RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 PRR20BP86481 221 aa10.17□□□□□ -0.78
SCFD1-211ENST00000554437 PRR20AP86496 221 aa10.17□□□□□ -0.78
SCFD1-211ENST00000554437 HDGFL1Q5TGJ6 251 aa10.17□□□□□ -0.78
SCFD1-211ENST00000554437 NBPF20Q3BBV1 942 aa10.16□□□□□ -0.78
SCFD1-211ENST00000554437 MPNDQ8N594 471 aa10.16□□□□□ -0.78
SCFD1-211ENST00000554437 CDK15Q96Q40 435 aa10.16□□□□□ -0.78
SCFD1-211ENST00000554437 ALG2Q9H553 416 aa10.16□□□□□ -0.78
SCFD1-211ENST00000554437 MAP4K5Q9Y4K4 846 aa10.16□□□□□ -0.78
SCFD1-211ENST00000554437 POTECB2RU33 542 aa10.15□□□□□ -0.78
SCFD1-211ENST00000554437 GLMNQ92990 594 aa10.15□□□□□ -0.78
SCFD1-211ENST00000554437 CALR3Q96L12 384 aaKnown RBP10.15□□□□□ -0.78
SCFD1-211ENST00000554437 ARID3CA6NKF2 412 aa10.14□□□□□ -0.79
SCFD1-211ENST00000554437 SUPT5HO00267 1087 aaKnown RBP10.14□□□□□ -0.79
SCFD1-211ENST00000554437 ADAMTS19Q8TE59 1207 aa10.14□□□□□ -0.79
SCFD1-211ENST00000554437 KCTD15Q96SI1 283 aaPredicted RBP10.14□□□□□ -0.79
SCFD1-211ENST00000554437 TOR4AQ9NXH8 423 aa10.14□□□□□ -0.79
SCFD1-211ENST00000554437 CEP126Q9P2H0 1117 aa10.14□□□□□ -0.79
SCFD1-211ENST00000554437 WASF2Q9Y6W5 498 aa10.14□□□□□ -0.79
SCFD1-211ENST00000554437 J3QL48 77 aa10.13□□□□□ -0.79
SCFD1-211ENST00000554437 GIGYF1O75420 1035 aaPredicted RBP10.13□□□□□ -0.79
SCFD1-211ENST00000554437 ADH1CP00326 375 aa10.13□□□□□ -0.79
SCFD1-211ENST00000554437 FSHRP23945 695 aa10.12□□□□□ -0.79
SCFD1-211ENST00000554437 GRM5P41594 1212 aa10.12□□□□□ -0.79
SCFD1-211ENST00000554437 RAB15P59190 212 aa10.12□□□□□ -0.79
SCFD1-211ENST00000554437 SLFNL1Q499Z3 407 aa10.11□□□□□ -0.79
SCFD1-211ENST00000554437 NR5A1Q13285 461 aa10.1□□□□□ -0.79
SCFD1-211ENST00000554437 ESPNB1AK53 854 aa10.09□□□□□ -0.79
SCFD1-211ENST00000554437 SMPD1P17405 629 aa10.09□□□□□ -0.79
SCFD1-211ENST00000554437 INTS6LQ5JSJ4 861 aaKnown RBP10.09□□□□□ -0.79
SCFD1-211ENST00000554437 RNF20Q5VTR2 975 aa10.09□□□□□ -0.79
SCFD1-211ENST00000554437 MYT1Q01538 1121 aa10.08□□□□□ -0.8
SCFD1-211ENST00000554437 NNTQ13423 1086 aa10.08□□□□□ -0.8
SCFD1-211ENST00000554437 LCE2AQ5TA79 106 aaPredicted RBP10.08□□□□□ -0.8
SCFD1-211ENST00000554437 RNF135Q8IUD6 432 aa10.08□□□□□ -0.8
SCFD1-211ENST00000554437 SEPT12Q8IYM1 358 aa10.08□□□□□ -0.8
SCFD1-211ENST00000554437 FAM187AA6NFU0 413 aa10.07□□□□□ -0.8
SCFD1-211ENST00000554437 NR3C2P08235 984 aa10.07□□□□□ -0.8
SCFD1-211ENST00000554437 DHX9Q08211 1270 aaKnown RBP10.06□□□□□ -0.8
SCFD1-211ENST00000554437 TREML4Q6UXN2 200 aa10.06□□□□□ -0.8
SCFD1-211ENST00000554437 CCDC116Q8IYX3 515 aa10.06□□□□□ -0.8
SCFD1-211ENST00000554437 PHTF2Q8N3S3 785 aa10.06□□□□□ -0.8
SCFD1-211ENST00000554437 PIK3CDO00329 1044 aa10.05□□□□□ -0.8
SCFD1-211ENST00000554437 C1orf115Q9H7X2 142 aa10.05□□□□□ -0.8
SCFD1-211ENST00000554437 ERVH48-1M5A8F1 160 aa10.04□□□□□ -0.8
SCFD1-211ENST00000554437 SKIP12755 728 aa10.04□□□□□ -0.8
SCFD1-211ENST00000554437 PPP1R26Q5T8A7 1209 aaPredicted RBP10.04□□□□□ -0.8
SCFD1-211ENST00000554437 CCDC125Q86Z20 511 aa10.04□□□□□ -0.8
SCFD1-211ENST00000554437 HPS1Q92902 700 aa10.04□□□□□ -0.8
SCFD1-211ENST00000554437 CCDC97Q96F63 343 aaPredicted RBP10.04□□□□□ -0.8
SCFD1-211ENST00000554437 UCN2Q96RP3 112 aa10.04□□□□□ -0.8
SCFD1-211ENST00000554437 PCDHB11Q9Y5F2 797 aa10.04□□□□□ -0.8
SCFD1-211ENST00000554437 TSGA10IPQ3SY00 556 aa10.03□□□□□ -0.8
SCFD1-211ENST00000554437 PKDCCQ504Y2 493 aa10.03□□□□□ -0.8
SCFD1-211ENST00000554437 TBC1D9Q6ZT07 1266 aa10.03□□□□□ -0.8
SCFD1-211ENST00000554437 CCDC85AQ96PX6 553 aaPredicted RBP10.03□□□□□ -0.8
SCFD1-211ENST00000554437 PLPP7Q8NBV4 271 aa10.02□□□□□ -0.81
SCFD1-211ENST00000554437 NFATC2IPQ8NCF5 419 aa10.02□□□□□ -0.81
SCFD1-211ENST00000554437 TMPRSS4Q9NRS4 437 aa10.02□□□□□ -0.81
SCFD1-211ENST00000554437 TFIP11Q9UBB9 837 aaKnown RBP10.02□□□□□ -0.81
SCFD1-211ENST00000554437 SERPINA10Q9UK55 444 aa10.02□□□□□ -0.81
SCFD1-211ENST00000554437 DOLKQ9UPQ8 538 aa10.02□□□□□ -0.81
SCFD1-211ENST00000554437 EMILIN1Q9Y6C2 1016 aa10.02□□□□□ -0.81
SCFD1-211ENST00000554437 WDR4P57081 412 aaKnown RBP10.01□□□□□ -0.81
SCFD1-211ENST00000554437 CCDC82Q8N4S0 544 aa10.01□□□□□ -0.81
SCFD1-211ENST00000554437 PPP1R12CQ9BZL4 782 aa10.01□□□□□ -0.81
SCFD1-211ENST00000554437 PGPEP1Q9NXJ5 209 aa10.01□□□□□ -0.81
SCFD1-211ENST00000554437 ATP9BO43861 1147 aa10□□□□□ -0.81
SCFD1-211ENST00000554437 DGAT1O75907 488 aa10□□□□□ -0.81
SCFD1-211ENST00000554437 ZIC2O95409 532 aaPredicted RBP10□□□□□ -0.81
SCFD1-211ENST00000554437 MAP7D1Q3KQU3 841 aa10□□□□□ -0.81
SCFD1-211ENST00000554437 OXLD1Q5BKU9 147 aa10□□□□□ -0.81
SCFD1-211ENST00000554437 CHIC2Q9UKJ5 165 aa10□□□□□ -0.81
SCFD1-211ENST00000554437 PALM3A6NDB9 673 aaPredicted RBP9.99□□□□□ -0.81
SCFD1-211ENST00000554437 TRIM52Q96A61 297 aa9.99□□□□□ -0.81
SCFD1-211ENST00000554437 ITPKCQ96DU7 683 aa9.99□□□□□ -0.81
SCFD1-211ENST00000554437 CDCA7Q9BWT1 371 aaPredicted RBP9.99□□□□□ -0.81
SCFD1-211ENST00000554437 USP17L5A8MUK1 530 aa9.98□□□□□ -0.81
SCFD1-211ENST00000554437 DEPDC4Q8N2C3 294 aa9.98□□□□□ -0.81
SCFD1-211ENST00000554437 ZNF784Q8NCA9 323 aaPredicted RBP9.98□□□□□ -0.81
SCFD1-211ENST00000554437 KLF16Q9BXK1 252 aaPredicted RBP9.98□□□□□ -0.81
SCFD1-211ENST00000554437 ESF1Q9H501 851 aaKnown RBP9.98□□□□□ -0.81
SCFD1-211ENST00000554437 ZFAND3Q9H8U3 227 aa9.98□□□□□ -0.81
SCFD1-211ENST00000554437 CYLDQ9NQC7 956 aa9.98□□□□□ -0.81
SCFD1-211ENST00000554437 TIMP2P16035 220 aa9.97□□□□□ -0.81
SCFD1-211ENST00000554437 ARID3AQ99856 593 aa9.97□□□□□ -0.81
SCFD1-211ENST00000554437 CAPN5O15484 640 aaPredicted RBP9.96□□□□□ -0.82
SCFD1-211ENST00000554437 AVPP01185 164 aa9.96□□□□□ -0.82
SCFD1-211ENST00000554437 LMOD1P29536 600 aaPredicted RBP9.96□□□□□ -0.82
SCFD1-211ENST00000554437 USP4Q13107 963 aa9.96□□□□□ -0.82
SCFD1-211ENST00000554437 NCOA4Q13772 614 aa9.96□□□□□ -0.82
SCFD1-211ENST00000554437 EML3Q32P44 896 aa9.96□□□□□ -0.82
SCFD1-211ENST00000554437 MAFBQ9Y5Q3 323 aaPredicted RBP9.96□□□□□ -0.82
SCFD1-211ENST00000554437 USP17L3A6NCW0 530 aa9.95□□□□□ -0.82
SCFD1-211ENST00000554437 USP17L4A6NCW7 530 aa9.95□□□□□ -0.82
SCFD1-211ENST00000554437 LZTS3O60299 673 aaPredicted RBP9.95□□□□□ -0.82
SCFD1-211ENST00000554437 MYCP01106 439 aaPredicted RBP9.95□□□□□ -0.82
SCFD1-211ENST00000554437 RFX1P22670 979 aa9.95□□□□□ -0.82
SCFD1-211ENST00000554437 SCTRP47872 440 aa9.95□□□□□ -0.82
SCFD1-211ENST00000554437 CC2D2BQ6DHV5 1058 aa9.95□□□□□ -0.82
SCFD1-211ENST00000554437 USP17L2Q6R6M4 530 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms