RNA–Protein interactions for RNA: ENST00000553096.5

BEST3-212, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-212ENST00000553096 TXNDC2Q86VQ3 553 aa9.32□□□□□ -0.92
BEST3-212ENST00000553096 PLEKHF1Q96S99 279 aa9.32□□□□□ -0.92
BEST3-212ENST00000553096 TERF2IPQ9NYB0 399 aa9.32□□□□□ -0.92
BEST3-212ENST00000553096 SETD1BQ9UPS6 1966 aaKnown RBP9.31□□□□□ -0.92
BEST3-212ENST00000553096 ARHGAP23Q9P227 1491 aa9.31□□□□□ -0.92
BEST3-212ENST00000553096 USP19O94966 1318 aa9.31□□□□□ -0.92
BEST3-212ENST00000553096 XRN1Q8IZH2 1706 aaKnown RBP9.31□□□□□ -0.92
BEST3-212ENST00000553096 FBLN1P23142 703 aa9.31□□□□□ -0.92
BEST3-212ENST00000553096 CANXP27824 592 aaKnown RBP9.31□□□□□ -0.92
BEST3-212ENST00000553096 LTKP29376 864 aa9.31□□□□□ -0.92
BEST3-212ENST00000553096 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.31□□□□□ -0.92
BEST3-212ENST00000553096 PLEKHG1Q9ULL1 1385 aa9.3□□□□□ -0.92
BEST3-212ENST00000553096 WASLO00401 505 aaPredicted RBP9.3□□□□□ -0.92
BEST3-212ENST00000553096 NEUROD2Q15784 382 aa9.3□□□□□ -0.92
BEST3-212ENST00000553096 PEAK1Q9H792 1746 aa9.3□□□□□ -0.92
BEST3-212ENST00000553096 FMN2Q9NZ56 1722 aa9.3□□□□□ -0.92
BEST3-212ENST00000553096 MARF1Q9Y4F3 1742 aaKnown RBP9.3□□□□□ -0.92
BEST3-212ENST00000553096 PRR36Q9H6K5 1346 aa9.3□□□□□ -0.92
BEST3-212ENST00000553096 EDC4Q6P2E9 1401 aaKnown RBP9.3□□□□□ -0.92
BEST3-212ENST00000553096 CFAP53Q96M91 514 aa9.3□□□□□ -0.92
BEST3-212ENST00000553096 IGHDP01880 384 aa9.29□□□□□ -0.92
BEST3-212ENST00000553096 HSP90B1P14625 803 aaKnown RBP9.29□□□□□ -0.92
BEST3-212ENST00000553096 HDGFL2Q7Z4V5 671 aaPredicted RBP9.29□□□□□ -0.92
BEST3-212ENST00000553096 U2AF1L5P0DN76 240 aaPredicted RBP9.29□□□□□ -0.92
BEST3-212ENST00000553096 U2AF1Q01081 240 aaKnown RBP eCLIP9.29□□□□□ -0.92
BEST3-212ENST00000553096 CCDC27Q2M243 656 aa9.29□□□□□ -0.92
BEST3-212ENST00000553096 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.29□□□□□ -0.92
BEST3-212ENST00000553096 ZRANB1Q9UGI0 708 aa9.29□□□□□ -0.92
BEST3-212ENST00000553096 RGPD1P0DJD0 1748 aa9.28□□□□□ -0.92
BEST3-212ENST00000553096 DIP2AQ14689 1571 aa9.27□□□□□ -0.92
BEST3-212ENST00000553096 CEP170BQ9Y4F5 1589 aaPredicted RBP9.27□□□□□ -0.92
BEST3-212ENST00000553096 NME9Q86XW9 330 aa9.27□□□□□ -0.93
BEST3-212ENST00000553096 SIRT1Q96EB6 747 aa9.27□□□□□ -0.93
BEST3-212ENST00000553096 TBC1D32Q96NH3 1257 aa9.27□□□□□ -0.93
BEST3-212ENST00000553096 ZNF142P52746 1687 aaPredicted RBP9.27□□□□□ -0.93
BEST3-212ENST00000553096 CDK12Q9NYV4 1490 aaPredicted RBP9.27□□□□□ -0.93
BEST3-212ENST00000553096 WDR63Q8IWG1 891 aa9.27□□□□□ -0.93
BEST3-212ENST00000553096 NUDT16Q96DE0 195 aaKnown RBP9.27□□□□□ -0.93
BEST3-212ENST00000553096 ANTXR1Q9H6X2 564 aa9.27□□□□□ -0.93
BEST3-212ENST00000553096 POLKQ9UBT6 870 aa9.27□□□□□ -0.93
BEST3-212ENST00000553096 TRIM35Q9UPQ4 493 aa9.27□□□□□ -0.93
BEST3-212ENST00000553096 RWDD1Q9H446 243 aaPredicted RBP9.26□□□□□ -0.93
BEST3-212ENST00000553096 PRDM4Q9UKN5 801 aa9.26□□□□□ -0.93
BEST3-212ENST00000553096 U2SURPO15042 1029 aaKnown RBP9.26□□□□□ -0.93
BEST3-212ENST00000553096 TNNQ9UQP3 1299 aa9.26□□□□□ -0.93
BEST3-212ENST00000553096 PIK3C2AO00443 1686 aa9.26□□□□□ -0.93
BEST3-212ENST00000553096 TEX2Q8IWB9 1127 aa9.25□□□□□ -0.93
BEST3-212ENST00000553096 CNPY4Q8N129 248 aa9.25□□□□□ -0.93
BEST3-212ENST00000553096 COG6Q9Y2V7 657 aa9.25□□□□□ -0.93
BEST3-212ENST00000553096 CHD2O14647 1828 aaKnown RBP9.25□□□□□ -0.93
BEST3-212ENST00000553096 GOLGA6L3A6NEY3 463 aa9.25□□□□□ -0.93
BEST3-212ENST00000553096 IGSF3O75054 1194 aa9.25□□□□□ -0.93
BEST3-212ENST00000553096 CHRM1P11229 460 aaPredicted RBP9.25□□□□□ -0.93
BEST3-212ENST00000553096 TMPOP42166 694 aaKnown RBP9.25□□□□□ -0.93
BEST3-212ENST00000553096 RARSP54136 660 aaKnown RBP9.25□□□□□ -0.93
BEST3-212ENST00000553096 THEMISQ8N1K5 641 aaPredicted RBP9.25□□□□□ -0.93
BEST3-212ENST00000553096 SLKQ9H2G2 1235 aaPredicted RBP9.25□□□□□ -0.93
BEST3-212ENST00000553096 ISY1Q9ULR0 285 aaKnown RBP9.25□□□□□ -0.93
BEST3-212ENST00000553096 STRCQ7RTU9 1775 aa9.25□□□□□ -0.93
BEST3-212ENST00000553096 HSP90AA2PQ14568 343 aaPredicted RBP9.25□□□□□ -0.93
BEST3-212ENST00000553096 CFAP44Q96MT7 982 aa9.25□□□□□ -0.93
BEST3-212ENST00000553096 EMILIN1Q9Y6C2 1016 aa9.25□□□□□ -0.93
BEST3-212ENST00000553096 PTCH1Q13635 1447 aa9.24□□□□□ -0.93
BEST3-212ENST00000553096 DIAPH1O60610 1272 aaKnown RBP9.24□□□□□ -0.93
BEST3-212ENST00000553096 SEC24BO95487 1268 aa9.24□□□□□ -0.93
BEST3-212ENST00000553096 PANK1Q8TE04 598 aa9.24□□□□□ -0.93
BEST3-212ENST00000553096 TSR2Q969E8 191 aaKnown RBP9.24□□□□□ -0.93
BEST3-212ENST00000553096 SLC26A8Q96RN1 970 aa9.24□□□□□ -0.93
BEST3-212ENST00000553096 AATKQ6ZMQ8 1374 aa9.24□□□□□ -0.93
BEST3-212ENST00000553096 OVOS2A0A0J9YW53 1432 aa9.24□□□□□ -0.93
BEST3-212ENST00000553096 OVOS2Q6IE36 1432 aa9.24□□□□□ -0.93
BEST3-212ENST00000553096 USP54Q70EL1 1684 aa9.23□□□□□ -0.93
BEST3-212ENST00000553096 FTSJ3Q8IY81 847 aaKnown RBP9.23□□□□□ -0.93
BEST3-212ENST00000553096 TBC1D2Q9BYX2 928 aa9.23□□□□□ -0.93
BEST3-212ENST00000553096 PRDM10Q9NQV6 1147 aa9.23□□□□□ -0.93
BEST3-212ENST00000553096 CHMP5Q9NZZ3 219 aa9.23□□□□□ -0.93
BEST3-212ENST00000553096 KCNG1Q9UIX4 513 aa9.23□□□□□ -0.93
BEST3-212ENST00000553096 RLBP1P12271 317 aa9.23□□□□□ -0.93
BEST3-212ENST00000553096 HDGFP51858 240 aaKnown RBP9.23□□□□□ -0.93
BEST3-212ENST00000553096 CCDC61Q9Y6R9 512 aa9.23□□□□□ -0.93
BEST3-212ENST00000553096 SSH2Q76I76 1423 aa9.23□□□□□ -0.93
BEST3-212ENST00000553096 FSD2A1L4K1 749 aa9.22□□□□□ -0.93
BEST3-212ENST00000553096 CT47B1P0C2W7 299 aaPredicted RBP9.22□□□□□ -0.93
BEST3-212ENST00000553096 ANKLE2Q86XL3 938 aa9.22□□□□□ -0.93
BEST3-212ENST00000553096 BCL2L13Q9BXK5 485 aa9.22□□□□□ -0.93
BEST3-212ENST00000553096 PDZRN3Q9UPQ7 1066 aa9.22□□□□□ -0.93
BEST3-212ENST00000553096 USP6P35125 1406 aa9.22□□□□□ -0.93
BEST3-212ENST00000553096 MCM4P33991 863 aa9.22□□□□□ -0.93
BEST3-212ENST00000553096 MYH16Q9H6N6 1097 aa9.22□□□□□ -0.93
BEST3-212ENST00000553096 IL13P35225 146 aa9.21□□□□□ -0.93
BEST3-212ENST00000553096 DDX11L8A8MPP1 907 aa9.21□□□□□ -0.93
BEST3-212ENST00000553096 RRP9O43818 475 aaKnown RBP9.21□□□□□ -0.93
BEST3-212ENST00000553096 RRS1Q15050 365 aaKnown RBP9.21□□□□□ -0.93
BEST3-212ENST00000553096 PHACTR3Q96KR7 559 aa9.21□□□□□ -0.93
BEST3-212ENST00000553096 NUTM2FA1L443 756 aa9.21□□□□□ -0.94
BEST3-212ENST00000553096 PTMSP20962 102 aa9.21□□□□□ -0.94
BEST3-212ENST00000553096 MRE11P49959 708 aa9.21□□□□□ -0.94
BEST3-212ENST00000553096 PRKAR2BP31323 418 aa9.2□□□□□ -0.94
BEST3-212ENST00000553096 CLCN1P35523 988 aa9.2□□□□□ -0.94
BEST3-212ENST00000553096 RRAGDQ9NQL2 400 aaPredicted RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms