RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 CAMTA1Q9Y6Y1 1673 aa19.4■□□□□ 0.7
SHMT2-210ENST00000553950 KIAA0232Q92628 1395 aa19.39■□□□□ 0.69
SHMT2-210ENST00000553950 DIAPH1O60610 1272 aaKnown RBP19.38■□□□□ 0.69
SHMT2-210ENST00000553950 HOXC9P31274 260 aa19.38■□□□□ 0.69
SHMT2-210ENST00000553950 IP6K1Q92551 441 aa19.38■□□□□ 0.69
SHMT2-210ENST00000553950 CABLES1Q8TDN4 633 aa19.37■□□□□ 0.69
SHMT2-210ENST00000553950 PRDM11Q9NQV5 511 aa19.37■□□□□ 0.69
SHMT2-210ENST00000553950 PLEKHG5O94827 1062 aa19.35■□□□□ 0.69
SHMT2-210ENST00000553950 HSPA1LP34931 641 aa19.35■□□□□ 0.69
SHMT2-210ENST00000553950 ZC3H6P61129 1189 aaKnown RBP19.35■□□□□ 0.69
SHMT2-210ENST00000553950 FBXO41Q8TF61 875 aa19.35■□□□□ 0.69
SHMT2-210ENST00000553950 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.34■□□□□ 0.69
SHMT2-210ENST00000553950 ZBTB7CA1YPR0 619 aa19.34■□□□□ 0.69
SHMT2-210ENST00000553950 PNISRQ8TF01 805 aaKnown RBP19.34■□□□□ 0.69
SHMT2-210ENST00000553950 NRAPQ86VF7 1730 aa19.34■□□□□ 0.69
SHMT2-210ENST00000553950 FBLN1P23142 703 aa19.33■□□□□ 0.68
SHMT2-210ENST00000553950 CCDC184Q52MB2 194 aa19.33■□□□□ 0.68
SHMT2-210ENST00000553950 PNNQ9H307 717 aaKnown RBP19.33■□□□□ 0.68
SHMT2-210ENST00000553950 COL5A2P05997 1499 aaPredicted RBP19.32■□□□□ 0.68
SHMT2-210ENST00000553950 RGPD2P0DJD1 1756 aa19.32■□□□□ 0.68
SHMT2-210ENST00000553950 ERBB3P21860 1342 aa19.31■□□□□ 0.68
SHMT2-210ENST00000553950 EIF4A2Q14240 407 aaKnown RBP19.31■□□□□ 0.68
SHMT2-210ENST00000553950 HSP90AB2PQ58FF8 381 aa19.31■□□□□ 0.68
SHMT2-210ENST00000553950 IL13P35225 146 aa19.3■□□□□ 0.68
SHMT2-210ENST00000553950 PLEKHG2Q9H7P9 1386 aa19.3■□□□□ 0.68
SHMT2-210ENST00000553950 PARP4Q9UKK3 1724 aaKnown RBP19.29■□□□□ 0.68
SHMT2-210ENST00000553950 NCAPD2Q15021 1401 aa19.29■□□□□ 0.68
SHMT2-210ENST00000553950 U2SURPO15042 1029 aaKnown RBP19.29■□□□□ 0.68
SHMT2-210ENST00000553950 FAM9BQ8IZU0 186 aa19.29■□□□□ 0.68
SHMT2-210ENST00000553950 IGSF1Q8N6C5 1336 aa19.28■□□□□ 0.68
SHMT2-210ENST00000553950 NEFMP07197 916 aa19.28■□□□□ 0.68
SHMT2-210ENST00000553950 U2AF1L5P0DN76 240 aaPredicted RBP19.28■□□□□ 0.68
SHMT2-210ENST00000553950 U2AF1Q01081 240 aaKnown RBP eCLIP19.28■□□□□ 0.68
SHMT2-210ENST00000553950 WNK3Q9BYP7 1800 aa19.28■□□□□ 0.68
SHMT2-210ENST00000553950 LRP6O75581 1613 aa19.27■□□□□ 0.68
SHMT2-210ENST00000553950 ANKRD24Q8TF21 1146 aa19.27■□□□□ 0.68
SHMT2-210ENST00000553950 KDRP35968 1356 aa19.27■□□□□ 0.68
SHMT2-210ENST00000553950 CHRNA2Q15822 529 aa19.26■□□□□ 0.67
SHMT2-210ENST00000553950 WDR17Q8IZU2 1322 aa19.25■□□□□ 0.67
SHMT2-210ENST00000553950 SLIT2O94813 1529 aa19.25■□□□□ 0.67
SHMT2-210ENST00000553950 NUTM2BA6NNL0 878 aaPredicted RBP19.25■□□□□ 0.67
SHMT2-210ENST00000553950 NUTM2EB1AL46 878 aaPredicted RBP19.25■□□□□ 0.67
SHMT2-210ENST00000553950 NUTM2AQ8IVF1 878 aaPredicted RBP19.25■□□□□ 0.67
SHMT2-210ENST00000553950 FCHSD2O94868 740 aa19.24■□□□□ 0.67
SHMT2-210ENST00000553950 CSB-PGBD3P0DP91 1061 aa19.24■□□□□ 0.67
SHMT2-210ENST00000553950 MAPK8IP3Q9UPT6 1336 aa19.24■□□□□ 0.67
SHMT2-210ENST00000553950 ADAMTS2O95450 1211 aa19.23■□□□□ 0.67
SHMT2-210ENST00000553950 LTV1Q96GA3 475 aaPredicted RBP19.23■□□□□ 0.67
SHMT2-210ENST00000553950 ADAMTS8Q9UP79 889 aa19.23■□□□□ 0.67
SHMT2-210ENST00000553950 CRB1P82279 1406 aa19.23■□□□□ 0.67
SHMT2-210ENST00000553950 FAM83GA6ND36 823 aa19.22■□□□□ 0.67
SHMT2-210ENST00000553950 MEX3CQ5U5Q3 659 aaKnown RBP19.22■□□□□ 0.67
SHMT2-210ENST00000553950 NGEFQ8N5V2 710 aa19.22■□□□□ 0.67
SHMT2-210ENST00000553950 AXIN2Q9Y2T1 843 aa19.22■□□□□ 0.67
SHMT2-210ENST00000553950 PKD1L3Q7Z443 1732 aa19.2■□□□□ 0.66
SHMT2-210ENST00000553950 EVA1CP58658 441 aa19.2■□□□□ 0.66
SHMT2-210ENST00000553950 RUNDC1Q96C34 613 aa19.2■□□□□ 0.66
SHMT2-210ENST00000553950 EYA1Q99502 592 aa19.2■□□□□ 0.66
SHMT2-210ENST00000553950 RSPH6AQ9H0K4 717 aa19.2■□□□□ 0.66
SHMT2-210ENST00000553950 BTG4Q9NY30 223 aa19.2■□□□□ 0.66
SHMT2-210ENST00000553950 SULT6B1Q6IMI4 303 aa19.19■□□□□ 0.66
SHMT2-210ENST00000553950 DLG5Q8TDM6 1919 aa19.18■□□□□ 0.66
SHMT2-210ENST00000553950 NLRP2Q9NX02 1062 aa19.18■□□□□ 0.66
SHMT2-210ENST00000553950 PRKAR2BP31323 418 aa19.17■□□□□ 0.66
SHMT2-210ENST00000553950 TOM1L2Q6ZVM7 507 aa19.17■□□□□ 0.66
SHMT2-210ENST00000553950 C8orf37Q96NL8 207 aa19.17■□□□□ 0.66
SHMT2-210ENST00000553950 CARD10Q9BWT7 1032 aa19.17■□□□□ 0.66
SHMT2-210ENST00000553950 HMOX1P09601 288 aa19.16■□□□□ 0.66
SHMT2-210ENST00000553950 NCBP3Q53F19 620 aaKnown RBP19.16■□□□□ 0.66
SHMT2-210ENST00000553950 NGLY1Q96IV0 654 aa19.16■□□□□ 0.66
SHMT2-210ENST00000553950 STRN4Q9NRL3 753 aa19.16■□□□□ 0.66
SHMT2-210ENST00000553950 NBPF6Q5VWK0 638 aa19.15■□□□□ 0.66
SHMT2-210ENST00000553950 FNBP4Q8N3X1 1017 aaPredicted RBP19.15■□□□□ 0.66
SHMT2-210ENST00000553950 NBPF4Q96M43 638 aa19.15■□□□□ 0.66
SHMT2-210ENST00000553950 HNRNPUQ00839 825 aaKnown RBP eCLIP19.14■□□□□ 0.65
SHMT2-210ENST00000553950 RAPGEF4Q8WZA2 1011 aa19.14■□□□□ 0.65
SHMT2-210ENST00000553950 PLEKHF1Q96S99 279 aa19.14■□□□□ 0.65
SHMT2-210ENST00000553950 ILDR1Q86SU0 546 aaPredicted RBP19.13■□□□□ 0.65
SHMT2-210ENST00000553950 UNC5CLQ8IV45 518 aa19.13■□□□□ 0.65
SHMT2-210ENST00000553950 THRAP3Q9Y2W1 955 aaKnown RBP19.13■□□□□ 0.65
SHMT2-210ENST00000553950 VIRMAQ69YN4 1812 aaKnown RBP19.13■□□□□ 0.65
SHMT2-210ENST00000553950 BCL9LQ86UU0 1499 aa19.12■□□□□ 0.65
SHMT2-210ENST00000553950 OVOS2A0A0G2JMS6 1433 aa19.12■□□□□ 0.65
SHMT2-210ENST00000553950 ZBED9Q6R2W3 1325 aa19.12■□□□□ 0.65
SHMT2-210ENST00000553950 LMOD3Q0VAK6 560 aa19.12■□□□□ 0.65
SHMT2-210ENST00000553950 AEBP1Q8IUX7 1158 aa19.12■□□□□ 0.65
SHMT2-210ENST00000553950 CCDC146Q8IYE0 955 aa19.12■□□□□ 0.65
SHMT2-210ENST00000553950 GAS2L2Q8NHY3 880 aa19.12■□□□□ 0.65
SHMT2-210ENST00000553950 MEGF6O75095 1541 aa19.11■□□□□ 0.65
SHMT2-210ENST00000553950 TATP17735 454 aaPredicted RBP19.11■□□□□ 0.65
SHMT2-210ENST00000553950 AMOTQ4VCS5 1084 aa19.11■□□□□ 0.65
SHMT2-210ENST00000553950 LARP1Q6PKG0 1096 aaKnown RBP19.11■□□□□ 0.65
SHMT2-210ENST00000553950 CDCA7Q9BWT1 371 aaPredicted RBP19.11■□□□□ 0.65
SHMT2-210ENST00000553950 USHBP1Q8N6Y0 703 aa19.1■□□□□ 0.65
SHMT2-210ENST00000553950 USP21Q9UK80 565 aa19.1■□□□□ 0.65
SHMT2-210ENST00000553950 SHANK3Q9BYB0 1731 aa19.1■□□□□ 0.65
SHMT2-210ENST00000553950 AFF2P51816 1311 aa19.09■□□□□ 0.65
SHMT2-210ENST00000553950 VPS72Q15906 364 aa19.09■□□□□ 0.65
SHMT2-210ENST00000553950 TCP11L2Q8N4U5 519 aa19.09■□□□□ 0.65
SHMT2-210ENST00000553950 YTHDC1Q96MU7 727 aaKnown RBP19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms