RNA–Protein interactions for RNA: ENST00000554732.5

LINC00639-202, long intergenic non-protein coding RNA 639, humanhuman

TSL 1 (best)

Gene LINC00639, Length 4,364 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00639-202ENST00000554732 FERMT3Q86UX7 667 aa16.4■□□□□ 0.22
LINC00639-202ENST00000554732 SSH1Q8WYL5 1049 aa16.4■□□□□ 0.22
LINC00639-202ENST00000554732 NOL10Q9BSC4 688 aaKnown RBP16.4■□□□□ 0.22
LINC00639-202ENST00000554732 GGNBP2Q9H3C7 697 aa16.4■□□□□ 0.22
LINC00639-202ENST00000554732 ANKRD30BQ9BXX2 1392 aa16.39■□□□□ 0.21
LINC00639-202ENST00000554732 DIAPH1O60610 1272 aaKnown RBP16.39■□□□□ 0.21
LINC00639-202ENST00000554732 ZBTB9Q96C00 473 aa16.39■□□□□ 0.21
LINC00639-202ENST00000554732 TMCO3Q6UWJ1 677 aa16.39■□□□□ 0.21
LINC00639-202ENST00000554732 STAC3Q96MF2 364 aa16.39■□□□□ 0.21
LINC00639-202ENST00000554732 LARP6Q9BRS8 491 aaKnown RBP16.38■□□□□ 0.21
LINC00639-202ENST00000554732 TSPYL1Q9H0U9 437 aa16.38■□□□□ 0.21
LINC00639-202ENST00000554732 CCDC183Q5T5S1 534 aa16.38■□□□□ 0.21
LINC00639-202ENST00000554732 CKAP2LQ8IYA6 745 aa16.38■□□□□ 0.21
LINC00639-202ENST00000554732 MINK1Q8N4C8 1332 aaPredicted RBP16.37■□□□□ 0.21
LINC00639-202ENST00000554732 RAPGEF3O95398 923 aa16.37■□□□□ 0.21
LINC00639-202ENST00000554732 WDR63Q8IWG1 891 aa16.37■□□□□ 0.21
LINC00639-202ENST00000554732 SMC5Q8IY18 1101 aa16.37■□□□□ 0.21
LINC00639-202ENST00000554732 RLBP1P12271 317 aa16.37■□□□□ 0.21
LINC00639-202ENST00000554732 IBSPP21815 317 aaPredicted RBP16.37■□□□□ 0.21
LINC00639-202ENST00000554732 HSP90AB3PQ58FF7 597 aa16.37■□□□□ 0.21
LINC00639-202ENST00000554732 GPATCH3Q96I76 525 aa16.37■□□□□ 0.21
LINC00639-202ENST00000554732 NUP62CLQ9H1M0 184 aa16.37■□□□□ 0.21
LINC00639-202ENST00000554732 PLEKHH2Q8IVE3 1493 aa16.37■□□□□ 0.21
LINC00639-202ENST00000554732 GIMAP6Q6P9H5 292 aa16.37■□□□□ 0.21
LINC00639-202ENST00000554732 DHX37Q8IY37 1157 aaKnown RBP16.37■□□□□ 0.21
LINC00639-202ENST00000554732 ROCK1Q13464 1354 aa16.37■□□□□ 0.21
LINC00639-202ENST00000554732 CFAP70Q5T0N1 1121 aa16.36■□□□□ 0.21
LINC00639-202ENST00000554732 ABCC5O15440 1437 aa16.36■□□□□ 0.21
LINC00639-202ENST00000554732 TERF1P54274 439 aa16.36■□□□□ 0.21
LINC00639-202ENST00000554732 TRIM27P14373 513 aa16.36■□□□□ 0.21
LINC00639-202ENST00000554732 LMOD3Q0VAK6 560 aa16.36■□□□□ 0.21
LINC00639-202ENST00000554732 TOMM22Q9NS69 142 aa16.36■□□□□ 0.21
LINC00639-202ENST00000554732 EVC2Q86UK5 1308 aa16.36■□□□□ 0.21
LINC00639-202ENST00000554732 TMEM132EQ6IEE7 984 aa16.36■□□□□ 0.21
LINC00639-202ENST00000554732 MYRIPQ8NFW9 859 aa16.36■□□□□ 0.21
LINC00639-202ENST00000554732 KIF18AQ8NI77 898 aa16.36■□□□□ 0.21
LINC00639-202ENST00000554732 SPINK5Q9NQ38 1064 aaPredicted RBP16.35■□□□□ 0.21
LINC00639-202ENST00000554732 SMARCA5O60264 1052 aaPredicted RBP16.35■□□□□ 0.21
LINC00639-202ENST00000554732 SLC12A5Q9H2X9 1139 aa16.35■□□□□ 0.21
LINC00639-202ENST00000554732 ZGPATQ8N5A5 531 aaKnown RBP16.34■□□□□ 0.21
LINC00639-202ENST00000554732 KINO60870 393 aaKnown RBP16.34■□□□□ 0.21
LINC00639-202ENST00000554732 MAP3K11Q16584 847 aa16.34■□□□□ 0.21
LINC00639-202ENST00000554732 RDXP35241 583 aaKnown RBP16.33■□□□□ 0.21
LINC00639-202ENST00000554732 KRT85P78386 507 aa16.33■□□□□ 0.21
LINC00639-202ENST00000554732 RUFY2Q8WXA3 655 aa16.33■□□□□ 0.21
LINC00639-202ENST00000554732 SNX21Q969T3 373 aa16.33■□□□□ 0.21
LINC00639-202ENST00000554732 MAP4K4O95819 1239 aaPredicted RBP16.33■□□□□ 0.2
LINC00639-202ENST00000554732 PTPN23Q9H3S7 1636 aa16.33■□□□□ 0.2
LINC00639-202ENST00000554732 GTF2A1P52655 376 aaPredicted RBP16.33■□□□□ 0.2
LINC00639-202ENST00000554732 DMTNQ08495 405 aa16.33■□□□□ 0.2
LINC00639-202ENST00000554732 CCDC186Q7Z3E2 898 aa16.33■□□□□ 0.2
LINC00639-202ENST00000554732 BMP2KLQ5H9B9 411 aa16.33■□□□□ 0.2
LINC00639-202ENST00000554732 AXDND1Q5T1B0 1012 aaPredicted RBP16.33■□□□□ 0.2
LINC00639-202ENST00000554732 LARP1BQ659C4 914 aaKnown RBP16.33■□□□□ 0.2
LINC00639-202ENST00000554732 CLIP2Q9UDT6 1046 aa16.33■□□□□ 0.2
LINC00639-202ENST00000554732 RIOK3O14730 519 aaKnown RBP16.32■□□□□ 0.2
LINC00639-202ENST00000554732 CERS3Q8IU89 383 aa16.32■□□□□ 0.2
LINC00639-202ENST00000554732 NGDNQ8NEJ9 315 aaKnown RBP16.32■□□□□ 0.2
LINC00639-202ENST00000554732 TMX1Q9H3N1 280 aa16.32■□□□□ 0.2
LINC00639-202ENST00000554732 ACBD3Q9H3P7 528 aa16.32■□□□□ 0.2
LINC00639-202ENST00000554732 DHX29Q7Z478 1369 aaKnown RBP16.32■□□□□ 0.2
LINC00639-202ENST00000554732 PLEKHH1Q9ULM0 1364 aa16.32■□□□□ 0.2
LINC00639-202ENST00000554732 FKBP5Q13451 457 aaPredicted RBP16.32■□□□□ 0.2
LINC00639-202ENST00000554732 NAT10Q9H0A0 1025 aaKnown RBP16.32■□□□□ 0.2
LINC00639-202ENST00000554732 URI1O94763 535 aaPredicted RBP16.31■□□□□ 0.2
LINC00639-202ENST00000554732 GNAI1P63096 354 aa16.31■□□□□ 0.2
LINC00639-202ENST00000554732 STK3Q13188 491 aa16.31■□□□□ 0.2
LINC00639-202ENST00000554732 C10orf67Q8IYJ2 551 aa16.31■□□□□ 0.2
LINC00639-202ENST00000554732 OGFRQ9NZT2 677 aa16.31■□□□□ 0.2
LINC00639-202ENST00000554732 CAMSAP2Q08AD1 1489 aa16.31■□□□□ 0.2
LINC00639-202ENST00000554732 CCDC102AQ96A19 550 aa16.31■□□□□ 0.2
LINC00639-202ENST00000554732 LMAN1P49257 510 aa16.31■□□□□ 0.2
LINC00639-202ENST00000554732 DDX54Q8TDD1 881 aaKnown RBP16.31■□□□□ 0.2
LINC00639-202ENST00000554732 BCL2L12Q9HB09 334 aa16.31■□□□□ 0.2
LINC00639-202ENST00000554732 CEP135Q66GS9 1140 aa16.3■□□□□ 0.2
LINC00639-202ENST00000554732 TWISTNBQ3B726 338 aaPredicted RBP16.3■□□□□ 0.2
LINC00639-202ENST00000554732 PPP1R9BQ96SB3 815 aa16.3■□□□□ 0.2
LINC00639-202ENST00000554732 BMS1Q14692 1282 aaKnown RBP16.3■□□□□ 0.2
LINC00639-202ENST00000554732 ERBINQ96RT1 1412 aa16.29■□□□□ 0.2
LINC00639-202ENST00000554732 FEZ1Q99689 392 aa16.29■□□□□ 0.2
LINC00639-202ENST00000554732 SPATA32Q96LK8 384 aa16.29■□□□□ 0.2
LINC00639-202ENST00000554732 ANTXR1Q9H6X2 564 aa16.29■□□□□ 0.2
LINC00639-202ENST00000554732 PRKAR2BP31323 418 aa16.28■□□□□ 0.2
LINC00639-202ENST00000554732 CCDC141Q6ZP82 1450 aa16.28■□□□□ 0.2
LINC00639-202ENST00000554732 THOC2Q8NI27 1593 aaKnown RBP16.28■□□□□ 0.2
LINC00639-202ENST00000554732 TAF7LQ5H9L4 462 aa16.28■□□□□ 0.2
LINC00639-202ENST00000554732 GTF3C6Q969F1 213 aa16.28■□□□□ 0.2
LINC00639-202ENST00000554732 ZNF500O60304 480 aaPredicted RBP16.27■□□□□ 0.2
LINC00639-202ENST00000554732 UVSSAQ2YD98 709 aa16.27■□□□□ 0.2
LINC00639-202ENST00000554732 PTPRKQ15262 1439 aa16.27■□□□□ 0.2
LINC00639-202ENST00000554732 USP48Q86UV5 1035 aa16.27■□□□□ 0.2
LINC00639-202ENST00000554732 CCDC83Q8IWF9 413 aa16.27■□□□□ 0.2
LINC00639-202ENST00000554732 TPM1P09493 284 aa16.27■□□□□ 0.19
LINC00639-202ENST00000554732 PTGS1P23219 599 aa16.27■□□□□ 0.19
LINC00639-202ENST00000554732 THUMPD2Q9BTF0 503 aaKnown RBP16.27■□□□□ 0.19
LINC00639-202ENST00000554732 PDCP20941 246 aa16.26■□□□□ 0.19
LINC00639-202ENST00000554732 TMX3Q96JJ7 454 aa16.26■□□□□ 0.19
LINC00639-202ENST00000554732 RUFY1Q96T51 708 aa16.26■□□□□ 0.19
LINC00639-202ENST00000554732 CHAMP1Q96JM3 812 aa16.26■□□□□ 0.19
LINC00639-202ENST00000554732 SURF6O75683 361 aaKnown RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms