RNA–Protein interactions for RNA: ENST00000554196.1

LINC00520-202, long intergenic non-protein coding RNA 520, humanhuman

TSL 3 BASIC

Gene LINC00520, Length 514 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00520-202ENST00000554196 ATF3P18847 181 aa12.06□□□□□ -0.48
LINC00520-202ENST00000554196 HAP1P54257 671 aaPredicted RBP12.06□□□□□ -0.48
LINC00520-202ENST00000554196 ESCO1Q5FWF5 840 aa12.06□□□□□ -0.48
LINC00520-202ENST00000554196 CADPS2Q86UW7 1296 aa12.06□□□□□ -0.48
LINC00520-202ENST00000554196 EMILIN1Q9Y6C2 1016 aa12.06□□□□□ -0.48
LINC00520-202ENST00000554196 VIRMAQ69YN4 1812 aaKnown RBP12.06□□□□□ -0.48
LINC00520-202ENST00000554196 TCP11L2Q8N4U5 519 aa12.05□□□□□ -0.48
LINC00520-202ENST00000554196 ZRANB1Q9UGI0 708 aa12.05□□□□□ -0.48
LINC00520-202ENST00000554196 SALL2Q9Y467 1007 aaPredicted RBP12.05□□□□□ -0.48
LINC00520-202ENST00000554196 ABCA3Q99758 1704 aa12.05□□□□□ -0.48
LINC00520-202ENST00000554196 IL13P35225 146 aa12.04□□□□□ -0.48
LINC00520-202ENST00000554196 WDR63Q8IWG1 891 aa12.04□□□□□ -0.48
LINC00520-202ENST00000554196 RGPD5Q99666 1765 aa12.04□□□□□ -0.48
LINC00520-202ENST00000554196 RGPD2P0DJD1 1756 aa12.03□□□□□ -0.48
LINC00520-202ENST00000554196 PPM1GO15355 546 aaPredicted RBP12.03□□□□□ -0.48
LINC00520-202ENST00000554196 NLRP6P59044 892 aa12.03□□□□□ -0.48
LINC00520-202ENST00000554196 PSME1Q06323 249 aa12.03□□□□□ -0.48
LINC00520-202ENST00000554196 SLFN5Q08AF3 891 aa12.03□□□□□ -0.48
LINC00520-202ENST00000554196 RRS1Q15050 365 aaKnown RBP12.03□□□□□ -0.48
LINC00520-202ENST00000554196 ABTB2Q8N961 1025 aa12.03□□□□□ -0.48
LINC00520-202ENST00000554196 PLEKHF1Q96S99 279 aa12.03□□□□□ -0.48
LINC00520-202ENST00000554196 RCAN3Q9UKA8 241 aa12.03□□□□□ -0.48
LINC00520-202ENST00000554196 LRRC37A3O60309 1634 aa12.02□□□□□ -0.49
LINC00520-202ENST00000554196 ATXN8OSP0DMR3 200 aa12.02□□□□□ -0.49
LINC00520-202ENST00000554196 DUSP27Q5VZP5 1158 aa12.02□□□□□ -0.49
LINC00520-202ENST00000554196 WWC1Q8IX03 1113 aa12.02□□□□□ -0.49
LINC00520-202ENST00000554196 KCNH5Q8NCM2 988 aa12.02□□□□□ -0.49
LINC00520-202ENST00000554196 RSPH6AQ9H0K4 717 aa12.02□□□□□ -0.49
LINC00520-202ENST00000554196 IL16Q14005 1332 aa12.02□□□□□ -0.49
LINC00520-202ENST00000554196 MAP3K19Q56UN5 1328 aa12.02□□□□□ -0.49
LINC00520-202ENST00000554196 TNS3Q68CZ2 1445 aa12.02□□□□□ -0.49
LINC00520-202ENST00000554196 PXDNQ92626 1479 aa12.02□□□□□ -0.49
LINC00520-202ENST00000554196 PAK3O75914 559 aaPredicted RBP12.01□□□□□ -0.49
LINC00520-202ENST00000554196 TRMT2AQ8IZ69 625 aaKnown RBP12.01□□□□□ -0.49
LINC00520-202ENST00000554196 PELP1Q8IZL8 1130 aaKnown RBP12.01□□□□□ -0.49
LINC00520-202ENST00000554196 RBM33Q96EV2 1170 aaKnown RBP12.01□□□□□ -0.49
LINC00520-202ENST00000554196 CDCA7LQ96GN5 454 aa12.01□□□□□ -0.49
LINC00520-202ENST00000554196 USP19O94966 1318 aa12.01□□□□□ -0.49
LINC00520-202ENST00000554196 NPHP3Q7Z494 1330 aa12.01□□□□□ -0.49
LINC00520-202ENST00000554196 TMPOP42166 694 aaKnown RBP12□□□□□ -0.49
LINC00520-202ENST00000554196 LMOD3Q0VAK6 560 aa12□□□□□ -0.49
LINC00520-202ENST00000554196 MYH16Q9H6N6 1097 aa12□□□□□ -0.49
LINC00520-202ENST00000554196 KDRP35968 1356 aa12□□□□□ -0.49
LINC00520-202ENST00000554196 CACNA1FO60840 1977 aa11.99□□□□□ -0.49
LINC00520-202ENST00000554196 SENP3-EIF4A1A0A087X0R7 540 aa11.99□□□□□ -0.49
LINC00520-202ENST00000554196 PRKAR2BP31323 418 aa11.99□□□□□ -0.49
LINC00520-202ENST00000554196 AMPHP49418 695 aa11.99□□□□□ -0.49
LINC00520-202ENST00000554196 RRP1P56182 461 aaKnown RBP11.99□□□□□ -0.49
LINC00520-202ENST00000554196 CALD1Q05682 793 aaKnown RBP11.99□□□□□ -0.49
LINC00520-202ENST00000554196 EIF4A2Q14240 407 aaKnown RBP11.99□□□□□ -0.49
LINC00520-202ENST00000554196 ORAI2Q96SN7 254 aa11.99□□□□□ -0.49
LINC00520-202ENST00000554196 LMO7Q8WWI1 1683 aa11.99□□□□□ -0.49
LINC00520-202ENST00000554196 COL18A1P39060 1754 aa11.99□□□□□ -0.49
LINC00520-202ENST00000554196 NFE2L2Q16236 605 aa11.98□□□□□ -0.49
LINC00520-202ENST00000554196 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.98□□□□□ -0.49
LINC00520-202ENST00000554196 U3KPZ7 1027 aaPredicted RBP11.98□□□□□ -0.49
LINC00520-202ENST00000554196 IGSF1Q8N6C5 1336 aa11.97□□□□□ -0.49
LINC00520-202ENST00000554196 ZNF335Q9H4Z2 1342 aaPredicted RBP11.97□□□□□ -0.49
LINC00520-202ENST00000554196 CT47B1P0C2W7 299 aaPredicted RBP11.97□□□□□ -0.49
LINC00520-202ENST00000554196 FBLN1P23142 703 aa11.97□□□□□ -0.49
LINC00520-202ENST00000554196 KRT28Q7Z3Y7 464 aa11.97□□□□□ -0.49
LINC00520-202ENST00000554196 NCAPD2Q15021 1401 aa11.96□□□□□ -0.49
LINC00520-202ENST00000554196 FOXO3O43524 673 aa11.96□□□□□ -0.49
LINC00520-202ENST00000554196 HOXC9P31274 260 aa11.96□□□□□ -0.49
LINC00520-202ENST00000554196 RRP7AQ9Y3A4 280 aaKnown RBP11.96□□□□□ -0.49
LINC00520-202ENST00000554196 PLEKHG2Q9H7P9 1386 aa11.95□□□□□ -0.5
LINC00520-202ENST00000554196 SOX12O15370 315 aa11.95□□□□□ -0.5
LINC00520-202ENST00000554196 NEUROD2Q15784 382 aa11.95□□□□□ -0.5
LINC00520-202ENST00000554196 HSP90AB2PQ58FF8 381 aa11.95□□□□□ -0.5
LINC00520-202ENST00000554196 PPP4R2Q9NY27 417 aa11.95□□□□□ -0.5
LINC00520-202ENST00000554196 AHDC1Q5TGY3 1603 aaPredicted RBP11.95□□□□□ -0.5
LINC00520-202ENST00000554196 LTBP4Q8N2S1 1624 aa11.95□□□□□ -0.5
LINC00520-202ENST00000554196 ROBO1Q9Y6N7 1651 aa11.94□□□□□ -0.5
LINC00520-202ENST00000554196 HMOX1P09601 288 aa11.94□□□□□ -0.5
LINC00520-202ENST00000554196 RIPK4P57078 832 aa11.94□□□□□ -0.5
LINC00520-202ENST00000554196 PARP4Q9UKK3 1724 aaKnown RBP11.94□□□□□ -0.5
LINC00520-202ENST00000554196 COL22A1Q8NFW1 1626 aaPredicted RBP11.93□□□□□ -0.5
LINC00520-202ENST00000554196 NUTM2GQ5VZR2 741 aa11.93□□□□□ -0.5
LINC00520-202ENST00000554196 SULT6B1Q6IMI4 303 aa11.93□□□□□ -0.5
LINC00520-202ENST00000554196 IP6K1Q92551 441 aa11.93□□□□□ -0.5
LINC00520-202ENST00000554196 DAXXQ9UER7 740 aaPredicted RBP11.93□□□□□ -0.5
LINC00520-202ENST00000554196 TRIM35Q9UPQ4 493 aa11.93□□□□□ -0.5
LINC00520-202ENST00000554196 PKD1L3Q7Z443 1732 aa11.92□□□□□ -0.5
LINC00520-202ENST00000554196 FANCIQ9NVI1 1328 aa11.91□□□□□ -0.5
LINC00520-202ENST00000554196 BRINP3Q76B58 766 aa11.91□□□□□ -0.5
LINC00520-202ENST00000554196 VSIG10Q8N0Z9 540 aa11.91□□□□□ -0.5
LINC00520-202ENST00000554196 GAS2L2Q8NHY3 880 aa11.91□□□□□ -0.5
LINC00520-202ENST00000554196 SPINK5Q9NQ38 1064 aaPredicted RBP11.91□□□□□ -0.5
LINC00520-202ENST00000554196 KDM3BQ7LBC6 1761 aa11.91□□□□□ -0.5
LINC00520-202ENST00000554196 CPDO75976 1380 aa11.91□□□□□ -0.5
LINC00520-202ENST00000554196 ADAMTS7Q9UKP4 1686 aa11.91□□□□□ -0.5
LINC00520-202ENST00000554196 SPATA31A3Q5VYP0 1347 aa11.9□□□□□ -0.5
LINC00520-202ENST00000554196 SIPA1L3O60292 1781 aaPredicted RBP11.9□□□□□ -0.5
LINC00520-202ENST00000554196 GCP02774 474 aa11.9□□□□□ -0.5
LINC00520-202ENST00000554196 GNAI1P63096 354 aa11.9□□□□□ -0.5
LINC00520-202ENST00000554196 IRX6P78412 446 aaPredicted RBP11.9□□□□□ -0.5
LINC00520-202ENST00000554196 ARHGEF25Q86VW2 580 aa11.9□□□□□ -0.5
LINC00520-202ENST00000554196 ZNF428Q96B54 188 aa11.9□□□□□ -0.5
LINC00520-202ENST00000554196 IFT57Q9NWB7 429 aa11.9□□□□□ -0.5
LINC00520-202ENST00000554196 SCN11AQ9UI33 1791 aa11.9□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms