RNA–Protein interactions for RNA: ENST00000555094.5

GABRB3-208, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 1,494 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-208ENST00000555094 SLAIN2Q9P270 581 aa14.38□□□□□ -0.11
GABRB3-208ENST00000555094 EIF4A2Q14240 407 aaKnown RBP14.37□□□□□ -0.11
GABRB3-208ENST00000555094 PLEKHF1Q96S99 279 aa14.37□□□□□ -0.11
GABRB3-208ENST00000555094 PDE3BQ13370 1112 aa14.36□□□□□ -0.11
GABRB3-208ENST00000555094 NGEFQ8N5V2 710 aa14.36□□□□□ -0.11
GABRB3-208ENST00000555094 RSPH6AQ9H0K4 717 aa14.36□□□□□ -0.11
GABRB3-208ENST00000555094 ROBO1Q9Y6N7 1651 aa14.36□□□□□ -0.11
GABRB3-208ENST00000555094 HSP90AB2PQ58FF8 381 aa14.35□□□□□ -0.11
GABRB3-208ENST00000555094 TCP11L2Q8N4U5 519 aa14.34□□□□□ -0.11
GABRB3-208ENST00000555094 KCNH5Q8NCM2 988 aa14.34□□□□□ -0.11
GABRB3-208ENST00000555094 ARHGEF10O15013 1369 aa14.34□□□□□ -0.11
GABRB3-208ENST00000555094 FCHSD2O94868 740 aa14.33□□□□□ -0.12
GABRB3-208ENST00000555094 HOXC9P31274 260 aa14.33□□□□□ -0.12
GABRB3-208ENST00000555094 AMPHP49418 695 aa14.33□□□□□ -0.12
GABRB3-208ENST00000555094 SPATA31A3Q5VYP0 1347 aa14.33□□□□□ -0.12
GABRB3-208ENST00000555094 AHDC1Q5TGY3 1603 aaPredicted RBP14.33□□□□□ -0.12
GABRB3-208ENST00000555094 CAMTA1Q9Y6Y1 1673 aa14.33□□□□□ -0.12
GABRB3-208ENST00000555094 DLG5Q8TDM6 1919 aa14.33□□□□□ -0.12
GABRB3-208ENST00000555094 COL18A1P39060 1754 aa14.32□□□□□ -0.12
GABRB3-208ENST00000555094 ABCC6O95255 1503 aa14.32□□□□□ -0.12
GABRB3-208ENST00000555094 SOS2Q07890 1332 aaPredicted RBP14.32□□□□□ -0.12
GABRB3-208ENST00000555094 LMOD2Q6P5Q4 547 aa14.32□□□□□ -0.12
GABRB3-208ENST00000555094 GTF3C3Q9Y5Q9 886 aa14.32□□□□□ -0.12
GABRB3-208ENST00000555094 RGPD5Q99666 1765 aa14.32□□□□□ -0.12
GABRB3-208ENST00000555094 MAPK8IP3Q9UPT6 1336 aa14.32□□□□□ -0.12
GABRB3-208ENST00000555094 PRKAR2BP31323 418 aa14.31□□□□□ -0.12
GABRB3-208ENST00000555094 CDCA7LQ96GN5 454 aa14.31□□□□□ -0.12
GABRB3-208ENST00000555094 RGPD2P0DJD1 1756 aa14.31□□□□□ -0.12
GABRB3-208ENST00000555094 GCP02774 474 aa14.31□□□□□ -0.12
GABRB3-208ENST00000555094 HMOX1P09601 288 aa14.31□□□□□ -0.12
GABRB3-208ENST00000555094 PNNQ9H307 717 aaKnown RBP14.31□□□□□ -0.12
GABRB3-208ENST00000555094 RRP7AQ9Y3A4 280 aaKnown RBP14.31□□□□□ -0.12
GABRB3-208ENST00000555094 KDRP35968 1356 aa14.3□□□□□ -0.12
GABRB3-208ENST00000555094 IGSF1Q8N6C5 1336 aa14.3□□□□□ -0.12
GABRB3-208ENST00000555094 CCDC27Q2M243 656 aa14.3□□□□□ -0.12
GABRB3-208ENST00000555094 ARHGEF25Q86VW2 580 aa14.3□□□□□ -0.12
GABRB3-208ENST00000555094 TMPOP42166 694 aaKnown RBP14.29□□□□□ -0.12
GABRB3-208ENST00000555094 AEBP1Q8IUX7 1158 aa14.29□□□□□ -0.12
GABRB3-208ENST00000555094 WWC1Q8IX03 1113 aa14.29□□□□□ -0.12
GABRB3-208ENST00000555094 IP6K1Q92551 441 aa14.29□□□□□ -0.12
GABRB3-208ENST00000555094 LMO7Q8WWI1 1683 aa14.28□□□□□ -0.12
GABRB3-208ENST00000555094 GOLGA2Q08379 1002 aa14.28□□□□□ -0.12
GABRB3-208ENST00000555094 CERKQ8TCT0 537 aa14.28□□□□□ -0.12
GABRB3-208ENST00000555094 FAM208AQ9UK61 1670 aaKnown RBP14.28□□□□□ -0.12
GABRB3-208ENST00000555094 NEUROD2Q15784 382 aa14.27□□□□□ -0.12
GABRB3-208ENST00000555094 COL22A1Q8NFW1 1626 aaPredicted RBP14.27□□□□□ -0.13
GABRB3-208ENST00000555094 NCAPD2Q15021 1401 aa14.27□□□□□ -0.13
GABRB3-208ENST00000555094 PLEKHG5O94827 1062 aa14.26□□□□□ -0.13
GABRB3-208ENST00000555094 SLFN5Q08AF3 891 aa14.26□□□□□ -0.13
GABRB3-208ENST00000555094 DUSP27Q5VZP5 1158 aa14.26□□□□□ -0.13
GABRB3-208ENST00000555094 SULT6B1Q6IMI4 303 aa14.26□□□□□ -0.13
GABRB3-208ENST00000555094 TRMT2AQ8IZ69 625 aaKnown RBP14.26□□□□□ -0.13
GABRB3-208ENST00000555094 PHACTR3Q96KR7 559 aa14.26□□□□□ -0.13
GABRB3-208ENST00000555094 SPINK5Q9NQ38 1064 aaPredicted RBP14.26□□□□□ -0.13
GABRB3-208ENST00000555094 COL16A1Q07092 1604 aaPredicted RBP14.26□□□□□ -0.13
GABRB3-208ENST00000555094 PHLPP1O60346 1717 aa14.25□□□□□ -0.13
GABRB3-208ENST00000555094 NFE2L2Q16236 605 aa14.25□□□□□ -0.13
GABRB3-208ENST00000555094 EYA1Q99502 592 aa14.25□□□□□ -0.13
GABRB3-208ENST00000555094 TRIM35Q9UPQ4 493 aa14.25□□□□□ -0.13
GABRB3-208ENST00000555094 CPDO75976 1380 aa14.25□□□□□ -0.13
GABRB3-208ENST00000555094 ZBTB7CA1YPR0 619 aa14.25□□□□□ -0.13
GABRB3-208ENST00000555094 SUPT16HQ9Y5B9 1047 aaKnown RBP14.25□□□□□ -0.13
GABRB3-208ENST00000555094 E9PSI1 815 aa14.24□□□□□ -0.13
GABRB3-208ENST00000555094 NEFMP07197 916 aa14.24□□□□□ -0.13
GABRB3-208ENST00000555094 WDR63Q8IWG1 891 aa14.24□□□□□ -0.13
GABRB3-208ENST00000555094 CABLES1Q8TDN4 633 aa14.24□□□□□ -0.13
GABRB3-208ENST00000555094 LRRC37A3O60309 1634 aa14.23□□□□□ -0.13
GABRB3-208ENST00000555094 RIPK4P57078 832 aa14.23□□□□□ -0.13
GABRB3-208ENST00000555094 ZC3H6P61129 1189 aaKnown RBP14.23□□□□□ -0.13
GABRB3-208ENST00000555094 LTV1Q96GA3 475 aaPredicted RBP14.23□□□□□ -0.13
GABRB3-208ENST00000555094 RNF123Q5XPI4 1314 aa14.22□□□□□ -0.13
GABRB3-208ENST00000555094 KIAA0232Q92628 1395 aa14.22□□□□□ -0.13
GABRB3-208ENST00000555094 AXIN2Q9Y2T1 843 aa14.21□□□□□ -0.13
GABRB3-208ENST00000555094 IL16Q14005 1332 aa14.21□□□□□ -0.14
GABRB3-208ENST00000555094 ANKRD24Q8TF21 1146 aa14.2□□□□□ -0.14
GABRB3-208ENST00000555094 FOXD4L1Q9NU39 408 aa14.2□□□□□ -0.14
GABRB3-208ENST00000555094 ERBB3P21860 1342 aa14.2□□□□□ -0.14
GABRB3-208ENST00000555094 USHBP1Q8N6Y0 703 aa14.19□□□□□ -0.14
GABRB3-208ENST00000555094 RCAN3Q9UKA8 241 aa14.19□□□□□ -0.14
GABRB3-208ENST00000555094 NEFLP07196 543 aa14.18□□□□□ -0.14
GABRB3-208ENST00000555094 NBPF6Q5VWK0 638 aa14.18□□□□□ -0.14
GABRB3-208ENST00000555094 LRRC59Q96AG4 307 aaKnown RBP14.18□□□□□ -0.14
GABRB3-208ENST00000555094 NBPF4Q96M43 638 aa14.18□□□□□ -0.14
GABRB3-208ENST00000555094 LMOD3Q0VAK6 560 aa14.18□□□□□ -0.14
GABRB3-208ENST00000555094 FKBP8Q14318 412 aa14.17□□□□□ -0.14
GABRB3-208ENST00000555094 CHRNA2Q15822 529 aa14.17□□□□□ -0.14
GABRB3-208ENST00000555094 FANCIQ9NVI1 1328 aa14.17□□□□□ -0.14
GABRB3-208ENST00000555094 COL14A1Q05707 1796 aaKnown RBP14.16□□□□□ -0.14
GABRB3-208ENST00000555094 VIRMAQ69YN4 1812 aaKnown RBP14.16□□□□□ -0.14
GABRB3-208ENST00000555094 COL5A2P05997 1499 aaPredicted RBP14.16□□□□□ -0.14
GABRB3-208ENST00000555094 MTHFSDQ2M296 383 aaKnown RBP14.16□□□□□ -0.14
GABRB3-208ENST00000555094 MYH16Q9H6N6 1097 aa14.16□□□□□ -0.14
GABRB3-208ENST00000555094 PKD1L3Q7Z443 1732 aa14.15□□□□□ -0.14
GABRB3-208ENST00000555094 TOM1O60784 492 aa14.15□□□□□ -0.14
GABRB3-208ENST00000555094 THUMPD2Q9BTF0 503 aaKnown RBP14.15□□□□□ -0.14
GABRB3-208ENST00000555094 RRP1P56182 461 aaKnown RBP14.14□□□□□ -0.15
GABRB3-208ENST00000555094 GAS2L2Q8NHY3 880 aa14.14□□□□□ -0.15
GABRB3-208ENST00000555094 PRDM11Q9NQV5 511 aa14.14□□□□□ -0.15
GABRB3-208ENST00000555094 PARP4Q9UKK3 1724 aaKnown RBP14.14□□□□□ -0.15
GABRB3-208ENST00000555094 PLCH1Q4KWH8 1693 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms