RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 ROBO2Q9HCK4 1378 aa11.2□□□□□ -0.62
ATXN3-219ENST00000553488 SOS2Q07890 1332 aaPredicted RBP11.2□□□□□ -0.62
ATXN3-219ENST00000553488 HS3ST6Q96QI5 342 aa11.2□□□□□ -0.62
ATXN3-219ENST00000553488 ATAD2Q6PL18 1390 aa11.19□□□□□ -0.62
ATXN3-219ENST00000553488 FAM205CA6NFA0 338 aa11.19□□□□□ -0.62
ATXN3-219ENST00000553488 CAMK2BQ13554 666 aa11.19□□□□□ -0.62
ATXN3-219ENST00000553488 PXDNQ92626 1479 aa11.19□□□□□ -0.62
ATXN3-219ENST00000553488 CDAN1Q8IWY9 1227 aa11.18□□□□□ -0.62
ATXN3-219ENST00000553488 ADAMTS2O95450 1211 aa11.17□□□□□ -0.62
ATXN3-219ENST00000553488 NUDT7P0C024 238 aa11.17□□□□□ -0.62
ATXN3-219ENST00000553488 ZNF326Q5BKZ1 582 aaKnown RBP11.17□□□□□ -0.62
ATXN3-219ENST00000553488 BRWD3Q6RI45 1802 aa11.16□□□□□ -0.62
ATXN3-219ENST00000553488 KNDC1Q76NI1 1749 aa11.16□□□□□ -0.62
ATXN3-219ENST00000553488 IFT172Q9UG01 1749 aa11.16□□□□□ -0.62
ATXN3-219ENST00000553488 FNBP4Q8N3X1 1017 aaPredicted RBP11.16□□□□□ -0.62
ATXN3-219ENST00000553488 NGLY1Q96IV0 654 aa11.16□□□□□ -0.62
ATXN3-219ENST00000553488 ORAI2Q96SN7 254 aa11.16□□□□□ -0.62
ATXN3-219ENST00000553488 EMILIN3Q9NT22 766 aa11.16□□□□□ -0.62
ATXN3-219ENST00000553488 BCL9LQ86UU0 1499 aa11.16□□□□□ -0.62
ATXN3-219ENST00000553488 HFM1A2PYH4 1435 aa11.16□□□□□ -0.62
ATXN3-219ENST00000553488 GLI3P10071 1580 aa11.16□□□□□ -0.62
ATXN3-219ENST00000553488 ZNF316A6NFI3 1004 aaPredicted RBP11.15□□□□□ -0.62
ATXN3-219ENST00000553488 PLCB2Q00722 1185 aa11.15□□□□□ -0.62
ATXN3-219ENST00000553488 TSHZ2Q9NRE2 1034 aa11.15□□□□□ -0.62
ATXN3-219ENST00000553488 USP21Q9UK80 565 aa11.15□□□□□ -0.62
ATXN3-219ENST00000553488 TRPC5Q9UL62 973 aaPredicted RBP11.15□□□□□ -0.62
ATXN3-219ENST00000553488 ERBB3P21860 1342 aa11.14□□□□□ -0.63
ATXN3-219ENST00000553488 FMN2Q9NZ56 1722 aa11.14□□□□□ -0.63
ATXN3-219ENST00000553488 ABCA3Q99758 1704 aa11.13□□□□□ -0.63
ATXN3-219ENST00000553488 NAIPQ13075 1403 aa11.13□□□□□ -0.63
ATXN3-219ENST00000553488 USP32Q8NFA0 1604 aa11.13□□□□□ -0.63
ATXN3-219ENST00000553488 TECPR2O15040 1411 aa11.12□□□□□ -0.63
ATXN3-219ENST00000553488 KIF1AQ12756 1690 aa11.12□□□□□ -0.63
ATXN3-219ENST00000553488 TBC1D12O60347 775 aa11.12□□□□□ -0.63
ATXN3-219ENST00000553488 ITGAEP38570 1179 aa11.12□□□□□ -0.63
ATXN3-219ENST00000553488 VARS2Q5ST30 1063 aaKnown RBP11.12□□□□□ -0.63
ATXN3-219ENST00000553488 LHX6Q9UPM6 363 aa11.12□□□□□ -0.63
ATXN3-219ENST00000553488 PLCH1Q4KWH8 1693 aa11.11□□□□□ -0.63
ATXN3-219ENST00000553488 SLIT2O94813 1529 aa11.11□□□□□ -0.63
ATXN3-219ENST00000553488 LRP5O75197 1615 aa11.11□□□□□ -0.63
ATXN3-219ENST00000553488 KRTAP3-3Q9BYR6 98 aa11.11□□□□□ -0.63
ATXN3-219ENST00000553488 KRTAP3-2Q9BYR7 98 aa11.11□□□□□ -0.63
ATXN3-219ENST00000553488 RGPD8O14715 1765 aaPredicted RBP11.11□□□□□ -0.63
ATXN3-219ENST00000553488 RRBP1Q9P2E9 1410 aaKnown RBP11.1□□□□□ -0.63
ATXN3-219ENST00000553488 NWD2Q9ULI1 1742 aa11.1□□□□□ -0.63
ATXN3-219ENST00000553488 ANO8Q9HCE9 1232 aaPredicted RBP11.1□□□□□ -0.63
ATXN3-219ENST00000553488 RALGAPBQ86X10 1494 aa11.1□□□□□ -0.63
ATXN3-219ENST00000553488 NPHP3Q7Z494 1330 aa11.09□□□□□ -0.63
ATXN3-219ENST00000553488 ZNF687Q8N1G0 1237 aa11.09□□□□□ -0.63
ATXN3-219ENST00000553488 RPGRIP1LQ68CZ1 1315 aa11.09□□□□□ -0.63
ATXN3-219ENST00000553488 GJD4Q96KN9 370 aaPredicted RBP11.07□□□□□ -0.64
ATXN3-219ENST00000553488 BLMP54132 1417 aaPredicted RBP11.07□□□□□ -0.64
ATXN3-219ENST00000553488 NRAPQ86VF7 1730 aa11.06□□□□□ -0.64
ATXN3-219ENST00000553488 CCDC125Q86Z20 511 aa11.06□□□□□ -0.64
ATXN3-219ENST00000553488 SPATA31E1Q6ZUB1 1445 aa11.06□□□□□ -0.64
ATXN3-219ENST00000553488 CCDC144AA2RUR9 1427 aa11.05□□□□□ -0.64
ATXN3-219ENST00000553488 XPCQ01831 940 aaPredicted RBP11.05□□□□□ -0.64
ATXN3-219ENST00000553488 ESCO1Q5FWF5 840 aa11.05□□□□□ -0.64
ATXN3-219ENST00000553488 ARIH1Q9Y4X5 557 aaPredicted RBP11.05□□□□□ -0.64
ATXN3-219ENST00000553488 LRPPRCP42704 1394 aaKnown RBP11.04□□□□□ -0.64
ATXN3-219ENST00000553488 PLEKHH1Q9ULM0 1364 aa11.04□□□□□ -0.64
ATXN3-219ENST00000553488 PIK3C2GO75747 1445 aa11.04□□□□□ -0.64
ATXN3-219ENST00000553488 FOXO3O43524 673 aa11.04□□□□□ -0.64
ATXN3-219ENST00000553488 SPATA31A3Q5VYP0 1347 aa11.04□□□□□ -0.64
ATXN3-219ENST00000553488 ADGRF5Q8IZF2 1346 aa11.04□□□□□ -0.64
ATXN3-219ENST00000553488 TNS3Q68CZ2 1445 aa11.03□□□□□ -0.64
ATXN3-219ENST00000553488 PSDA5PKW4 1024 aaPredicted RBP11.03□□□□□ -0.64
ATXN3-219ENST00000553488 EVI5O60447 810 aa11.03□□□□□ -0.64
ATXN3-219ENST00000553488 POTEEQ6S8J3 1075 aa11.03□□□□□ -0.64
ATXN3-219ENST00000553488 UNC5CLQ8IV45 518 aa11.03□□□□□ -0.64
ATXN3-219ENST00000553488 TRPM3Q9HCF6 1732 aaPredicted RBP11.03□□□□□ -0.64
ATXN3-219ENST00000553488 CRYBG1Q9Y4K1 1723 aa11.03□□□□□ -0.64
ATXN3-219ENST00000553488 ABCC11Q96J66 1382 aa11.03□□□□□ -0.64
ATXN3-219ENST00000553488 MAP3K9P80192 1104 aa11.02□□□□□ -0.65
ATXN3-219ENST00000553488 E2F4Q16254 413 aa11.02□□□□□ -0.65
ATXN3-219ENST00000553488 PPARGC1BQ86YN6 1023 aaKnown RBP11.02□□□□□ -0.65
ATXN3-219ENST00000553488 NRXN1Q9ULB1 1477 aa11.01□□□□□ -0.65
ATXN3-219ENST00000553488 WAPLQ7Z5K2 1190 aa11.01□□□□□ -0.65
ATXN3-219ENST00000553488 ALS2Q96Q42 1657 aa11.01□□□□□ -0.65
ATXN3-219ENST00000553488 RGPD1P0DJD0 1748 aa11.01□□□□□ -0.65
ATXN3-219ENST00000553488 TNS1Q9HBL0 1735 aaKnown RBP11.01□□□□□ -0.65
ATXN3-219ENST00000553488 YTHDC2Q9H6S0 1430 aaKnown RBP11.01□□□□□ -0.65
ATXN3-219ENST00000553488 ADGRB2O60241 1585 aa11□□□□□ -0.65
ATXN3-219ENST00000553488 NUTM2FA1L443 756 aa11□□□□□ -0.65
ATXN3-219ENST00000553488 DEFB132Q7Z7B7 95 aa11□□□□□ -0.65
ATXN3-219ENST00000553488 ANKRD30BQ9BXX2 1392 aa11□□□□□ -0.65
ATXN3-219ENST00000553488 DPYSL4O14531 572 aa10.99□□□□□ -0.65
ATXN3-219ENST00000553488 WDR70Q9NW82 654 aa10.99□□□□□ -0.65
ATXN3-219ENST00000553488 THSD7AQ9UPZ6 1657 aa10.98□□□□□ -0.65
ATXN3-219ENST00000553488 FOSBP53539 338 aa10.98□□□□□ -0.65
ATXN3-219ENST00000553488 VPS72Q15906 364 aa10.98□□□□□ -0.65
ATXN3-219ENST00000553488 STK26Q9P289 416 aa10.98□□□□□ -0.65
ATXN3-219ENST00000553488 SBNO1A3KN83 1393 aa10.98□□□□□ -0.65
ATXN3-219ENST00000553488 COL14A1Q05707 1796 aaKnown RBP10.98□□□□□ -0.65
ATXN3-219ENST00000553488 ONECUT3O60422 494 aaPredicted RBP10.97□□□□□ -0.65
ATXN3-219ENST00000553488 SEPT12Q8IYM1 358 aa10.97□□□□□ -0.65
ATXN3-219ENST00000553488 DLC1Q96QB1 1528 aa10.97□□□□□ -0.65
ATXN3-219ENST00000553488 TMEM132EQ6IEE7 984 aa10.96□□□□□ -0.65
ATXN3-219ENST00000553488 KRT28Q7Z3Y7 464 aa10.96□□□□□ -0.65
ATXN3-219ENST00000553488 ARHGEF10O15013 1369 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms