53
TRIM9-204ENST00000555170 TTC21BQ7Z4L5 1316 aa11.77□□□□□ -0.53
TRIM9-204ENST00000555170 EDC4Q6P2E9 1401 aaKnown RBP11.77□□□□□ -0.53
TRIM9-204ENST00000555170 NFAT5O94916 1531 aa11.76□□□□□ -0.53
TRIM9-204ENST00000555170 EIF4G2P78344 907 aaKnown RBP eCLIP11.76□□□□□ -0.53
TRIM9-204ENST00000555170 SGIP1Q9BQI5 828 aa11.76□□□□□ -0.53
TRIM9-204ENST00000555170 LTN1O94822 1766 aa11.76□□□□□ -0.53
TRIM9-204ENST00000555170 COL18A1P39060 1754 aa11.76□□□□□ -0.53
TRIM9-204ENST00000555170 ANKRD36BQ8N2N9 1353 aa11.76□□□□□ -0.53
TRIM9-204ENST00000555170 RGPD5Q99666 1765 aa11.75□□□□□ -0.53
TRIM9-204ENST00000555170 GPR162Q16538 588 aa11.75□□□□□ -0.53
TRIM9-204ENST00000555170 TCP11L2Q8N4U5 519 aa11.75□□□□□ -0.53
TRIM9-204ENST00000555170 ZNF692Q9BU19 519 aaPredicted RBP11.75□□□□□ -0.53
TRIM9-204ENST00000555170 SLC24A1O60721 1099 aa11.74□□□□□ -0.53
TRIM9-204ENST00000555170 TTC21AQ8NDW8 1320 aa11.74□□□□□ -0.53
TRIM9-204ENST00000555170 OVOS2A0A0J9YW53 1432 aa11.74□□□□□ -0.53
TRIM9-204ENST00000555170 OVOS2Q6IE36 1432 aa11.74□□□□□ -0.53
TRIM9-204ENST00000555170 HDGFL2Q7Z4V5 671 aaPredicted RBP11.73□□□□□ -0.53
TRIM9-204ENST00000555170 NME9Q86XW9 330 aa11.73□□□□□ -0.53
TRIM9-204ENST00000555170 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.73□□□□□ -0.53
TRIM9-204ENST00000555170 ARXQ96QS3 562 aa11.73□□□□□ -0.53
TRIM9-204ENST00000555170 MTFR1LQ9H019 292 aa11.73□□□□□ -0.53
TRIM9-204ENST00000555170 CPDO75976 1380 aa11.72□□□□□ -0.53
TRIM9-204ENST00000555170 USP31Q70CQ4 1352 aa11.72□□□□□ -0.53
TRIM9-204ENST00000555170 C11orf95C9JLR9 678 aaPredicted RBP11.72□□□□□ -0.53
TRIM9-204ENST00000555170 NLRP6P59044 892 aa11.72□□□□□ -0.53
TRIM9-204ENST00000555170 SLC15A2Q16348 729 aa11.72□□□□□ -0.53
TRIM9-204ENST00000555170 NLRP13Q86W25 1043 aa11.72□□□□□ -0.53
TRIM9-204ENST00000555170 STK32BQ9NY57 414 aa11.72□□□□□ -0.53
TRIM9-204ENST00000555170 TERF2IPQ9NYB0 399 aa11.72□□□□□ -0.53
TRIM9-204ENST00000555170 ANKRD26Q9UPS8 1709 aa11.72□□□□□ -0.53
TRIM9-204ENST00000555170 GOLGB1Q14789 3259 aaKnown RBP11.71□□□□□ -0.53
TRIM9-204ENST00000555170 CDCA8Q53HL2 280 aa11.71□□□□□ -0.53
TRIM9-204ENST00000555170 WNK3Q9BYP7 1800 aa11.7□□□□□ -0.54
TRIM9-204ENST00000555170 GCP02774 474 aa11.7□□□□□ -0.54
TRIM9-204ENST00000555170 TXNRD1Q16881 649 aa11.7□□□□□ -0.54
TRIM9-204ENST00000555170 THRAP3Q9Y2W1 955 aaKnown RBP11.7□□□□□ -0.54
TRIM9-204ENST00000555170 NSD3Q9BZ95 1437 aa11.69□□□□□ -0.54
TRIM9-204ENST00000555170 PELP1Q8IZL8 1130 aaKnown RBP11.69□□□□□ -0.54
TRIM9-204ENST00000555170 POLR3GLQ9BT43 218 aa11.69□□□□□ -0.54
TRIM9-204ENST00000555170 COL5A2P05997 1499 aaPredicted RBP11.69□□□□□ -0.54
TRIM9-204ENST00000555170 OVOS2A0A0G2JMS6 1433 aa11.69□□□□□ -0.54
TRIM9-204ENST00000555170 SOX12O15370 315 aa11.68□□□□□ -0.54
TRIM9-204ENST00000555170 CARD14Q9BXL6 1004 aa11.68□□□□□ -0.54
TRIM9-204ENST00000555170 ABCC6O95255 1503 aa11.68□□□□□ -0.54
TRIM9-204ENST00000555170 KIF7Q2M1P5 1343 aa11.67□□□□□ -0.54
TRIM9-204ENST00000555170 SHANK3Q9BYB0 1731 aa11.67□□□□□ -0.54
TRIM9-204ENST00000555170 PEAK1Q9H792 1746 aa11.67□□□□□ -0.54
TRIM9-204ENST00000555170 HSPA6P17066 643 aa11.67□□□□□ -0.54
TRIM9-204ENST00000555170 RGPD3A6NKT7 1758 aaPredicted RBP11.67□□□□□ -0.54
TRIM9-204ENST00000555170 RGPD4Q7Z3J3 1758 aa11.67□□□□□ -0.54
TRIM9-204ENST00000555170 MAP3K5Q99683 1374 aa11.67□□□□□ -0.54
TRIM9-204ENST00000555170 ZBTB7CA1YPR0 619 aa11.66□□□□□ -0.54
TRIM9-204ENST00000555170 DDB1Q16531 1140 aa11.66□□□□□ -0.54
TRIM9-204ENST00000555170 KLHL34Q8N239 644 aa11.66□□□□□ -0.54
TRIM9-204ENST00000555170 MARCH10Q8NA82 808 aaPredicted RBP11.66□□□□□ -0.54
TRIM9-204ENST00000555170 AATKQ6ZMQ8 1374 aa11.66□□□□□ -0.54
TRIM9-204ENST00000555170 ARHGEF25Q86VW2 580 aa11.65□□□□□ -0.54
TRIM9-204ENST00000555170 KCNH5Q8NCM2 988 aa11.65□□□□□ -0.54
TRIM9-204ENST00000555170 SBF2Q86WG5 1849 aa11.65□□□□□ -0.55
TRIM9-204ENST00000555170 PARP4Q9UKK3 1724 aaKnown RBP11.64□□□□□ -0.55
TRIM9-204ENST00000555170 FYB1O15117 783 aa11.64□□□□□ -0.55
TRIM9-204ENST00000555170 GGNBP2Q9H3C7 697 aa11.64□□□□□ -0.55
TRIM9-204ENST00000555170 CCDC7Q96M83 1385 aa11.64□□□□□ -0.55
TRIM9-204ENST00000555170 RGPD2P0DJD1 1756 aa11.64□□□□□ -0.55
TRIM9-204ENST00000555170 FAM208AQ9UK61 1670 aaKnown RBP11.63□□□□□ -0.55
TRIM9-204ENST00000555170 AXIN2Q9Y2T1 843 aa11.63□□□□□ -0.55
TRIM9-204ENST00000555170 LRRC37A3O60309 1634 aa11.63□□□□□ -0.55
TRIM9-204ENST00000555170 FBLN1P23142 703 aa11.62□□□□□ -0.55
TRIM9-204ENST00000555170 NLGN2Q8NFZ4 835 aa11.62□□□□□ -0.55
TRIM9-204ENST00000555170 COG3Q96JB2 828 aa11.62□□□□□ -0.55
TRIM9-204ENST00000555170 MAP2P11137 1827 aaKnown RBP11.62□□□□□ -0.55
TRIM9-204ENST00000555170 WASHC2AQ641Q2 1341 aa11.61□□□□□ -0.55
TRIM9-204ENST00000555170 CRB1P82279 1406 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms