RNA–Protein interactions for RNA: ENST00000554035.5

RDH11-206, Transcript of retinol dehydrogenase 11, humanhuman

TSL 3

Gene RDH11, Length 849 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-206ENST00000554035 U2AF1Q01081 240 aaKnown RBP eCLIP11.82□□□□□ -0.52
RDH11-206ENST00000554035 KCNH5Q8NCM2 988 aa11.82□□□□□ -0.52
RDH11-206ENST00000554035 PEAK1Q9H792 1746 aa11.82□□□□□ -0.52
RDH11-206ENST00000554035 MAP3K19Q56UN5 1328 aa11.82□□□□□ -0.52
RDH11-206ENST00000554035 ZNF521Q96K83 1311 aa11.82□□□□□ -0.52
RDH11-206ENST00000554035 PXDNQ92626 1479 aa11.82□□□□□ -0.52
RDH11-206ENST00000554035 RTL1A6NKG5 1358 aa11.81□□□□□ -0.52
RDH11-206ENST00000554035 FLT4P35916 1363 aa11.81□□□□□ -0.52
RDH11-206ENST00000554035 BRINP3Q76B58 766 aa11.81□□□□□ -0.52
RDH11-206ENST00000554035 PHRF1Q9P1Y6 1649 aaKnown RBP11.81□□□□□ -0.52
RDH11-206ENST00000554035 PPM1GO15355 546 aaPredicted RBP11.8□□□□□ -0.52
RDH11-206ENST00000554035 FCHSD2O94868 740 aa11.8□□□□□ -0.52
RDH11-206ENST00000554035 CCDC146Q8IYE0 955 aa11.8□□□□□ -0.52
RDH11-206ENST00000554035 PELP1Q8IZL8 1130 aaKnown RBP11.8□□□□□ -0.52
RDH11-206ENST00000554035 PLEKHF1Q96S99 279 aa11.8□□□□□ -0.52
RDH11-206ENST00000554035 TNS3Q68CZ2 1445 aa11.79□□□□□ -0.52
RDH11-206ENST00000554035 APAF1O14727 1248 aa11.79□□□□□ -0.52
RDH11-206ENST00000554035 U2SURPO15042 1029 aaKnown RBP11.79□□□□□ -0.52
RDH11-206ENST00000554035 MED1Q15648 1581 aaPredicted RBP11.79□□□□□ -0.52
RDH11-206ENST00000554035 ARHGEF10O15013 1369 aa11.79□□□□□ -0.52
RDH11-206ENST00000554035 RGPD1P0DJD0 1748 aa11.78□□□□□ -0.52
RDH11-206ENST00000554035 XPCQ01831 940 aaPredicted RBP11.78□□□□□ -0.52
RDH11-206ENST00000554035 EIF4A2Q14240 407 aaKnown RBP11.78□□□□□ -0.52
RDH11-206ENST00000554035 CCDC27Q2M243 656 aa11.78□□□□□ -0.52
RDH11-206ENST00000554035 NUTM2GQ5VZR2 741 aa11.78□□□□□ -0.52
RDH11-206ENST00000554035 RSPH6AQ9H0K4 717 aa11.78□□□□□ -0.52
RDH11-206ENST00000554035 SOS2Q07890 1332 aaPredicted RBP11.78□□□□□ -0.52
RDH11-206ENST00000554035 SPATA31A3Q5VYP0 1347 aa11.78□□□□□ -0.52
RDH11-206ENST00000554035 GCP02774 474 aa11.77□□□□□ -0.53
RDH11-206ENST00000554035 AMPHP49418 695 aa11.77□□□□□ -0.53
RDH11-206ENST00000554035 TCP11L2Q8N4U5 519 aa11.77□□□□□ -0.53
RDH11-206ENST00000554035 NHSL1Q5SYE7 1610 aa11.77□□□□□ -0.53
RDH11-206ENST00000554035 HOXC9P31274 260 aa11.76□□□□□ -0.53
RDH11-206ENST00000554035 HSP90AB2PQ58FF8 381 aa11.76□□□□□ -0.53
RDH11-206ENST00000554035 IP6K1Q92551 441 aa11.76□□□□□ -0.53
RDH11-206ENST00000554035 LTN1O94822 1766 aa11.75□□□□□ -0.53
RDH11-206ENST00000554035 SOX12O15370 315 aa11.75□□□□□ -0.53
RDH11-206ENST00000554035 ARHGEF25Q86VW2 580 aa11.75□□□□□ -0.53
RDH11-206ENST00000554035 TRMT2AQ8IZ69 625 aaKnown RBP11.75□□□□□ -0.53
RDH11-206ENST00000554035 DDX17Q92841 729 aaKnown RBP11.75□□□□□ -0.53
RDH11-206ENST00000554035 PPP4R2Q9NY27 417 aa11.75□□□□□ -0.53
RDH11-206ENST00000554035 SALL2Q9Y467 1007 aaPredicted RBP11.75□□□□□ -0.53
RDH11-206ENST00000554035 MAPK8IP3Q9UPT6 1336 aa11.75□□□□□ -0.53
RDH11-206ENST00000554035 ABCC6O95255 1503 aa11.75□□□□□ -0.53
RDH11-206ENST00000554035 CRYBG1Q9Y4K1 1723 aa11.74□□□□□ -0.53
RDH11-206ENST00000554035 NEFMP07197 916 aa11.74□□□□□ -0.53
RDH11-206ENST00000554035 TMPOP42166 694 aaKnown RBP11.74□□□□□ -0.53
RDH11-206ENST00000554035 GOLGA2Q08379 1002 aa11.74□□□□□ -0.53
RDH11-206ENST00000554035 WDR63Q8IWG1 891 aa11.74□□□□□ -0.53
RDH11-206ENST00000554035 WWC1Q8IX03 1113 aa11.74□□□□□ -0.53
RDH11-206ENST00000554035 IGSF1Q8N6C5 1336 aa11.74□□□□□ -0.53
RDH11-206ENST00000554035 SENP3-EIF4A1A0A087X0R7 540 aa11.73□□□□□ -0.53
RDH11-206ENST00000554035 PRKAR2BP31323 418 aa11.73□□□□□ -0.53
RDH11-206ENST00000554035 KDRP35968 1356 aa11.73□□□□□ -0.53
RDH11-206ENST00000554035 AHDC1Q5TGY3 1603 aaPredicted RBP11.73□□□□□ -0.53
RDH11-206ENST00000554035 LMOD2Q6P5Q4 547 aa11.73□□□□□ -0.53
RDH11-206ENST00000554035 RCAN3Q9UKA8 241 aa11.73□□□□□ -0.53
RDH11-206ENST00000554035 CPDO75976 1380 aa11.72□□□□□ -0.53
RDH11-206ENST00000554035 E9PSI1 815 aa11.72□□□□□ -0.53
RDH11-206ENST00000554035 SLFN5Q08AF3 891 aa11.72□□□□□ -0.53
RDH11-206ENST00000554035 DUSP27Q5VZP5 1158 aa11.72□□□□□ -0.53
RDH11-206ENST00000554035 CDCA7LQ96GN5 454 aa11.72□□□□□ -0.53
RDH11-206ENST00000554035 HMOX1P09601 288 aa11.71□□□□□ -0.53
RDH11-206ENST00000554035 POLA2Q14181 598 aa11.71□□□□□ -0.53
RDH11-206ENST00000554035 NFE2L2Q16236 605 aa11.71□□□□□ -0.53
RDH11-206ENST00000554035 RBM42Q9BTD8 480 aaKnown RBP11.71□□□□□ -0.53
RDH11-206ENST00000554035 NCAPD2Q15021 1401 aa11.7□□□□□ -0.54
RDH11-206ENST00000554035 IL16Q14005 1332 aa11.7□□□□□ -0.54
RDH11-206ENST00000554035 RRP1P56182 461 aaKnown RBP11.7□□□□□ -0.54
RDH11-206ENST00000554035 SULT6B1Q6IMI4 303 aa11.7□□□□□ -0.54
RDH11-206ENST00000554035 EYA1Q99502 592 aa11.7□□□□□ -0.54
RDH11-206ENST00000554035 ROBO1Q9Y6N7 1651 aa11.7□□□□□ -0.54
RDH11-206ENST00000554035 PHACTR3Q96KR7 559 aa11.69□□□□□ -0.54
RDH11-206ENST00000554035 TRIM35Q9UPQ4 493 aa11.69□□□□□ -0.54
RDH11-206ENST00000554035 RRP7AQ9Y3A4 280 aaKnown RBP11.69□□□□□ -0.54
RDH11-206ENST00000554035 COL18A1P39060 1754 aa11.69□□□□□ -0.54
RDH11-206ENST00000554035 CAMTA1Q9Y6Y1 1673 aa11.68□□□□□ -0.54
RDH11-206ENST00000554035 RIPK4P57078 832 aa11.68□□□□□ -0.54
RDH11-206ENST00000554035 LMOD3Q0VAK6 560 aa11.68□□□□□ -0.54
RDH11-206ENST00000554035 AEBP1Q8IUX7 1158 aa11.68□□□□□ -0.54
RDH11-206ENST00000554035 ABCA3Q99758 1704 aa11.67□□□□□ -0.54
RDH11-206ENST00000554035 TOM1O60784 492 aa11.67□□□□□ -0.54
RDH11-206ENST00000554035 NEUROD2Q15784 382 aa11.67□□□□□ -0.54
RDH11-206ENST00000554035 LMO7Q8WWI1 1683 aa11.66□□□□□ -0.54
RDH11-206ENST00000554035 ZC3H6P61129 1189 aaKnown RBP11.66□□□□□ -0.54
RDH11-206ENST00000554035 IRX6P78412 446 aaPredicted RBP11.66□□□□□ -0.54
RDH11-206ENST00000554035 CALD1Q05682 793 aaKnown RBP11.66□□□□□ -0.54
RDH11-206ENST00000554035 ANKRD24Q8TF21 1146 aa11.66□□□□□ -0.54
RDH11-206ENST00000554035 LRRC59Q96AG4 307 aaKnown RBP11.66□□□□□ -0.54
RDH11-206ENST00000554035 MYH16Q9H6N6 1097 aa11.66□□□□□ -0.54
RDH11-206ENST00000554035 FOXD4L1Q9NU39 408 aa11.66□□□□□ -0.54
RDH11-206ENST00000554035 COL22A1Q8NFW1 1626 aaPredicted RBP11.66□□□□□ -0.54
RDH11-206ENST00000554035 FAM208AQ9UK61 1670 aaKnown RBP11.65□□□□□ -0.54
RDH11-206ENST00000554035 CABLES1Q8TDN4 633 aa11.65□□□□□ -0.54
RDH11-206ENST00000554035 AXIN2Q9Y2T1 843 aa11.65□□□□□ -0.54
RDH11-206ENST00000554035 KIAA0232Q92628 1395 aa11.65□□□□□ -0.55
RDH11-206ENST00000554035 PLEKHG2Q9H7P9 1386 aa11.65□□□□□ -0.55
RDH11-206ENST00000554035 ERBB3P21860 1342 aa11.64□□□□□ -0.55
RDH11-206ENST00000554035 NBPF6Q5VWK0 638 aa11.64□□□□□ -0.55
RDH11-206ENST00000554035 GAS2L2Q8NHY3 880 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms