RNA–Protein interactions for RNA: ENST00000553816.5

RDH11-205, Transcript of retinol dehydrogenase 11, humanhuman

TSL 2

Gene RDH11, Length 1,163 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-205ENST00000553816 EVC2Q86UK5 1308 aa11.62□□□□□ -0.55
RDH11-205ENST00000553816 ST20-MTHFSA0A0A6YYL1 179 aa11.62□□□□□ -0.55
RDH11-205ENST00000553816 PLEKHG3A1L390 1219 aa11.62□□□□□ -0.55
RDH11-205ENST00000553816 MEX3CQ5U5Q3 659 aaKnown RBP11.62□□□□□ -0.55
RDH11-205ENST00000553816 CABLES1Q8TDN4 633 aa11.62□□□□□ -0.55
RDH11-205ENST00000553816 PHRF1Q9P1Y6 1649 aaKnown RBP11.61□□□□□ -0.55
RDH11-205ENST00000553816 LMOD2Q6P5Q4 547 aa11.61□□□□□ -0.55
RDH11-205ENST00000553816 TESK2Q96S53 571 aa11.61□□□□□ -0.55
RDH11-205ENST00000553816 CABP1Q9NZU7 370 aa11.61□□□□□ -0.55
RDH11-205ENST00000553816 USP47Q96K76 1375 aa11.61□□□□□ -0.55
RDH11-205ENST00000553816 MON2Q7Z3U7 1717 aa11.6□□□□□ -0.55
RDH11-205ENST00000553816 NRKQ7Z2Y5 1582 aa11.6□□□□□ -0.55
RDH11-205ENST00000553816 PLCG2P16885 1265 aa11.6□□□□□ -0.55
RDH11-205ENST00000553816 FKBP8Q14318 412 aa11.6□□□□□ -0.55
RDH11-205ENST00000553816 C8orf37Q96NL8 207 aa11.6□□□□□ -0.55
RDH11-205ENST00000553816 AFF2P51816 1311 aa11.6□□□□□ -0.55
RDH11-205ENST00000553816 PLCH1Q4KWH8 1693 aa11.59□□□□□ -0.55
RDH11-205ENST00000553816 IRX5P78411 483 aaPredicted RBP11.59□□□□□ -0.55
RDH11-205ENST00000553816 PIK3C2AO00443 1686 aa11.59□□□□□ -0.55
RDH11-205ENST00000553816 CD163L1Q9NR16 1453 aa11.57□□□□□ -0.56
RDH11-205ENST00000553816 ARHGEF10O15013 1369 aa11.57□□□□□ -0.56
RDH11-205ENST00000553816 NUTM2GQ5VZR2 741 aa11.57□□□□□ -0.56
RDH11-205ENST00000553816 USP6P35125 1406 aa11.57□□□□□ -0.56
RDH11-205ENST00000553816 SSH2Q76I76 1423 aa11.57□□□□□ -0.56
RDH11-205ENST00000553816 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.57□□□□□ -0.56
RDH11-205ENST00000553816 ATAD2Q6PL18 1390 aa11.56□□□□□ -0.56
RDH11-205ENST00000553816 MYOM1P52179 1685 aa11.56□□□□□ -0.56
RDH11-205ENST00000553816 CPSF1Q10570 1443 aaKnown RBP11.56□□□□□ -0.56
RDH11-205ENST00000553816 NRAPQ86VF7 1730 aa11.56□□□□□ -0.56
RDH11-205ENST00000553816 NGLY1Q96IV0 654 aa11.56□□□□□ -0.56
RDH11-205ENST00000553816 NWD2Q9ULI1 1742 aa11.55□□□□□ -0.56
RDH11-205ENST00000553816 FNBP4Q8N3X1 1017 aaPredicted RBP11.55□□□□□ -0.56
RDH11-205ENST00000553816 SLC12A5Q9H2X9 1139 aa11.55□□□□□ -0.56
RDH11-205ENST00000553816 BCL9LQ86UU0 1499 aa11.55□□□□□ -0.56
RDH11-205ENST00000553816 SLIT2O94813 1529 aa11.55□□□□□ -0.56
RDH11-205ENST00000553816 ZNF772Q68DY9 489 aaPredicted RBP11.54□□□□□ -0.56
RDH11-205ENST00000553816 FAM212AQ96EL1 285 aa11.54□□□□□ -0.56
RDH11-205ENST00000553816 COL14A1Q05707 1796 aaKnown RBP11.54□□□□□ -0.56
RDH11-205ENST00000553816 HAP1P54257 671 aaPredicted RBP11.53□□□□□ -0.56
RDH11-205ENST00000553816 ABTB2Q8N961 1025 aa11.53□□□□□ -0.56
RDH11-205ENST00000553816 TMC1Q8TDI8 760 aa11.53□□□□□ -0.56
RDH11-205ENST00000553816 QTRT2Q9H974 415 aaKnown RBP11.53□□□□□ -0.56
RDH11-205ENST00000553816 USP21Q9UK80 565 aa11.53□□□□□ -0.56
RDH11-205ENST00000553816 RGPD5Q99666 1765 aa11.52□□□□□ -0.57
RDH11-205ENST00000553816 FAM83GA6ND36 823 aa11.52□□□□□ -0.57
RDH11-205ENST00000553816 ZBTB47Q9UFB7 747 aaPredicted RBP11.52□□□□□ -0.57
RDH11-205ENST00000553816 TTC21BQ7Z4L5 1316 aa11.52□□□□□ -0.57
RDH11-205ENST00000553816 USP54Q70EL1 1684 aa11.52□□□□□ -0.57
RDH11-205ENST00000553816 A0A1W2PP64 1363 aa11.52□□□□□ -0.57
RDH11-205ENST00000553816 KTN1Q86UP2 1357 aaKnown RBP11.52□□□□□ -0.57
RDH11-205ENST00000553816 ATRNO75882 1429 aa11.52□□□□□ -0.57
RDH11-205ENST00000553816 GLI3P10071 1580 aa11.51□□□□□ -0.57
RDH11-205ENST00000553816 HSPA5P11021 654 aaKnown RBP11.51□□□□□ -0.57
RDH11-205ENST00000553816 TMF1P82094 1093 aa11.51□□□□□ -0.57
RDH11-205ENST00000553816 MMRN1Q13201 1228 aa11.51□□□□□ -0.57
RDH11-205ENST00000553816 PUS7Q96PZ0 661 aaKnown RBP11.51□□□□□ -0.57
RDH11-205ENST00000553816 USP19O94966 1318 aa11.51□□□□□ -0.57
RDH11-205ENST00000553816 BRD4O60885 1362 aaPredicted RBP11.51□□□□□ -0.57
RDH11-205ENST00000553816 SLIT3O75094 1523 aa11.5□□□□□ -0.57
RDH11-205ENST00000553816 LMO7Q8WWI1 1683 aa11.5□□□□□ -0.57
RDH11-205ENST00000553816 COL18A1P39060 1754 aa11.5□□□□□ -0.57
RDH11-205ENST00000553816 SPNS2Q8IVW8 549 aa11.5□□□□□ -0.57
RDH11-205ENST00000553816 MARVELD3Q96A59 401 aa11.5□□□□□ -0.57
RDH11-205ENST00000553816 BRWD3Q6RI45 1802 aa11.49□□□□□ -0.57
RDH11-205ENST00000553816 SOCS7O14512 581 aa11.49□□□□□ -0.57
RDH11-205ENST00000553816 RXRBP28702 533 aa11.49□□□□□ -0.57
RDH11-205ENST00000553816 NLRP6P59044 892 aa11.49□□□□□ -0.57
RDH11-205ENST00000553816 ZC3H6P61129 1189 aaKnown RBP11.49□□□□□ -0.57
RDH11-205ENST00000553816 EIF4G2P78344 907 aaKnown RBP eCLIP11.49□□□□□ -0.57
RDH11-205ENST00000553816 CHRNA2Q15822 529 aa11.49□□□□□ -0.57
RDH11-205ENST00000553816 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.49□□□□□ -0.57
RDH11-205ENST00000553816 OCEL1Q9H607 264 aa11.49□□□□□ -0.57
RDH11-205ENST00000553816 KIAA0232Q92628 1395 aa11.49□□□□□ -0.57
RDH11-205ENST00000553816 LTN1O94822 1766 aa11.49□□□□□ -0.57
RDH11-205ENST00000553816 PYGBP11216 843 aa11.48□□□□□ -0.57
RDH11-205ENST00000553816 NLRP13Q86W25 1043 aa11.48□□□□□ -0.57
RDH11-205ENST00000553816 UNC5CLQ8IV45 518 aa11.48□□□□□ -0.57
RDH11-205ENST00000553816 RGS12O14924 1447 aa11.48□□□□□ -0.57
RDH11-205ENST00000553816 KIF20BQ96Q89 1820 aa11.48□□□□□ -0.57
RDH11-205ENST00000553816 CAMTA1Q9Y6Y1 1673 aa11.47□□□□□ -0.57
RDH11-205ENST00000553816 TTC21AQ8NDW8 1320 aa11.47□□□□□ -0.57
RDH11-205ENST00000553816 C11orf95C9JLR9 678 aaPredicted RBP11.47□□□□□ -0.57
RDH11-205ENST00000553816 GCP02774 474 aa11.47□□□□□ -0.57
RDH11-205ENST00000553816 RBM6P78332 1123 aaKnown RBP11.47□□□□□ -0.57
RDH11-205ENST00000553816 NME9Q86XW9 330 aa11.47□□□□□ -0.57
RDH11-205ENST00000553816 BTG4Q9NY30 223 aa11.47□□□□□ -0.57
RDH11-205ENST00000553816 TRPC5Q9UL62 973 aaPredicted RBP11.47□□□□□ -0.57
RDH11-205ENST00000553816 NFAT5O94916 1531 aa11.46□□□□□ -0.57
RDH11-205ENST00000553816 CDK12Q9NYV4 1490 aaPredicted RBP11.46□□□□□ -0.57
RDH11-205ENST00000553816 EDC4Q6P2E9 1401 aaKnown RBP11.46□□□□□ -0.57
RDH11-205ENST00000553816 SLC24A1O60721 1099 aa11.46□□□□□ -0.57
RDH11-205ENST00000553816 HDGFL2Q7Z4V5 671 aaPredicted RBP11.46□□□□□ -0.57
RDH11-205ENST00000553816 PRDM11Q9NQV5 511 aa11.46□□□□□ -0.57
RDH11-205ENST00000553816 TERF2IPQ9NYB0 399 aa11.46□□□□□ -0.57
RDH11-205ENST00000553816 PCDHB8Q9UN66 801 aa11.46□□□□□ -0.57
RDH11-205ENST00000553816 ANKRD36BQ8N2N9 1353 aa11.45□□□□□ -0.58
RDH11-205ENST00000553816 NINLQ9Y2I6 1382 aa11.45□□□□□ -0.58
RDH11-205ENST00000553816 GJD4Q96KN9 370 aaPredicted RBP11.45□□□□□ -0.58
RDH11-205ENST00000553816 TMEM121BQ9BXQ6 578 aaPredicted RBP11.45□□□□□ -0.58
RDH11-205ENST00000553816 CPDO75976 1380 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms